CK935485

Overview
NameCK935485
Unique NameCK935485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935485 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11
Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 1
Query:   88 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQY 372
            V V+ + FPP +    +T  L L G G+  +EI    +KFTAIGVYL+   +  L  +WKGK    LA   DFF  +V+ P EKF ++  I  + G QY
Sbjct:   10 VQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQY 108          
BLAST of CK935485 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11
Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 1
Query:   88 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQY 372
            V V+ + FPP +    +T  L L G G+  +EI    +KFTAIGVYL+   +  L  +WKGK    LA   DFF  +V+ P EKF ++  I  + G QY
Sbjct:   10 VQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQY 108          
BLAST of CK935485 vs. ExPASy Swiss-Prot
Match: CFI_HORVU (Chalcone--flavonone isomerase OS=Hordeum vulgare GN=CHI PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 58/199 (29.15%), Postives = 85/199 (42.71%), Query Frame = 1
Query:   73 MGTEVVMVDEIPFPPQITTTKPLN---LLGHGLTDIEIHFLQIKFTAIGVYL--DPEILSHLQQWKGKQGSSLAQDDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQL-ESAVRDRLXXXXXXXXXXXXXXXXXXXFFQSKYFKKDSVIAYHFPATSPTAEIVFTSEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 651
            M    + VD + FPP        +   L G G+  +EI    IKFTAIGVYL  D  + +   +W GK  + LA D  FF  +V+   EKF R+ +I  + G+QY  ++ E+ V                       F    +    S++  H PA   T      S   E   + +ENA + E + +  + G  GVSP
Sbjct:    1 MAVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQADAAVSALAAKWAGKPAADLASDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYTDAEAAAVDKFKEAFGPHSFAPGASILFTHSPAGVLTVAFSKDSSVPESGGVAIENARLCEAVLESII-GEHGVSP 198          
The following BLAST results are available for this feature:
BLAST of CK935485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CFI2_VITVI5.397e-1140.40Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_VITVI7.049e-1140.40Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI_HORVU9.206e-1129.15Chalcone--flavonone isomerase OS=Hordeum vulgare G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_B07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935485 ID=CK935485; Name=CK935485; organism=Citrus sinensis; type=EST; length=869bp
GGGGAATCAAATTATCAGTTTCTTTTTCTCCCTACTTCATCATTTTCCAA
TAGTTTCCCACTAAAGATTACCATGGGCACTGAAGTTGTAATGGTGGATG
AAATCCCATTTCCTCCTCAGATCACCACCACCAAGCCGTTGAACCTTCTG
GGTCATGGTTTAACAGACATTGAGATACACTTTCTCCAAATCAAGTTCAC
GGCAATTGGAGTCTACTTGGATCCTGAAATTTTGAGTCACTTGCAACAGT
GGAAGGGCAAACAGGGAAGTTCCCTTGCACAAGATGATGACTTCTTTGAT
GCTCTTGTCTCTGCTCCAGTAGAGAAATTTTTTAGAATTGTTGTGATCAA
GGAGATCAAGGGGTCACAATATGGGGTTCAGTTAGAAAGTGCGGTGAGGG
ACAGATTGGCCGAAGCTGACAAATATGAAGAAGAGGAAGAATCTGCCCTT
GAGAAAATCGTTGAATTCTTCCAATCCAAGTATTTTAAGAAGGACTCTGT
GATTGCTTATCATTTTCCGGCAACATCCCCTACTGCTGAGATAGTGTTTA
CAAGTGAAGGAAAGGAGGACTCAAAAATCAAAGTGGAGAATGCGAATGTG
GTTGAGATGATCAAGAAATGGTACTTGGGTGGAGCAAGGGGAGTGTCTCC
TACAACAACATCATCTCTAGCCAATACTCTCTCAGCTGAGTTATCAAAAT
GAAGCAGCTCTGCGCTTTCTAATAAAAGTGCTTCTTCACTTGGGTTTTGG
AATTGCTGTAAATTTGTGGAATTTGAATGACGTGTTTACCCCGCAACCAT
GCTTCTATTTTAATGAAAATTTGCTTTGCTAAGGTCCTTCAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA
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