CK935494

Overview
NameCK935494
Unique NameCK935494
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 1.210e-104
Identity = 179/237 (75.53%), Postives = 199/237 (83.97%), Query Frame = 2
Query:  173 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            KDY +PPPAPL +  EL  WSFYRA IAEF+AT LFLY+++ TV+G K+    C  VG+ G+AWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YMV QCLGAICG G+VK FM   Y  LGGGAN V  GY KG  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN++ AW+DHWIFWVGP +G
Sbjct:   30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIG 266          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 2.063e-104
Identity = 178/237 (75.11%), Postives = 199/237 (83.97%), Query Frame = 2
Query:  173 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            KDY +PPPAPL +  ELK WSFYRA IAEFVAT LFLY++V TV+G  K +  C  VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAICG G+VK F +  Y   GGGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D AW DHWIFWVGPF+G
Sbjct:   35 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIG 271          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 4.596e-104
Identity = 176/237 (74.26%), Postives = 200/237 (84.39%), Query Frame = 2
Query:  173 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            KDY +PPPAPL +  ELK WSFYRA IAEFVAT LFLY+++ TV+G  K +  C  VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+CG G+VK F +  Y   GGGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D AW+DHWIFWVGPF+G
Sbjct:   32 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIG 268          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 6.003e-104
Identity = 179/237 (75.53%), Postives = 197/237 (83.12%), Query Frame = 2
Query:  173 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            KDY +PPPAPL +  EL  WSFYRA IAEFVAT LFLY+S+ TV+G  K S  C  VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAICG G+VK F +  Y   GGGAN V  GY KG  LGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA++YN   AW+DHWIFWVGPF+G
Sbjct:   31 KDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIG 267          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 372.474 bits (955), Expect = 1.931e-102
Identity = 176/238 (73.95%), Postives = 200/238 (84.03%), Query Frame = 2
Query:  179 YVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQS---DACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            Y DPPPAPL+D +EL  WS YRALIAEF+ATL+FLYVS+ATVIG+K Q    DAC GVG LG+AW+FG  IFVLVYCT G+SGGHINPAVT GLF  RK+SL+R V Y+VAQCLGAI G G+VK  MK  Y++LGGGANTV+ GY+   ALGAEI+GTF+LVYTVFSATDPKR+ARDS +PVL PLPIGFAVF+VHLATIPITGTGINPARS GAAV+YN   AW DHWIFWVGP +G
Sbjct:   23 YWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIG 260          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 1.635e-101
Identity = 176/238 (73.95%), Postives = 195/238 (81.93%), Query Frame = 2
Query:  170 GKDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            G+DY +PP APL + +EL  WSFYRA IAEFVAT LFLYV+V TV+G  K    CG VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RAV Y+V QCLGA+CG G+VKAF    Y S GGGAN V+ GY KG  LGAE++GTFVLVYTVFSATD KR+ARDSHVP LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IY+N   W  HWIFWVGPF G
Sbjct:   36 GRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAG 273          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 369.392 bits (947), Expect = 1.635e-101
Identity = 175/237 (73.84%), Postives = 195/237 (82.28%), Query Frame = 2
Query:  173 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            KDY +PP AP+ ++ EL  WSFYRA IAEFVAT LFLY+S+ TV+G  K +  C  VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM  QCLGAICG G+VK F +  Y   GGGAN V  GY KG  LGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA++YN   AW DHWIFWVGPF+G
Sbjct:   31 KDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIG 267          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 366.696 bits (940), Expect = 1.060e-100
Identity = 175/238 (73.53%), Postives = 198/238 (83.19%), Query Frame = 2
Query:  173 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFM-KHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            KDY +PPPAPL + +EL  WSFYRA IAEF+AT LFLY++V TV+G  ++S  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV Q LGAICG G+VK F  K  +  L GGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+++N    W+DHWIFWVGPF+G
Sbjct:   32 KDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIG 269          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 5.442e-97
Identity = 172/237 (72.57%), Postives = 191/237 (80.59%), Query Frame = 2
Query:  173 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            KDY +PPPAPL +  ELK WSFYR  IAEFVAT LFLY+S+ TV+G  K +  C  VG+ GIAW+FGGMI  LVYCTAGISG HINPAVTFGLFLARK+SL RAV Y++ QCLGAICG G+VK F +  Y   GG  N VA GY KG  LGAEI+GTF+LVYTVFSATD KR ARDSHVP+LAPLPIGFAVF+VHLAT+ ITGTGINPARS GAAVIYN   AW DHWIFWVGPF+G
Sbjct:   31 KDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIG 266          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.934e-90
Identity = 165/240 (68.75%), Postives = 190/240 (79.17%), Query Frame = 2
Query:  173 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI--YNNDKAWDDHWIFWVGPFVG 883
            KDY DPPPAPL+D  EL  WS YRA IAEF ATLL + +SV+TVIG K+QS   GG G+LGIAWAFGG+IFVLVYCTAGISGGH+NPAVTF + LAR+VSL RA  Y +AQC+GA+CG GL +A     +Y   GGGAN +A+GY+ G+ + AE++GTFVLVYTVFSATDPKR ARDSHVPVLAPLPIG AV +VHLATIPITGTGINPARS G A++      KAW   WIFWVGPF G
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQSGE-GGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAG 250          
The following BLAST results are available for this feature:
BLAST of CK935494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
PIP1_SOLLC1.210e-10475.53Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP13_MAIZE2.063e-10475.11Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_MAIZE4.596e-10474.26Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP15_MAIZE6.003e-10475.53Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP27_ORYSJ1.931e-10273.95Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP16_MAIZE1.635e-10173.95Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP13_ORYSJ1.635e-10173.84Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP2_PEA1.060e-10073.53Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP11_MAIZE5.442e-9772.57Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP28_ORYSJ4.934e-9068.75Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_A10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935494 ID=CK935494; Name=CK935494; organism=Citrus sinensis; type=EST; length=930bp
GGGGACAGACGCTAGCTTTTCTCGAGACCAGAGAGGCTGTGTGCTTTTCT
TTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGACA
AACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCAC
CACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCTC
ATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCAC
TGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTTT
TGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGC
ACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCT
GTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGG
CTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATG
AAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGG
CTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGC
TTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGAC
TCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCAT
GGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTA
GGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGAC
CATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAGCGGC
ATACCACCAGTACATNCTGAGGGCTGCTGC
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