CK935309

Overview
NameCK935309
Unique NameCK935309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935309 vs. ExPASy Swiss-Prot
Match: YIPP_DROME (Protein yippee OS=Drosophila melanogaster GN=Yippee PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 1
Query:  142 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILE 417
            G   F+C  C   L     LIS  F   TG+AY+F   +N+     +++ M+TG + +  + C NCG +LGW Y  A +  QK+KEG  ILE
Sbjct:   11 GLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVILE 102          
BLAST of CK935309 vs. ExPASy Swiss-Prot
Match: YPEL5_PONAB (Protein yippee-like 5 OS=Pongo abelii GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  142 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 420
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK935309 vs. ExPASy Swiss-Prot
Match: YPEL5_MOUSE (Protein yippee-like 5 OS=Mus musculus GN=Ypel5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  142 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 420
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK935309 vs. ExPASy Swiss-Prot
Match: YPEL5_HUMAN (Protein yippee-like 5 OS=Homo sapiens GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  142 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 420
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK935309 vs. ExPASy Swiss-Prot
Match: YPEL5_CERAE (Protein yippee-like 5 OS=Cercopithecus aethiops GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  142 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 420
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK935309 vs. ExPASy Swiss-Prot
Match: YPEL5_BOVIN (Protein yippee-like 5 OS=Bos taurus GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  142 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 420
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK935309 vs. ExPASy Swiss-Prot
Match: YPEL5_MACFA (Protein yippee-like 5 OS=Macaca fascicularis GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  142 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 420
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDAILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK935309 vs. ExPASy Swiss-Prot
Match: YPL2_CAEEL (Protein yippee-like B0546.4 OS=Caenorhabditis elegans GN=B0546.4 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12
Identity = 35/88 (39.77%), Postives = 47/88 (53.41%), Query Frame = 1
Query:  154 FSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILE 417
            + C  C   L    +L SK F   TG A +F  A NVV GR E ++M TG +T+  ++C  C Q+LGW Y  A    Q +KE   I+E
Sbjct:   16 YGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRCEHRKMTTGWHTVRDVFCVTCNQKLGWMYEMAVSESQTYKETQVIIE 103          
BLAST of CK935309 vs. ExPASy Swiss-Prot
Match: YIPL_SCHPO (Protein yippee-like PJ691.02 OS=Schizosaccharomyces pombe GN=SPAPJ691.02 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11
Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 1
Query:  154 FSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILE 417
            + C  C   LAF   L+S  ++ + G A +F    NV+    + +QM TG + +  I+C  C   +GW Y+ +Y+  QK+K+G++ILE
Sbjct:   14 YVCAKCKTHLAFKGHLLSHDYRGKNGPACLFKRVENVIEMEPKTEQMSTGRFIVRHIHCCRCHTYIGWKYVSSYEPSQKFKDGHYILE 101          
The following BLAST results are available for this feature:
BLAST of CK935309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
YIPP_DROME1.712e-1338.04Protein yippee OS=Drosophila melanogaster GN=Yippe... [more]
YPEL5_PONAB2.236e-1337.63Protein yippee-like 5 OS=Pongo abelii GN=YPEL5 PE=... [more]
YPEL5_MOUSE2.236e-1337.63Protein yippee-like 5 OS=Mus musculus GN=Ypel5 PE=... [more]
YPEL5_HUMAN2.236e-1337.63Protein yippee-like 5 OS=Homo sapiens GN=YPEL5 PE=... [more]
YPEL5_CERAE2.236e-1337.63Protein yippee-like 5 OS=Cercopithecus aethiops GN... [more]
YPEL5_BOVIN2.236e-1337.63Protein yippee-like 5 OS=Bos taurus GN=YPEL5 PE=2 ... [more]
YPEL5_MACFA3.814e-1337.63Protein yippee-like 5 OS=Macaca fascicularis GN=YP... [more]
YPL2_CAEEL5.508e-1239.77Protein yippee-like B0546.4 OS=Caenorhabditis eleg... [more]
YIPL_SCHPO2.093e-1134.09Protein yippee-like PJ691.02 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_C02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935309 ID=CK935309; Name=CK935309; organism=Citrus sinensis; type=EST; length=680bp
GGGGATTTGTTAATTGCCTTAAATAATTGAGTCCTCATCATAATTTTCNC
NNNAAATAATGCCCTCTTCTCCTCTCATCTGTTGTTGGTTCCAGTCTTAA
GCAGATCAGTTTTTGGTTTCAGTTAAATGGCAGAGTTCGATGGTCGTCCC
TTCTTCAGTTGCAGAAATTGTCTTAATCCACTTGCCTTTCACCATGATCT
TATTTCCAAAACTTTTAAGGCACAAACAGGACAGGCCTACATGTTTAGTA
ATGCAATGAATGTAGTTCTGGGAAGAAAGGAGGATAAGCAAATGATAACA
GGCATTTACACAATTGCCAAAATCTATTGCAGCAATTGTGGGCAGGAATT
GGGTTGGCATTATTTGCGAGCTTATGATCTCAAACAAAAATGGAAGGAAG
GCAATTTCATTCTCGAGAAATTCAAGATGCTTAAAGAATACAAGTAGCCC
TCTATTTTATTGCAACAAAATAATGCCATCAAAGCAAGTTTTCAAGTTCT
ATGCAAGTATGTATGTGTGTGTGTGCATCTTGGACTTGGAAGAAAATTTG
TGTACTCCATGCACTTCTTTCATTAGATGTATGCATATAATAAGAGTTTA
TTGAAAGAGAGTGTATACATGAAGGGGTAATCAAATTTTTCTCGTATCTT
AAAGAAAAAAAAAAAAAAAAAAAAAAAAAA
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