CK935286

Overview
NameCK935286
Unique NameCK935286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.219e-29
Identity = 63/99 (63.64%), Postives = 70/99 (70.71%), Query Frame = 3
Query:   45 MAKDIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            MAKD+E  G   F  +DY DPPP P  DA+ELT+WS YRA IAEF+ATLLFLYITVLTVIGYK Q+D               IAWAFGGMIF+LVYCTA
Sbjct:    1 MAKDVE--GPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTA 97          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.080e-29
Identity = 63/99 (63.64%), Postives = 71/99 (71.72%), Query Frame = 3
Query:   45 MAKDIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            M K++ VG +  F  KDY DPPP PL DA EL +WSFYRA IAEFIATLLFLY+T++TVIGYKSQTD               IAWAFGGMIF+LVYCTA
Sbjct:    1 MTKEV-VGDKRSFSGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTA 98          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.080e-29
Identity = 71/104 (68.27%), Postives = 74/104 (71.15%), Query Frame = 3
Query:   45 MAKD--IEVGGQ-GEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTD--ANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            M KD  +E GG  GEF AKDY DPPPAPLIDA EL  WS YRA IAEFIATLLFLYITV TVIGYK QTD  A+             IAWAFGGMIF+LVYCTA
Sbjct:    1 MGKDEVMESGGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTA 104          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.051e-29
Identity = 69/106 (65.09%), Postives = 72/106 (67.92%), Query Frame = 3
Query:   45 MAKDIEV---GGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDAN----HXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            M KD  V    G GEF AKDY DPPPAPL+DA EL  WS YRA IAEFIATLLFLY+TV TVIGYK QTDA+                 IAWAFGGMIFVLVYCTA
Sbjct:    1 MGKDDVVQSGAGGGEFAAKDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTA 106          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.141e-27
Identity = 61/101 (60.40%), Postives = 71/101 (70.30%), Query Frame = 3
Query:   45 MAKDIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDA--NHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            M K+++V       A+DY DPPPAPL+D +EL +WS YRA IAEF+ATLLFLY+TV TVIGYK QTDA  N             IAWAFGGMIF+LVYCTA
Sbjct:    1 MGKEVDVSTLEAGGARDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTA 101          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.336e-27
Identity = 60/98 (61.22%), Postives = 69/98 (70.41%), Query Frame = 3
Query:   54 DIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTD--ANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            D+E GG      +DY DPPPAPL+D +EL +WS YRA IAEF+ATLLFLY+TV TVIGYK QTD  A+             IAWAFGGMIF+LVYCTA
Sbjct:    6 DVEAGG-----VRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTA 98          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.262e-26
Identity = 62/103 (60.19%), Postives = 71/103 (68.93%), Query Frame = 3
Query:   45 MAKDIEVGG--QGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTD--ANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            M K+++V     G    +DY DPPPAPLID +EL +WS YRA IAEF+ATLLFLYITV TVIGYK QTD  A+             IAWAFGGMIF+LVYCTA
Sbjct:    1 MGKEVDVSTLEAGGVRDRDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTA 103          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.152e-26
Identity = 59/99 (59.60%), Postives = 67/99 (67.68%), Query Frame = 3
Query:   45 MAKDIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            M KD E+  +     KDY DPPP    +  EL +WSFYRA IAEFIATLLFLY+TVLTVIG+KSQTD N             I+WAFGGMIF+LVYCTA
Sbjct:    1 MTKD-ELTEEESLSGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTA 98          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.262e-26
Identity = 61/99 (61.62%), Postives = 69/99 (69.70%), Query Frame = 3
Query:   45 MAKDIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            M+K++   G+   H KDY DPPPAPL+D  EL  WSFYRA IAEFIATLLFLY+TV TVIG+K+QT                IAWAFGGMIFVLVYCTA
Sbjct:    1 MSKEVSEEGR---HGKDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQT------GPCGGVGLLGIAWAFGGMIFVLVYCTA 90          
BLAST of CK935286 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.262e-26
Identity = 61/99 (61.62%), Postives = 68/99 (68.69%), Query Frame = 3
Query:   45 MAKDIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTA 341
            M+K++   G+   H KDY DPPPAPL+D  EL  WSFYRA IAEFIATLLFLY+TV TVIG+K QT                IAWAFGGMIFVLVYCTA
Sbjct:    1 MSKEVSEEGKTH-HGKDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQT------GPCDGVGLLGIAWAFGGMIFVLVYCTA 92          
The following BLAST results are available for this feature:
BLAST of CK935286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PIP22_ARATH1.219e-2963.64Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP25_ARATH2.080e-2963.64Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP21_ORYSJ2.080e-2968.27Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP22_MAIZE6.051e-2965.09Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP24_ORYSJ1.141e-2760.40Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP25_ORYSJ4.336e-2761.22Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP26_MAIZE1.262e-2660.19Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP26_ARATH2.152e-2659.60Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP28_ARATH6.262e-2661.62Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP27_ARATH6.262e-2661.62Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_D09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935286 ID=CK935286; Name=CK935286; organism=Citrus sinensis; type=EST; length=342bp
TTTTTTTTTTTTTTTAAATTCTCAGTGAAGACCAATCCGTAGCAATGGCC
AAGGACATTGAGGTTGGTGGGCAAGGCGAGTTCCATGCTAAGGATTACCA
TGACCCTCCGCCAGCTCCATTGATCGATGCCGAGGAGCTCACCCAATGGT
CATTTTACAGGGCTACTATAGCTGAGTTCATCGCCACGCTCTTGTTTTTG
TACATTACTGTGCTGACAGTGATTGGTTACAAAAGCCAGACGGACGCCAA
CCACGGCGGTGACGGATGTGGTGGTGTTGGCATTCTGGGCATCGCTTGGG
CCTTTGGTGGCATGATCTTTGTTCTTGTTTACTGCACTGCTG
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