CK935251

Overview
NameCK935251
Unique NameCK935251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ARP2_ORYSJ (Actin-related protein 2 OS=Oryza sativa subsp. japonica GN=ARP2 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 7.780e-71
Identity = 127/268 (47.39%), Postives = 180/268 (67.16%), Query Frame = 2
Query:   59 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            +VCDNGTG VK GFAG++ P +VFP +VGRP  R+  ++      D  VG      R  L + YP+ +GIV +WDDM  IW H FY+ L+V P E  +LLT+ PLNP  NREKM   MFE +N   +++ +QAVLSLYA G  TG+V+DSGDGV+H VP+ +G++ PH   R+++AGR +T  L+ +L+ RGY+   +A+ E VR++KEKL Y++ DY++E +    ++ + KSY LPDG+VI +G ERF+ PE LF P +  +E  G
Sbjct:    7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRGYAMNKSADFETVREIKEKLCYLSYDYKREYQLGLETTILVKSYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDG 274          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ARP2_ORYSI (Actin-related protein 2 OS=Oryza sativa subsp. indica GN=ARP2 PE=2 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 7.780e-71
Identity = 127/268 (47.39%), Postives = 180/268 (67.16%), Query Frame = 2
Query:   59 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            +VCDNGTG VK GFAG++ P +VFP +VGRP  R+  ++      D  VG      R  L + YP+ +GIV +WDDM  IW H FY+ L+V P E  +LLT+ PLNP  NREKM   MFE +N   +++ +QAVLSLYA G  TG+V+DSGDGV+H VP+ +G++ PH   R+++AGR +T  L+ +L+ RGY+   +A+ E VR++KEKL Y++ DY++E +    ++ + KSY LPDG+VI +G ERF+ PE LF P +  +E  G
Sbjct:    7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRGYAMNKSADFETVREIKEKLCYLSYDYKREYQLGLETTILVKSYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDG 274          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ARP2_YEAST (Actin-related protein 2 OS=Saccharomyces cerevisiae GN=ARP2 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 8.601e-70
Identity = 130/271 (47.97%), Postives = 180/271 (66.42%), Query Frame = 2
Query:   56 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP---RHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEH-PVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            P+V D GTG VK G AG++ P   FPSIVGRP       A V    KD  +GDEA   R  L + YP+E+GI+ NW DME +W + F+  +++    +  +LLTE P+NP  NREKM  +MFE ++   +YVAIQAVL+LYA G ++G+V+DSGDGV+H VP+YE   L H   RLD+AGRD+T  L+ +L+ RGY+F  TA+ E VR +KEKL Y++ D + + + A+ ++A+ +SYELPDG+ I +G ERF  PE LF P +  +E  G
Sbjct:    6 PIVLDQGTGFVKIGRAGENFPDYTFPSIVGRPILRAEERASVATPLKDIMIGDEASEVRSYLQISYPMENGIIKNWTDMELLWDYAFFEQMKLPSTSNGKILLTEPPMNPLKNREKMCEVMFEKYDFGGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLSHLTRRLDVAGRDVTRHLIDLLSRRGYAFNRTADFETVRQIKEKLCYVSYDLDLDTKLARETTALVESYELPDGRTIKVGQERFEAPECLFQPGLVDVEQPG 276          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACTT2_MOUSE (Actin-related protein T2 OS=Mus musculus GN=Actrt2 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.119e-68
Identity = 129/270 (47.78%), Postives = 181/270 (67.04%), Query Frame = 2
Query:   47 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            D   ++ DNG+G+ KAG +G+  PR V  S+VG P+      G  QK  +VG+EA  K+  L+L YPI+ G+V++WDD+EK+W H F   L V P E PVL+TE  LNP+ NREK   +MFETF  PA Y++ QAVL+LY+S   TG+V+DSGDGV+ TVPIYEGY+LPHA+ +L +AG+D+T+ L ++L   G +F    E+ +  D+KEKL Y+AL+ E+EL  ++ +  V + Y+LPDG VI IG + ++ PEVLF P        G
Sbjct:    8 DSPSVIFDNGSGLCKAGLSGEIGPRHVTSSVVGYPKFKAPPTGASQKKYFVGEEALYKQEALSLHYPIDRGLVTSWDDVEKLWRHLFEWELGVKPCERPVLVTEPSLNPRENREKTAEMMFETFEVPAFYLSDQAVLALYSSACVTGLVVDSGDGVTCTVPIYEGYSLPHAVSKLYVAGKDITELLTRLLLASGRAFPCPLEKALADDIKEKLCYVALEPEEEL--SRRAEDVLREYKLPDGNVIYIGDQLYQAPEVLFSPDQLGTHGPG 275          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACTT2_BOVIN (Actin-related protein T2 OS=Bos taurus GN=ACTRT2 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.614e-68
Identity = 123/270 (45.56%), Postives = 181/270 (67.04%), Query Frame = 2
Query:   47 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            D   ++ DNG+G+ KAG +G+  PR V  S+VG P+    + G  QK  +VG+EA  +  +L L YPIE G+++ W+DMEK+W H F   L V   + PVL+TE  LNP+  REKM  +MFE+FN PA Y++ QAVL+LYAS   TG+V+DSGDGV+ TVPI+EGY+LPHA+ +L +AGRD+T+ L ++L   G +F+   ++ +V D+KEKL Y+AL+ ++EL   +    V + Y+LPDG ++ IG + ++ PE LF P    ++  G
Sbjct:    8 DSPAVIFDNGSGLCKAGLSGEIGPRHVVSSVVGHPKFKTPLTGANQKKYFVGEEALHRHEVLQLHYPIERGLITGWEDMEKLWKHLFEWELGVKANDQPVLMTEPSLNPRETREKMAEVMFESFNVPAFYLSDQAVLALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLYVAGRDITEHLTRLLLASGRTFSCVLDKALVDDIKEKLCYVALEPDKEL--CRRPEEVLREYKLPDGNIVPIGDQLYQAPEALFSPEKLGIQNPG 275          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ARPM1_HUMAN (Actin-related protein M1 OS=Homo sapiens GN=ARPM1 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.059e-67
Identity = 123/267 (46.07%), Postives = 183/267 (68.54%), Query Frame = 2
Query:   56 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            P+V DNG+GM+KAG AG   P+ ++P+I+GR +   +    G  +  VGD+AQ  R  L + YP+E G++++W+DME +W H +   L++ P + PVL+TE  LNP ANR+++T + FE    PA Y++IQAVL+L+A+G TTG+VL+SG GV+ +VPI+EGY LPH + +LDLAG DLT+ LM ++   G    + ++R+IV D+KE   Y+A++YE+E+  AK    +EK Y+LPDG+VI +  + F CPE LF P    +EA G
Sbjct:    7 PVVIDNGSGMIKAGVAGCREPQFIYPNIIGRAKGQ-SRAAQGGLELCVGDQAQDWRSSLFISYPVERGLITSWEDMEIMWKHIYDYNLKLKPCDGPVLITEPALNPLANRQQITEMFFEHLGVPAFYMSIQAVLALFAAGFTTGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLAGLDLTNYLMVLMKNHGIMLLSASDRKIVEDIKESFCYVAMNYEEEM--AKKPDCLEKVYQLPDGKVIQLHDQLFSCPEALFSPCHMNLEAPG 270          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACT1_ABSGL (Actin-1 (Fragment) OS=Absidia glauca GN=ACT1 PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.983e-66
Identity = 120/140 (85.71%), Postives = 129/140 (92.14%), Query Frame = 2
Query:   32 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQA 451
            M+  E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G MVGMGQKD+YVGDEAQSKRGILTL+YPIEHGIV+NWDDMEKIWHHTFYN LRVAPEEHPVLLTEAPLNPK+NREKMT+IMFETFN PA YV+IQA
Sbjct:    1 MSMEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNAPAFYVSIQA 140          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ARP1_YEAST (Centractin OS=Saccharomyces cerevisiae GN=ARP1 PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 7.535e-66
Identity = 121/264 (45.83%), Postives = 188/264 (71.21%), Query Frame = 2
Query:   53 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAP-EEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL-MKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET-AKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSM 835
            QP+V DNG+G++KAGF+G++ P+A+   +VG  ++   M+   Q D ++G+ AQ  RG+L L+YPI+HG+V +WD ME IW +     L++    EHP+L+TEAP+NP  NRE+M +++FETF+  A+YV+  AVLSLYASGRTTG V+D G+G   TVPIY+G+ALP +++R+D+ G D+T+ L  ++    G S  +++EREIVR MKEK+ Y+A + ++E E   + +  +  +++LPDG+ I +G +R+R PE+LF P +
Sbjct:   13 QPVVIDNGSGIIKAGFSGEERPKALEYCLVGNTKYDKVMLEGLQGDTFIGNNAQKLRGLLKLRYPIKHGVVEDWDSMELIWSYVLNEVLQLQNIGEHPLLITEAPMNPLKNREQMAQVLFETFDVSALYVSNPAVLSLYASGRTTGCVVDCGEGYCSTVPIYDGFALPASMMRMDIGGADITEQLQFQLRKSAGVSLFSSSEREIVRTMKEKVCYLAKNIKKEEEKYLQGTQDLISTFKLPDGRCIEVGNDRYRAPEILFSPQI 276          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: ACTT2_MACFA (Actin-related protein T2 OS=Macaca fascicularis GN=ACTRT2 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.679e-65
Identity = 122/270 (45.19%), Postives = 177/270 (65.56%), Query Frame = 2
Query:   47 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFXPSMXXMEAAG 856
            D   ++ DNG+G+ KAG +G+  PR +  SIVG  +      G  QK  +VG+EA  K   L L  PIE G+++ WDDME++W H F   L V P + P+L TE  LNP+ NREKM  +MFE F  PA Y++ QAVL+LYAS   TG+V+DSGDGV+ TVPI+EGY+LPHA+ +L +AGRD+T+ L ++L   G++F+   ++ +V D+K+KL Y+AL+ E+EL  ++    V + Y+LPDG +I++G    + PE LF P     ++ G
Sbjct:    8 DSPAVIFDNGSGLCKAGLSGEFGPRHIVSSIVGHLKFQAPSAGANQKKYFVGEEALYKLEALQLHSPIERGLITGWDDMERLWKHLFEWELGVKPSDQPLLATEPSLNPRENREKMAEVMFENFGVPAFYLSDQAVLALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLHVAGRDITELLTQLLLASGHTFSCELDKGLVDDIKKKLCYVALEPEKEL--SRRPEEVLREYKLPDGNIISLGDPLCQAPEALFAPQQLGCQSPG 275          
BLAST of CK935251 vs. ExPASy Swiss-Prot
Match: FGR_FSVGR (Tyrosine-protein kinase transforming protein Fgr OS=Feline sarcoma virus (strain Gardner-Rasheed) GN=V-FGR PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.884e-65
Identity = 117/133 (87.97%), Postives = 124/133 (93.23%), Query Frame = 2
Query:   44 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGAMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYN*LRVAPEEHPVLLTEAPLNPKANREKMTRIMFETFNTPAMYVA 442
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYN LRVAPEEHPVLLTEAPLNPKANREKMT+IMFETFN P+ YVA
Sbjct:   25 EEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNIPSNYVA 157          
The following BLAST results are available for this feature:
BLAST of CK935251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 488
Match NameE-valueIdentityDescription
ARP2_ORYSJ7.780e-7147.39Actin-related protein 2 OS=Oryza sativa subsp. jap... [more]
ARP2_ORYSI7.780e-7147.39Actin-related protein 2 OS=Oryza sativa subsp. ind... [more]
ARP2_YEAST8.601e-7047.97Actin-related protein 2 OS=Saccharomyces cerevisia... [more]
ACTT2_MOUSE2.119e-6847.78Actin-related protein T2 OS=Mus musculus GN=Actrt2... [more]
ACTT2_BOVIN3.614e-6845.56Actin-related protein T2 OS=Bos taurus GN=ACTRT2 P... [more]
ARPM1_HUMAN3.059e-6746.07Actin-related protein M1 OS=Homo sapiens GN=ARPM1 ... [more]
ACT1_ABSGL1.983e-6685.71Actin-1 (Fragment) OS=Absidia glauca GN=ACT1 PE=3 ... [more]
ARP1_YEAST7.535e-6645.83Centractin OS=Saccharomyces cerevisiae GN=ARP1 PE=... [more]
ACTT2_MACFA1.679e-6545.19Actin-related protein T2 OS=Macaca fascicularis GN... [more]
FGR_FSVGR4.884e-6587.97Tyrosine-protein kinase transforming protein Fgr O... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_A04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935251 ID=CK935251; Name=CK935251; organism=Citrus sinensis; type=EST; length=860bp
TTTTTTTTTTTTAGAAATTCGAAGTTAGAAAATGGCAGATACTGAGGATA
TTCAGCCTCTTGTTTGTGACAATGGGACTGGAATGGTGAAGGCTGGATTT
GCCGGAGATGATGCTCCAAGAGCTGTGTTCCCCAGCATTGTGGGTCGCCC
TCGCCACACTGGAGCTATGGTTGGTATGGGTCAGAAAGATGCCTATGTTG
GTGATGAGGCTCAATCCAAAAGAGGTATTTTGACTTTGAAATACCCAATC
GAGCATGGCATTGTTAGCAACTGGGACGATATGGAGAAAATCTGGCATCA
CACATTTTATAATTAGCTTCGTGTGGCTCCGGAAGAGCATCCGGTTCTTC
TCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACACGG
ATTATGTTTGAGACCTTTAACACCCCTGCTATGTATGTTGCTATCCAGGC
TGTGCTTTCTCTCTATGCTAGCGGTCGTACAACTGGTATTGTTCTGGACT
CTGGAGATGGTGTCAGCCACACAGTTCCCATCTATGAAGGTTATGCCCTT
CCACACGCCATCCTCCGACTGGACCTGGCAGGTCGTGACCTTACAGACGC
CCTTATGAAAATCTTAACCGAGCGTGGTTATTCTTTCACCACAACTGCTG
AGCGGGAAATTGTTAGGGACATGAAGGAGAAATTAGCCTACATTGCTCTT
GACTATGAACAAGAGCTAGAGACAGCAAAGACCAGCTCAGCTGTGGAGAA
GAGCTATGAACTACCTGATGGGCAGGTCATCACTATTGGGGCTGAACGAT
TCAGGTGTCCAGAAGTCCTCTTCCNACCATCCATGNNNNGGATGGAAGCT
GCTGGCNNNN
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