CK935174

Overview
NameCK935174
Unique NameCK935174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK935174 vs. ExPASy Swiss-Prot
Match: NLT22_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 30/90 (33.33%), Postives = 49/90 (54.44%), Query Frame = 2 
Query:  146 CGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPY-KISPSTDCSRV 412
            CG+V   + PC+ F++   + P   CCSG + L+   +TT  ++ AC C+  A   I GIK  + A +P +CG+      I+   DCS++
Sbjct:   35 CGKVVHHIMPCLKFVKGEEKEPSKSCCSGTKKLSEEVKTTEQKREACKCIVAATKGISGIKNELVAEVPKKCGITTTLPPITADFDCSKI 124
The following BLAST results are available for this feature:
BLAST of CK935174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
NLT22_PARJU9.125e-1133.33Probable non-specific lipid-transfer protein 2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004177_A09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DA0001_IIF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935174 ID=CK935174; Name=CK935174; organism=Citrus sinensis; type=EST; length=497bp
GGGACTCAAGCTTGTAAACAGAACCTGATAACTAGCTATAACCAAGCAAA
AGCCTCCCTGAAGAATCCTCATGGCTGCTCTTAAGCTTGTTTGTGCTTTG
CTTTTGTGCATTCTGGTGACTGCCCCGGTGACTAATGCCATAACATGCGG
GCAGGTGACAGCCTCCTTGGCTCCATGCATCCCTTTCTTGAGAACTGGAG
GGCGTTTTCCTCCACCGCCATGCTGTAGCGGCGTCAGGTCTCTCAACGGC
GCCGCCAGAACCACCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAACG
AGCTTACGGAACAATCCGCGGCATCAAACCTAATGTTGCCGCTGGCCTTC
CTAGTCAATGTGGAGTCAGAATTCCTTACAAGATCAGCCCCAGCACCGAC
TGCTCTAGGGTCAGGTGAAGTTGAGTTTGAGCTCTGTGACTTTCCAAGTA
TGATTGACTGAGAAGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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