CK935251

Overview
NameCK935251
Unique NameCK935251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACTY_DROME (Actin-like protein 53D OS=Drosophila melanogaster GN=Arp53D PE=2 SV=2)

HSP 1 Score: 341.273 bits (874), Expect = 4.239e-93
Identity = 167/266 (62.78%), Postives = 204/266 (76.69%), Query Frame = 2
Query:   59 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            +V DNG+G+ KAGF+ +D PRAVFPSIVGRPRH   ++     D+ +G+ A  KRGILTLKYPIEHG+V NWD+ME +W HT Y  LR  P + P LLTEAPLNPK NREKMT IMFE F  PA YVA+QAVLSLYA+GRT GIV+DSGDGV+HTVPIYEG+ALPHA +R+DLAGRDLTD L K+L ERG +  T+AEREIVR++KEKL Y++++Y +E++         ++YELPDGQ I +G ERFRCPE LF PS+   E  G
Sbjct:   14 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPIEHGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDL----HGKVETYELPDGQKIVLGCERFRCPEALFQPSLLGQEVMG 274          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACT_CRAVI (Actin (Fragment) OS=Crassostrea virginica PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 7.231e-93
Identity = 167/190 (87.89%), Postives = 179/190 (94.21%), Query Frame = 2
Query:  287 KIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            KIWHHTFYN LRVAPEEHPVLLTEAPLNPKANREKMT+IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYELPDGQVITIG ERFRCPE +F PS   ME+AG
Sbjct:    1 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAG 190          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACT1_OXYFA (Actin, macronuclear OS=Oxytricha fallax PE=3 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.233e-92
Identity = 166/261 (63.60%), Postives = 205/261 (78.54%), Query Frame = 2
Query:   47 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXP 829
            D Q  V DNG+G+VKAGFAG+DAPRAVFPSIVGRP++  A++G+     Y+GDEAQ KRG+L                  KIW+HTFY  LRV P+EHP+LLTEAPL+PK NREKMT+I+FETFN PA+YVAIQAVLSLY+ GRTTGIV D+GDG++HTVPIYEG+++PHA+  + LAGRDLT  L K+ TERGY+FT++AE EIVRD+KEKL ++AL+YE  L+ +  SS  EK+YELP G+VITIG+ERFRCPE LF P
Sbjct:    3 DQQTCVIDNGSGVVKAGFAGEDAPRAVFPSIVGRPKNVSALIGVDSASEYLGDEAQQKRGVL------------------KIWNHTFYVELRVQPDEHPILLTEAPLSPKTNREKMTQIIFETFNLPALYVAIQAVLSLYSRGRTTGIVCDAGDGLTHTVPIYEGFSIPHAVSTIQLAGRDLTTFLAKLFTERGYNFTSSAELEIVRDIKEKLCFLALNYESALKQSHDSSQFEKNYELPHGKVITIGSERFRCPEYLFKP 245          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACT_CALFI (Actin (Fragment) OS=Calanus finmarchicus PE=2 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 6.121e-92
Identity = 166/195 (85.13%), Postives = 178/195 (91.28%), Query Frame = 2
Query:  272 WDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            WDDMEKIWHHTFYN LRVAPEE PVLLTEAPLNPKANREKMT+IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSH VP+YEGYALPHAI+RLDLAGR+LT+ LMKILTERGYSFTTTAEREIVRD+KEKL Y ALD+EQE+ TA  S+++EKSYELPDGQVITIG ERFRCPE LF PS   MEA G
Sbjct:    1 WDDMEKIWHHTFYNELRVAPEELPVLLTEAPLNPKANREKMTQIMFETFNMPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHGVPVYEGYALPHAIVRLDLAGRELTNYLMKILTERGYSFTTTAEREIVRDIKEKLCYEALDFEQEMSTAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACG 195          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACT_EUPCR (Actin, cytoplasmic OS=Euplotes crassus PE=3 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 5.730e-90
Identity = 157/266 (59.02%), Postives = 203/266 (76.32%), Query Frame = 2
Query:   53 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVG-MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXME 847
            + +V DNG+G+VKAGFAG++ P +VFPS+V +P+    +VG  G KD +VGDE Q KRG+ TL YPI+ G++ +WD M+KIW +TFYN LR+  E HPVLLTEAPLNPK NRE M RIMFE ++ P+MY+ IQAVLSLY++GRTTGIV+DSGDGV+H VPI+EGY +PHAI ++ LAGRDLTD + +IL +  Y F TTAE+E VRD+KEKL Y+A DYE EL+ A     +E+SY LPDG+ + I  +RF+CPE LF P +   E
Sbjct:    9 EAIVVDNGSGVVKAGFAGENQPCSVFPSVVAKPKTKQVIVGGAGNKDCFVGDERQQKRGVCTLSYPIKSGMIKDWDGMQKIWDYTFYNELRIETENHPVLLTEAPLNPKQNRENMCRIMFEEYDFPSMYIQIQAVLSLYSAGRTTGIVVDSGDGVTHVVPIFEGYQIPHAIEKILLAGRDLTDYMCRILKDDDYHFETTAEKETVRDIKEKLCYVADDYEAELKKAGEGGELEESYALPDGRPLKISTQRFQCPEFLFQPDLGGRE 274          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACT_SPOLI (Actin (Fragment) OS=Spodoptera littoralis PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.476e-87
Identity = 153/163 (93.87%), Postives = 159/163 (97.55%), Query Frame = 2
Query:   68 DNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 556
            DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYN LRVAPEEHPVLLTEAPLNPKANREKMT+IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH
Sbjct:    2 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 164          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACTZ_PNECA (Actin-2 OS=Pneumocystis carinii PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.118e-85
Identity = 152/275 (55.27%), Postives = 203/275 (73.82%), Query Frame = 2
Query:   53 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALD---YEQELETAKTSS----AVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            QP+  DNG+G++KAGFAG+D P++ FPS VGRP+H   M G  + D ++G++AQ  RG+L +KYPIEHGIV +WDDME+IW   +   L+   EEHPVLLTEAPLNP+ NR++  ++ FETFN PA++ +IQAVLSLYASGRTTG+VLDSGDGV+H VPIYEG+A+P AI R+D+AGRD+T+ L  +L + G  F T+AE+EIVR +KEK +Y+ LD    E+E   A  S       E+ ++LPDG V+ +GAERFR PE+LF P +   E +G
Sbjct:   10 QPICIDNGSGVIKAGFAGEDQPKSFFPSYVGRPKHLKIMAGAIEGDIFIGNKAQELRGLLKIKYPIEHGIVVDWDDMERIWQFIYTEELKTVSEEHPVLLTEAPLNPRTNRDQAAQVFFETFNVPALFTSIQAVLSLYASGRTTGVVLDSGDGVTHAVPIYEGFAMPSAIRRIDIAGRDVTEYLQLLLRKSGTIFHTSAEKEIVRIIKEKCSYVTLDPRKEEKEWINASISGGKDYTKEEEFKLPDGNVLRLGAERFRAPEILFDPEIIGSEYSG 284          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACTZ_NEUCR (Actin-like protein OS=Neurospora crassa GN=ro-4 PE=3 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 9.466e-85
Identity = 150/279 (53.76%), Postives = 203/279 (72.76%), Query Frame = 2
Query:   32 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSK-RGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALD---YEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            M D+    P+V DNG+G ++AGFAGDD P+  FPS VGRP+H   + G  + + ++G +A S+ RG+L ++YP+EHGIV++WDDMEKIW + +   L+   EEHPVLLTE PLNP+ANR+   +I+FETFN PA+Y +IQAVLSLYASGRTTG+VLDSGDGVSH VP+Y+G+ +P++I R+D+AGRD+T+ L  +L + GY F T+AE+E+VR +KE + Y+A D    E+E   AK   A    Y LPDG  + IGAERFR PE+LF P +  +E  G
Sbjct:    1 MTDSLHNAPIVLDNGSGTIRAGFAGDDVPKCHFPSFVGRPKHLRVLAGALEGEVFIGQKAASELRGLLKIRYPLEHGIVTDWDDMEKIWAYVYDEGLKTLSEEHPVLLTEPPLNPRANRDTAAQILFETFNVPALYTSIQAVLSLYASGRTTGVVLDSGDGVSHAVPVYQGFTVPNSIRRIDVAGRDVTEYLQTLLRKSGYVFHTSAEKEVVRLIKESVTYVAHDPRKEEKEWAAAKMDPAKIAEYVLPDGNKLKIGAERFRAPEILFDPEIIGLEYPG 279          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACT27_DICDI (Putative actin-27 OS=Dictyostelium discoideum GN=act27 PE=3 SV=2)

HSP 1 Score: 313.538 bits (802), Expect = 9.466e-85
Identity = 160/261 (61.30%), Postives = 192/261 (73.56%), Query Frame = 2
Query:   47 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXP 829
            ++Q +V DNG+   KAGF G++AP + FPSIVG          + Q D+YVG+EAQSKRGILTLKYPIE GI++NWDDMEKIWHH FYN L VAPEE+ V+L+E+PLNP+ NREKM +IMFETF TPA+YV  QAV S+Y SGR TGIVLDSGD  SH VP+YEG ALPHA   L  AG DLTD +  +L + GY+     EREIVRD+KEKL+Y++ D+  E+    T   + KSYELPDGQVITI  E F CPEVLF P
Sbjct:    4 NVQAIVIDNGSDTCKAGFVGEEAPHSEFPSIVG----------IDQNDSYVGNEAQSKRGILTLKYPIERGIITNWDDMEKIWHHAFYNELGVAPEENIVVLSESPLNPEENREKMAQIMFETFKTPAIYVENQAVFSIYNSGRMTGIVLDSGDSASHVVPVYEGLALPHATSSLGFAGCDLTDQMSLLLNDLGYNL----EREIVRDIKEKLSYVSSDFSWEINDPST---LGKSYELPDGQVITIDKELFACPEVLFLP 247          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACT28_DICDI (Putative actin-28 OS=Dictyostelium discoideum GN=act28 PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.977e-83
Identity = 158/261 (60.54%), Postives = 192/261 (73.56%), Query Frame = 2
Query:   47 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXP 829
            ++Q +V DNG+   KAGF G++APR+ FPSIVG        +    KD+YVG+EAQSKRGILTLKYPIE GI++NWDDMEKIWHH FYN L VAPEE+ V+L+E+PLNP+ NREKM +IMFETF TPA+YV  QAV S+Y SGR TGIVLDSGD  SH VP+YEG ALP A   L  AG DLTD +  +L + GY+     EREIVRD+KEKL+Y++ D+  E++      ++EKSYELPDGQVITIG E   C E LF P
Sbjct:    4 NVQAIVIDNGSDTCKAGFVGEEAPRSEFPSIVG--------IDQNDKDSYVGNEAQSKRGILTLKYPIERGIITNWDDMEKIWHHAFYNELGVAPEENIVVLSESPLNPEENREKMAQIMFETFKTPAIYVENQAVFSIYNSGRMTGIVLDSGDSASHVVPVYEGLALPLATSSLGFAGCDLTDQMSLLLNDLGYNL----EREIVRDIKEKLSYVSSDFLWEID----DPSLEKSYELPDGQVITIGKELLACSEGLFLP 248          
The following BLAST results are available for this feature:
BLAST of CK935251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 488
Match NameE-valueIdentityDescription
ACTY_DROME4.239e-9362.78Actin-like protein 53D OS=Drosophila melanogaster ... [more]
ACT_CRAVI7.231e-9387.89Actin (Fragment) OS=Crassostrea virginica PE=2 SV=... [more]
ACT1_OXYFA1.233e-9263.60Actin, macronuclear OS=Oxytricha fallax PE=3 SV=1[more]
ACT_CALFI6.121e-9285.13Actin (Fragment) OS=Calanus finmarchicus PE=2 SV=1[more]
ACT_EUPCR5.730e-9059.02Actin, cytoplasmic OS=Euplotes crassus PE=3 SV=1[more]
ACT_SPOLI3.476e-8793.87Actin (Fragment) OS=Spodoptera littoralis PE=2 SV=... [more]
ACTZ_PNECA1.118e-8555.27Actin-2 OS=Pneumocystis carinii PE=2 SV=1[more]
ACTZ_NEUCR9.466e-8553.76Actin-like protein OS=Neurospora crassa GN=ro-4 PE... [more]
ACT27_DICDI9.466e-8561.30Putative actin-27 OS=Dictyostelium discoideum GN=a... [more]
ACT28_DICDI3.977e-8360.54Putative actin-28 OS=Dictyostelium discoideum GN=a... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_A04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935251 ID=CK935251; Name=CK935251; organism=Citrus sinensis; type=EST; length=860bp
TTTTTTTTTTTTAGAAATTCGAAGTTAGAAAATGGCAGATACTGAGGATA
TTCAGCCTCTTGTTTGTGACAATGGGACTGGAATGGTGAAGGCTGGATTT
GCCGGAGATGATGCTCCAAGAGCTGTGTTCCCCAGCATTGTGGGTCGCCC
TCGCCACACTGGAGCTATGGTTGGTATGGGTCAGAAAGATGCCTATGTTG
GTGATGAGGCTCAATCCAAAAGAGGTATTTTGACTTTGAAATACCCAATC
GAGCATGGCATTGTTAGCAACTGGGACGATATGGAGAAAATCTGGCATCA
CACATTTTATAATTAGCTTCGTGTGGCTCCGGAAGAGCATCCGGTTCTTC
TCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACACGG
ATTATGTTTGAGACCTTTAACACCCCTGCTATGTATGTTGCTATCCAGGC
TGTGCTTTCTCTCTATGCTAGCGGTCGTACAACTGGTATTGTTCTGGACT
CTGGAGATGGTGTCAGCCACACAGTTCCCATCTATGAAGGTTATGCCCTT
CCACACGCCATCCTCCGACTGGACCTGGCAGGTCGTGACCTTACAGACGC
CCTTATGAAAATCTTAACCGAGCGTGGTTATTCTTTCACCACAACTGCTG
AGCGGGAAATTGTTAGGGACATGAAGGAGAAATTAGCCTACATTGCTCTT
GACTATGAACAAGAGCTAGAGACAGCAAAGACCAGCTCAGCTGTGGAGAA
GAGCTATGAACTACCTGATGGGCAGGTCATCACTATTGGGGCTGAACGAT
TCAGGTGTCCAGAAGTCCTCTTCCNACCATCCATGNNNNGGATGGAAGCT
GCTGGCNNNN
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