CK935494

Overview
NameCK935494
Unique NameCK935494
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 1.719e-42
Identity = 101/228 (44.30%), Postives = 140/228 (61.40%), Query Frame = 2
Query:  215 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHK---KQSDACGGV-GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            +E K   F+RA++AEF+A +LF+++S+ + +G     K +   G V   + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+ Y++AQC+GAI    ++         NSL  G N +A G N G  LG EIIGT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  TG GINPARSFG++VI +N   + DHWIFWVGPF+G
Sbjct:    3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIG 221          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 2.246e-42
Identity = 101/228 (44.30%), Postives = 140/228 (61.40%), Query Frame = 2
Query:  215 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHK---KQSDACGGV-GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            +E K   F+RA++AEF+A +LF+++S+ + +G     K +   G V   + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+ Y++AQC+GAI    ++         NSL  G N +A G N G  LG EIIGT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  TG GINPARSFG++VI +N   + DHWIFWVGPF+G
Sbjct:    3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIG 222          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 6.534e-42
Identity = 100/228 (43.86%), Postives = 141/228 (61.84%), Query Frame = 2
Query:  215 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHK---KQSDACGGV-GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            +E K   F+RA++AEF+A  LF+++S+ + +G +   + +   G     + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAV Y++AQC+GAI    ++         NSL  G N++A G + G  LG EIIGT  LV  V + TD +R  RD  +   APL IGF+V + HL  I  TG GINPARSFG+AVI +N   + DHW+FWVGPF+G
Sbjct:    3 SEFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSL--GLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHN---FQDHWVFWVGPFIG 221          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 1.456e-41
Identity = 100/228 (43.86%), Postives = 137/228 (60.09%), Query Frame = 2
Query:  215 AELKLWSFYRALIAEFVATLLFLYVSVATVIGH----KKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            +E K   F+RA++AEF+A +LF+++S+ + +G     +    A      + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAV Y++AQC+GAI    ++         NSL  G N +A G N G  LG EIIGT  LV  V + TD +R  RD  +    PL IG +V + HL  I  TG GINPARSFG++VI +N K   DHWIFWVGPF+G
Sbjct:    3 SEFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSL--GRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFK---DHWIFWVGPFIG 221          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 169.859 bits (429), Expect = 1.901e-41
Identity = 100/226 (44.25%), Postives = 138/226 (61.06%), Query Frame = 2
Query:  215 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQ--SDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            +E K   F+RA++AEF+AT LF+++S+ + +G K    ++       + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y++AQC+GAI    ++         NSL  G N +A G N G  LG EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARSFG+AVI +N   + +HWIFWVGPF+G
Sbjct:    3 SEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIG 219          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 9.435e-41
Identity = 99/226 (43.81%), Postives = 137/226 (60.62%), Query Frame = 2
Query:  215 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQ--SDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            +E K   F+RA++AEF+A  LF+++S+ + +G K    ++       + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y++AQC+GAI    ++         NSL  G N +A G N G  LG EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARSFG+AVI +N   + +HWIFWVGPF+G
Sbjct:    3 SEFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIG 219          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 2.102e-40
Identity = 100/229 (43.67%), Postives = 138/229 (60.26%), Query Frame = 2
Query:  215 AELKLWSFYRALIAEFVATLLFLYVSVATVIG-----HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY-NSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            +E+K   F+RA++AEF+A  LF+++S+ + +G      + Q+     V    ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAV Y++AQC+GAI    ++         NSL  G N +A G N G  LG EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARSFG+AV+  N   + +HWIFWVGPF+G
Sbjct:    3 SEIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVK---VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSL--GRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRN---FSNHWIFWVGPFIG 219          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 165.622 bits (418), Expect = 3.585e-40
Identity = 100/229 (43.67%), Postives = 138/229 (60.26%), Query Frame = 2
Query:  215 AELKLWSFYRALIAEFVATLLFLYVSVATVIG-----HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY-NSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            +E+K   F+RA++AEF+A  LF+++S+ + +G      + Q+     V    ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAV Y++AQC+GAI    ++         NSL  G N +A G N G  LG EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARSFG+AV+  N   + +HWIFWVGPF+G
Sbjct:    3 SEIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVK---VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSL--GRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRN---FSNHWIFWVGPFIG 219          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.506e-38
Identity = 93/218 (42.66%), Postives = 131/218 (60.09%), Query Frame = 2
Query:  233 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            +F++A+ AEF+A L+F+ +SV + I      +    V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++  ++    N +GG G  TV      G  L  E+I TF LV+T+F++ D KR    + V     L IGF+V + HL  I  TG  +NPARSFG AVI  N   W++HWI+WVGP +G
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIG 243          
BLAST of CK935494 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.383e-38
Identity = 91/230 (39.57%), Postives = 135/230 (58.70%), Query Frame = 2
Query:  215 AELKLWSFYRALIAEFVATLLFLYVSVATVIG-----HKKQSDACG-GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVG 883
            +E K  +F+RA+IAEF+A +LF+++S+   +G      +K +   G    ++ ++ AFG  I  +      +SG H+NPAVT G  L+ ++S+++AV Y++AQCLGA+    ++       E NSL  G N ++ G + G  LG EI+ TF LV  V + TD +R      V    PL IG +V + HL  I  TG G+NPARSFG+AV+  N   +  HWIFWVGP +G
Sbjct:    3 SEFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSL--GLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSV----PLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVLTKN---FTYHWIFWVGPMIG 223          
The following BLAST results are available for this feature:
BLAST of CK935494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
AQP1_BOVIN1.719e-4244.30Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP2.246e-4244.30Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_PIG6.534e-4243.86Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA1.456e-4143.86Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN1.901e-4144.25Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB9.435e-4143.81Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE2.102e-4043.67Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_RAT3.585e-4043.67Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP4_NOTAL1.506e-3842.66Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQPA_RANES4.383e-3839.57Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_A10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935494 ID=CK935494; Name=CK935494; organism=Citrus sinensis; type=EST; length=930bp
GGGGACAGACGCTAGCTTTTCTCGAGACCAGAGAGGCTGTGTGCTTTTCT
TTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGACA
AACTCACCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCAC
CACTCATTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCTC
ATAGCCGAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCAC
TGTCATTGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTTT
TGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGC
ACCGCTGGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCT
GTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGG
CTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATG
AAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGG
CTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGC
TTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGAC
TCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCAT
GGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTA
GGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGAC
CATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAGCGGC
ATACCACCAGTACATNCTGAGGGCTGCTGC
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