CK935494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: GLPF_STRR6 (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glpF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15 Identity = 64/226 (28.32%), Postives = 101/226 (44.69%), Query Frame = 2 Query: 248 LIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSA-------LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN-------NDKAWDDHWIFWVGPFVG 883 L EF+ TL+ + + V G G + I +G + V V+ + +S H+NPAVT G+ L + + Y++AQ GA+ G LV K Y + N +A+ ++ G A L +EI+GTFVLV T+F+ A + +G + + L+ TG +NPAR G ++++ D W WI VGP +G Sbjct: 5 LFGEFLGTLILILLGNGVVAGVVLPKTKSNSSGWIVITMGWGIAVAVAVFVSGKLSPAHLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILAT-FSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGPVIG 223
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: GLPF_SHIFL (Glycerol uptake facilitator protein OS=Shigella flexneri GN=glpF PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15 Identity = 64/219 (29.22%), Postives = 97/219 (44.29%), Query Frame = 2 Query: 251 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW 856 IAEF+ T L ++ V V K + A G + + W G + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W Sbjct: 12 IAEFLGTGLLIFFGVGCVAA-LKVAGASFGQWEISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGW 219
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: GLPF_ECOLI (Glycerol uptake facilitator protein OS=Escherichia coli (strain K12) GN=glpF PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15 Identity = 64/219 (29.22%), Postives = 97/219 (44.29%), Query Frame = 2 Query: 251 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW 856 IAEF+ T L ++ V V K + A G + + W G + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W Sbjct: 12 IAEFLGTGLLIFFGVGCVAA-LKVAGASFGQWEISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGW 219
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: GLPF_ECOL6 (Glycerol uptake facilitator protein OS=Escherichia coli O6 GN=glpF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15 Identity = 64/219 (29.22%), Postives = 97/219 (44.29%), Query Frame = 2 Query: 251 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW 856 IAEF+ T L ++ V V K + A G + + W G + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W Sbjct: 12 IAEFLGTGLLIFFGVGCVAA-LKVAGASFGQWEISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGW 219
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: GLPF_ECO57 (Glycerol uptake facilitator protein OS=Escherichia coli O157:H7 GN=glpF PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15 Identity = 64/219 (29.22%), Postives = 97/219 (44.29%), Query Frame = 2 Query: 251 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH----------------EYNSLGGGANTVASGY-NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW 856 IAEF+ T L ++ V V K + A G + + W G + + +Y TAG+SG H+NPAVT L+L + + ++V+Q GA C LV + E L G +T + + N A E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR FG V AW W Sbjct: 12 IAEFLGTGLLIFFGVGCVAA-LKVAGASFGQWEISVIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRG---PLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGW 219
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: GLPF_THEMA (Probable glycerol uptake facilitator protein OS=Thermotoga maritima GN=glpF PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.892e-15 Identity = 67/224 (29.91%), Postives = 97/224 (43.30%), Query Frame = 2 Query: 251 IAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV-KAFMKHEYNSLGGGAN-----TVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY-------NNDKAWDDHWIFWVGPFVG 883 +AEF+ T+L + + V + G + I +G + + VY ISG HINPAVT GL + + Y+ +Q LGA G LV ++ H + A T + G+ L EIIGT VL+ V K + L PL +GF V+ + L+ TG INPAR FG + + D W W+ +GP +G Sbjct: 5 LAEFLGTMLLIILGDGVVANVVLKKSKGHNSGWIVITTGWGLAVAMSVYLVGRISGAHINPAVTIGLAFIGQFPWSKVPGYIFSQILGAFVGAILVYLTYLPHWKETDDPDAKLAVFCTGPAVRKYGANLLTEIIGTMVLLMGVLGIGANKLA------DGLNPLLVGFLVWSIGLSLGGPTGYAINPARDFGPRLAHAILPIPGKRDSDWSYSWVPIIGPIIG 222
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: NIP32_ORYSJ (Aquaporin NIP3-2 OS=Oryza sativa subsp. japonica GN=NIP3-2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.161e-14 Identity = 72/246 (29.27%), Postives = 110/246 (44.72%), Query Frame = 2 Query: 161 HHHGKDYVD----PPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883 HHH VD PP PL+ + + AEF T ++ ++T+I ++ G LLGIA + G + VLV ISG H+NPAV+ + + + + Y+ AQ LG+I VK Y+ + G TV A E + TFVL++ + + ATDP + V L + +G + M L P TG +NPAR+ G A+ + W++ V +G Sbjct: 75 HHHLWHPVDLPKIKPPVPLV-----------KKVGAEFFGTFTLIFTVLSTIIMDEQHK---GVESLLGIATSAGLAVTVLVLSLIHISGCHLNPAVSIAMTVFGHLPPAHLLPYIAAQILGSITASFAVKGM----YHPVNPGIVTVPK-VGTVEAFFLEFVTTFVLLFIITALATDP------NAVKELIAVAVGATIMMNALVAGPSTGASMNPARTLGPAIATGR---YTQIWVYLVATPLG 292
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.517e-14 Identity = 61/210 (29.05%), Postives = 97/210 (46.19%), Query Frame = 2 Query: 233 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV-----KAFMKHE--YNSLGGGANTVA----------SGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 811 S + +AEF+ T L ++ V K + A G+ + I W G + + +Y +AG+SG H+NPAV+ L+L + Y+ AQ GA C LV F++ E N + G +++A + G A E++ T +L+ + + TD LAPL IG + ++ A P+TG +NPAR FG Sbjct: 9 SLFGQCLAEFLGTALLIFFGTGCVAA-LKVAGASFGLWEISIIWGVG--VSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVIMALTDDGNGLPRG---PLAPLLIGLLIAVIGSAMGPLTGFAMNPARDFG 212
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14 Identity = 74/238 (31.09%), Postives = 99/238 (41.60%), Query Frame = 2 Query: 242 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN--TVASG----------YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPV---LAPLPIGFAVFMVHLATIPITGTGINPARSFG----AAVIYNNDKA-----WDDHWIFWVGPFVG 883 R AEF+ TL+ + V + + G L AW FG M+ V Y GISGGHINPAVT + + RK + Y+VAQ +GA G + + GG + T A+G +A E IG +LV + + D DS+ P + L IGF V + +A T INPAR G A++I A W W W GP G Sbjct: 348 REPFAEFLGTLVLVIFGVGGNLQATVTKGSGGSYESLSFAWGFGCMLGV--YVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEGGPHIRTTATGACLFTDPKSYVTWRNAFFDEFIGASILVGCLMALLD------DSNAPPGNGMTALIIGFLVAAIGMALGYQTSFTINPARDLGPRIFASMIGYGPHAFHLTHWWWTWGAWGGPIAG 577
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: GLPF_STRPN (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae GN=glpF PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14 Identity = 63/226 (27.88%), Postives = 101/226 (44.69%), Query Frame = 2 Query: 248 LIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSA-------LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN-------NDKAWDDHWIFWVGPFVG 883 L EF+ TL+ + + V G G + I +G + V V+ + +S ++NPAVT G+ L + + Y++AQ GA+ G LV K Y + N +A+ ++ G A L +EI+GTFVLV T+F+ A + +G + + L+ TG +NPAR G ++++ D W WI VGP +G Sbjct: 5 LFGEFLGTLILILLGNGVVAGVVLPKTKSNSSGWIVITMGWGIAVAVAVFVSGKLSPAYLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILAT-FSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGPVIG 223 The following BLAST results are available for this feature:
BLAST of CK935494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935494 ID=CK935494; Name=CK935494; organism=Citrus sinensis; type=EST; length=930bpback to top |