CK935484

Overview
NameCK935484
Unique NameCK935484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10102 contig Csv1_Contig10102:1..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935484 vs. ExPASy Swiss-Prot
Match: KS1_ORYSJ (Ent-kaur-16-ene synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=KS1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 62/219 (28.31%), Postives = 116/219 (52.97%), Query Frame = 2
Query:  296 LQLIDAIQRLGVSYHFESEVDEILGKMHKASQDSDLCNNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSL---AKDVRGMLSLYEATHLGVHE-EDILDEALAFTTSHL-ESIATHQI-RSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQEES----------PH-NEALLTFAKLDFNKLQKLHQKELGDISRWWKELDFAHKLPF 901
            L  +DA++++G+S +F SE+  IL   + +  + D       ++   ++ FRLLR NGY +S+       +   +F+ SL     D + ++ LY+A+ +   E E ILD   +++ S L ES+ ++ + ++P+ E++K+AL  P +  L RL+ ++ I  +  +           PH N+ +L  A  DF+  Q ++Q EL  +  W K+ +   +LPF
Sbjct:  243 LSWVDALEKMGISQYFVSEIKSILDTTYVSWLERD--EEIMLDITTCAMAFRLLRMNGYHVSSVELSPVAEA-SSFRESLQGYLNDKKSLIELYKASKVSKSENESILDSIGSWSGSLLKESVCSNGVKKAPIFEEMKYALKFPFYTTLDRLDHKRNIERFDAKDSQMLKTEYLLPHANQDILALAVEDFSSSQSIYQDELNYLECWVKD-EKLDQLPF 457          
BLAST of CK935484 vs. ExPASy Swiss-Prot
Match: KSL6_ORYSJ (Ent-isokaur-15-ene synthase OS=Oryza sativa subsp. japonica GN=KSL6 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.462e-14
Identity = 59/231 (25.54%), Postives = 117/231 (50.65%), Query Frame = 2
Query:  296 LQLIDAIQRLGVSYHFESEVDEILGKMHKASQDSDLCNNEND---ELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSL---AKDVRGMLSLYEATHLGVHEEDILDEALAFTTSH--LESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQEESP-----------------HNEALLTFAKLDFNKLQKLHQKELGDISRW-----WKELDFAHKLP 898
            L ++D ++R+G+S  F  E+ +IL   ++        +NE +   ++   ++ FRLLR +GY I++D   +F +   +F  S+     D + +L LY+++ L   E+D++ E +   ++   LE I++  I    + +V++AL  P++  L+RLE ++ I  ++ +                    N+ +L  A  +F+  Q ++Q+EL D++ W       EL FA  +P
Sbjct:  300 LCMVDTLERMGISESFACEISDILDMTYRLWM-----HNEEELMLDMRTCAMAFRLLRMHGYDITSDGMAQFVE-QSSFDDSIHGYLNDTKALLELYKSSQLRCLEDDLILEEIGSWSARVLLEKISSKMIHISELPEVEYALKCPVYAILERLEQKRNIEQFKTKEQLKIEGFKLLKSGYRGVIPNDEILALAVDEFHSSQSVYQQELQDLNSWVAHTRLDELKFARLMP 524          
BLAST of CK935484 vs. ExPASy Swiss-Prot
Match: KSL4_ORYSI (Syn-pimara-7,15-diene synthase OS=Oryza sativa subsp. indica GN=KSL4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 66/220 (30.00%), Postives = 107/220 (48.64%), Query Frame = 2
Query:  296 LQLIDAIQRLGVSYHFESEVDEILGKMHKASQDSDLCNNENDELYYISLHFRLLRQNGYKISADVFKKFKD--TDGNFKTSLAKDVRGMLSLYEATHLGVHE-EDILDEALAFTTSHL-ESIATHQIR-SPLVEQVKHALVQPIHRGLQRL---------EARQYIPIYQEESP--HNEALLTFAKLDFNKLQKLHQKELGDISRWWKE-----LDFAHK 892
            L ++D +  +G+S HF S++  IL K +      D       +L   ++ FRLLR NGY +S+D      +  T  N       D + +L LY+A+ + + E E IL++   ++ S L E + +  IR +P++ +V++AL  P +  L+ L         +AR Y  I  +  P   NE LL  A  DF+  Q  +Q E+  +  W KE     L+F  K
Sbjct:  336 LSMVDTLVNIGISRHFSSDIKRILDKTYILWSQRD--EEVMLDLPTCAMAFRLLRMNGYGVSSDDLSHVAEASTFHNSVEGYLDDTKSLLELYKASKVSLSENEPILEKMGCWSGSLLKEKLCSDDIRGTPILGEVEYALKFPFYATLEPLDHKWNIENFDARAYQKIKTKNMPCHVNEDLLALAAEDFSFCQSTYQNEIQHLESWEKENKLDQLEFTRK 553          
BLAST of CK935484 vs. ExPASy Swiss-Prot
Match: KSL5_ORYSJ (Ent-pimara-8(14),15-diene synthase OS=Oryza sativa subsp. japonica GN=KSL5 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.331e-12
Identity = 56/232 (24.14%), Postives = 118/232 (50.86%), Query Frame = 2
Query:  296 LQLIDAIQRLGVSYHFESEVDEILGKMHKASQDSDLCNNEND---ELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSL---AKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHL--ESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQEES------------------PHNEALLTFAKLDFNKLQKLHQKELGDISRW-----WKELDFAHKLP 898
            L ++D ++++G+S +F  E+ +IL  +++        +NE +   ++   ++ FRLLR +GY IS+D   +F +   +F  S+     D + +L LY ++ +   E+D++ + +   ++ +  E I++       + +V++AL  P++  L+RLE ++ I  ++ +                    H+E +L  A  +F+  Q ++Q+EL D++ W       EL FA  +P
Sbjct:  298 LGMVDTLEKMGISNNFSCEISDILDMIYRL-----WIHNEEELMLDMGTCAMAFRLLRMHGYDISSDGMAQFVE-QSSFDDSIHGYLNDTKALLELYRSSQIRCLEDDLILQDIGSWSARVLQEKISSKMTHKSEMLEVEYALKFPVYATLERLEQKRNIEQFKTKEQLKIEGFKLLKSGYRGAITHDE-ILALAVDEFHSSQSVYQQELQDLNSWVAQTRLDELKFARLMP 522          
BLAST of CK935484 vs. ExPASy Swiss-Prot
Match: KSL10_ORYSJ (Ent-sandaracopimara-8(14),15-diene synthase OS=Oryza sativa subsp. japonica GN=KSL10 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.044e-12
Identity = 59/222 (26.58%), Postives = 110/222 (49.55%), Query Frame = 2
Query:  305 IDAIQRLGVSYHFESEVDEILGKMHKASQDSDLCNNENDELYYI---SLHFRLLRQNGYKISADVFKKFKDTDGNFKTSL---AKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHL--ESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQEE-----------SPHNEALLTFAKLDFNKLQKLHQKELGDISRWWK-----ELDFAHKLP 898
            +DA++R G+S  F  E+ +IL   +++       +NE + +  I   ++ FRLLR +GY I++D    F +   +F  S+     D + +L L++ + +    ED++ E +   ++ L  + + ++++ +    +V++ L  P+H  L RLE R+ I  ++ E           S  NE +L  A   F+  Q ++Q+EL     W K     EL FA  +P
Sbjct:  301 VDALERTGISQKFAREIRDILDTTYRS-----WLHNEEEVMLDIPTCAMAFRLLRTHGYDITSDEMAHFSE-QSSFDDSIHGYLNDTKTLLELFKTSQIRFSCEDLVLENIGTWSAKLLKQQLLSNKLSTSAQSEVEYVLKFPLHSTLDRLEHRRNIEQFKVEGSKVLKSGYCGSHSNEEILALAVDYFHSSQSVYQQELKYFESWVKQCRLDELKFARVMP 516          
BLAST of CK935484 vs. ExPASy Swiss-Prot
Match: KSL5_ORYSI (Ent-isokaur-15-ene synthase OS=Oryza sativa subsp. indica GN=KSL5 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.975e-12
Identity = 57/232 (24.57%), Postives = 117/232 (50.43%), Query Frame = 2
Query:  296 LQLIDAIQRLGVSYHFESEVDEILGKMHKASQDSDLCNNEND---ELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSL---AKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHL--ESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQEES------------------PHNEALLTFAKLDFNKLQKLHQKELGDISRW-----WKELDFAHKLP 898
            L ++D ++++G+S +F  E+ +IL  +++        +NE +   E+   ++ FRLLR +GY IS+D   +F +   +F  S+     D + +L LY ++ +   E+D++ + +   ++ +  E I++       +  V++AL  P++  L+RLE ++ I  ++ +                    H+E +L  A  +F+  Q ++Q+EL D++ W       EL FA  +P
Sbjct:  298 LCMVDTLEKMGISNNFSCEISDILDMIYRL-----WIHNEEELMLEMGTCAMAFRLLRMHGYDISSDGMAQFVE-QSSFDDSIHGYLNDTKALLELYRSSQIRCLEDDLILQDIGSWSARVLQEKISSKMTHKSEMLGVEYALKFPVYATLERLEQKRNIEQFKTKEQLKIEGFKLLKSGYRGAITHDE-ILALAVDEFHSSQSVYQQELQDLNSWVAHTRLDELKFARLMP 522          
BLAST of CK935484 vs. ExPASy Swiss-Prot
Match: KSL7_ORYSJ (Ent-cassa-12,15-diene synthase OS=Oryza sativa subsp. japonica GN=KSL7 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 55/218 (25.23%), Postives = 105/218 (48.17%), Query Frame = 2
Query:  296 LQLIDAIQRLGVSYHFESEVDEILGKMHKA--SQDSDLCNNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSL---AKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHL--ESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQEESPH-----------NEALLTFAKLDFNKLQKLHQKELGDISRWWKE--LDFAH 889
            L ++DA++ +G+S +F SE+  IL   + +   +D ++      ++   ++ FRLLR NGY +S+D         G F+ SL     D + +L +Y+ +   + E D++ +++   +  L  E + ++   +P  E+++ AL  P +  L+RL  R+ I ++  +              ++  L  A  DF   Q  +Q EL  +  W K+  LD  H
Sbjct:  324 LSMVDALENMGISQYFASEIKSILDMTYSSWLGKDEEIML----DVTTCAMAFRLLRMNGYDVSSDELSHVAGASG-FRDSLQGYLNDRKSVLEVYKTSKHSISENDLILDSIGSWSGSLLKEMLCSNGKGTPGREEIEFALKYPFYSTLERLVHRKNIVLFDAKGSQMLKTECMPVHDSQDFLALAVDDFCISQSNYQNELNYLESWVKDNRLDQLH 536          
BLAST of CK935484 vs. ExPASy Swiss-Prot
Match: KSL7_ORYSI (Ent-cassa-12,15-diene synthase OS=Oryza sativa subsp. indica GN=KSL7 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.497e-11
Identity = 56/219 (25.57%), Postives = 107/219 (48.86%), Query Frame = 2
Query:  296 LQLIDAIQRLGVSYHFESEVDEILGKMHKA--SQDSDLCNNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSL---AKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHL--ESIATHQIR-SPLVEQVKHALVQPIHRGLQRLEARQYIPIYQEESPH-----------NEALLTFAKLDFNKLQKLHQKELGDISRWWKE--LDFAH 889
            L ++DA++ +G+S +F SE+  IL   + +   +D ++      ++   ++ FRLLR NGY +S+D         G F+ SL     D + +L +Y+ +   + E D++ +++   +  L  E + ++ I+ +P  E+++ AL  P +  L+RL  R+ I ++  +              ++  L  A  DF   Q  +Q EL  +  W K+  LD  H
Sbjct:  324 LSMVDALENMGISQYFASEIKSILDMTYSSWLGRDEEIML----DVTTCAMAFRLLRMNGYDVSSDELSHVAGASG-FRDSLQGYLNDRKSVLEVYKTSKHSISENDLILDSIGSWSGSLLKEMLCSNGIQGTPGREEIEFALKYPFYSTLERLVHRKNIVLFDAKGSQMLKTECMPVHDSQDFLALAVDDFCISQSNYQNELNYLESWVKDNRLDQLH 537          
BLAST of CK935484 vs. ExPASy Swiss-Prot
Match: CPS4_ORYSJ (Syn-copalyl diphosphate synthase OS=Oryza sativa subsp. japonica GN=CPS4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 61/219 (27.85%), Postives = 95/219 (43.38%), Query Frame = 2
Query:  296 LQLIDAIQRLGVSYHFESEVDEILGKMHKASQDSDLCNNEN---DELYYISLHFRLLRQNGYKISADVFKKFKDTDGNF----KTSLAKDVRGMLSLYEATHLGVHEED-ILDEALAFTTSHLESIATHQ-------IRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQEESP-------------HNEALLTFAKLDFNKLQKLHQKELGDISRWW 868
            L  +D + RLG+S HF SE+++ L  + +      L + +N    ++   ++ FRLLR  GY++   V KKF + DG F      S    V  M + Y A+ L    +D +L  A  F  S L+             I   +  +V++A+  P    L R+E R Y+  Y                   N+  L  AK DF+  QK  + EL  + RW+
Sbjct:  320 LWAVDRLTRLGISRHFTSEIEDCLDYIFRNWTPDGLAHTKNCPVKDIDDTAMGFRLLRLYGYQVDPCVLKKF-EKDGKFFCLHGESNPSSVTPMYNTYRASQLKFPGDDGVLGRAEVFCRSFLQDRRGSNRMKDKWAIAKDIPGEVEYAMDYPWKASLPRIETRLYLDQYGGSGDVWIGKVLHRMTLFCNDLYLKAAKADFSNFQKECRVELNGLRRWY 537          
BLAST of CK935484 vs. ExPASy Swiss-Prot
Match: CPS4_ORYSI (Syn-copalyl diphosphate synthase OS=Oryza sativa subsp. indica GN=CPS4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 61/219 (27.85%), Postives = 95/219 (43.38%), Query Frame = 2
Query:  296 LQLIDAIQRLGVSYHFESEVDEILGKMHKASQDSDLCNNEN---DELYYISLHFRLLRQNGYKISADVFKKFKDTDGNF----KTSLAKDVRGMLSLYEATHLGVHEED-ILDEALAFTTSHLESIATHQ-------IRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQEESP-------------HNEALLTFAKLDFNKLQKLHQKELGDISRWW 868
            L  +D + RLG+S HF SE+++ L  + +      L + +N    ++   ++ FRLLR  GY++   V KKF + DG F      S    V  M + Y A+ L    +D +L  A  F  S L+             I   +  +V++A+  P    L R+E R Y+  Y                   N+  L  AK DF+  QK  + EL  + RW+
Sbjct:  320 LWAVDRLTRLGISRHFTSEIEDCLDYIFRNWTPDGLAHTKNCPVKDIDDTAMGFRLLRLYGYQVDPCVLKKF-EKDGKFFCLHGESNPSSVTPMYNTYRASQLKFPGDDGVLGRAEVFCRSFLQDRRGSNRMKDKWAIAKDIPGEVEYAMDYPWKASLPRIETRLYLDQYGGSGDVWIGKVLHRMTLFCNDLYLKAAKADFSNFQKECRVELNGLRRWY 537          
The following BLAST results are available for this feature:
BLAST of CK935484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
KS1_ORYSJ7.245e-1428.31Ent-kaur-16-ene synthase, chloroplastic OS=Oryza s... [more]
KSL6_ORYSJ9.462e-1425.54Ent-isokaur-15-ene synthase OS=Oryza sativa subsp.... [more]
KSL4_ORYSI1.236e-1330.00Syn-pimara-7,15-diene synthase OS=Oryza sativa sub... [more]
KSL5_ORYSJ2.331e-1224.14Ent-pimara-8(14),15-diene synthase OS=Oryza sativa... [more]
KSL10_ORYSJ3.044e-1226.58Ent-sandaracopimara-8(14),15-diene synthase OS=Ory... [more]
KSL5_ORYSI3.975e-1224.57Ent-isokaur-15-ene synthase OS=Oryza sativa subsp.... [more]
KSL7_ORYSJ4.395e-1125.23Ent-cassa-12,15-diene synthase OS=Oryza sativa sub... [more]
KSL7_ORYSI7.497e-1125.57Ent-cassa-12,15-diene synthase OS=Oryza sativa sub... [more]
CPS4_ORYSJ9.792e-1127.85Syn-copalyl diphosphate synthase OS=Oryza sativa s... [more]
CPS4_ORYSI9.792e-1127.85Syn-copalyl diphosphate synthase OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_B06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935484 ID=CK935484; Name=CK935484; organism=Citrus sinensis; type=EST; length=901bp
GGGGAAACATTACTAGCTTTAGCAACCTTTTCTTCTCNNNNCTCAAAAGC
CTTCAGAAAGCAATAGAAACAAAATGTCTTTGGAAGTTTCAGCCTCTCCT
GCTAAAGTTATCCAAAATGCTGGGAAAGATTCTACTCGTCGCTCTGCAAA
TTATCATCCAAGCATCTGGGGGGATCATTTCCTTCAATATACTTGTGACA
CCCAGGAAACTGATGATGGCAGCAATGTAAAGCATCTAGAGCTGAAGAAA
GAAATTAGAAGAATGCTAAAAGCTGATAACAAGCCTTCACGTACACTTCA
ATTGATTGATGCAATTCAGCGTTTAGGAGTGTCTTACCATTTTGAAAGTG
AGGTTGATGAAATATTGGGAAAGATGCATAAGGCTTCCCAAGACTCTGAT
CTTTGTAATAATGAAAATGATGAGCTCTATTATATCTCTCTTCATTTTCG
ATTACTTAGACAAAATGGCTATAAAATTTCCGCTGATGTGTTCAAAAAGT
TCAAAGACACGGATGGGAACTTTAAAACATCTCTTGCGAAAGATGTTCGA
GGAATGTTAAGCTTGTATGAAGCTACGCATCTCGGGGTACATGAAGAAGA
TATACTAGATGAAGCGCTTGCTTTCACCACTAGTCACCTAGAGTCAATAG
CGACTCATCAAATCAGGTCTCCACTTGTTGAACAAGTCAAACATGCCTTA
GTTCAGCCTATCCACAGGGGCTTACAAAGGCTTGAGGCAAGACAGTACAT
TCCTATCTATCAAGAAGAATCTCCCCACAATGAAGCTCTGTTAACTTTTG
CAAAGTTAGATTTTAACAAATTGCAAAAGCTTCACCAGAAGGAACTCGGT
GATATTTCAAGGTGGTGGAAAGAATTAGACTTTGCACATAAGCTACCTTT
C
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