CK935514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935514 vs. ExPASy Swiss-Prot
Match: RL10_PYRCJ (50S ribosomal protein L10e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.077e-32 Identity = 77/171 (45.03%), Postives = 100/171 (58.48%), Query Frame = 3 Query: 57 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVGRK 566 M RPARCYR+IK PY + + G P +I +D+G F LV+ E+ + +ALEAAR +KY+ K+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ V K + H +EALRRA K P +I+V K Sbjct: 1 MPARPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFTMVAKLVAEERGQIRMQALEAARQISSKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYVEFKPEHLAHVKEALRRAASKLPIPTRIVVEPK 171
BLAST of CK935514 vs. ExPASy Swiss-Prot
Match: RL10_HYPBU (50S ribosomal protein L10e OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl10e PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.242e-32 Identity = 77/173 (44.51%), Postives = 107/173 (61.85%), Query Frame = 3 Query: 57 MGRRPARCYRQIKNK-----PYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRR--AKFKFPGRQKII 554 M ++PARCY + ++K PY + + GVP PKI+ + +G ++ + V + E+ + ALEAAR+A +KY++ G + RVRV+P HVLR NKM++ AGADRLQ GMR AFGKP GT ARV GQ +L VR K + HA+EALRR +K P R ++I Sbjct: 1 MPQKPARCYTKRRSKAFSGPPYTRKEYIHGVPPPKIQKFVMGNPH---GDYDYIVEVYVTERGQIRHNALEAARVAVHKYLSTTIGDQNYFFRVRVYPHHVLRENKMMAFAGADRLQEGMRQAFGKPVGTAARVYPGQAVLEVRVKKEHLDHAKEALRRGASKLPLPSRIRVI 170
BLAST of CK935514 vs. ExPASy Swiss-Prot
Match: RL10_THENV (50S ribosomal protein L10e OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl10e PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.512e-31 Identity = 73/168 (43.45%), Postives = 97/168 (57.74%), Query Frame = 3 Query: 66 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVGRK 566 RPARCY++IK PY + + G P +I +D+G FP LV E+ + +ALEAAR KY++K+ G ++LR+ P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ K + H +EALRRA K P +I++ K Sbjct: 4 RPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFPLVAKLVVQERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLEAVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEAGQVIFYAEFKPEHVAHMKEALRRASTKLPLPTRIVIEAK 171
BLAST of CK935514 vs. ExPASy Swiss-Prot
Match: RL10_PYRAR (50S ribosomal protein L10e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl10e PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.512e-31 Identity = 73/168 (43.45%), Postives = 97/168 (57.74%), Query Frame = 3 Query: 66 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVGRK 566 RPARCYR+IK PY + + G P +I +D+G FP L+ E+ + +ALEAAR +KY+ K+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQ+L K + H +EA RRA K P +I++ K Sbjct: 4 RPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARATFPMVAKLIVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVIPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQILFYAEFKPEHLAHIKEAFRRAASKLPLPTRIVIEPK 171
BLAST of CK935514 vs. ExPASy Swiss-Prot
Match: RL10_METJA (50S ribosomal protein L10e OS=Methanocaldococcus jannaschii GN=rpl10e PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.022e-30 Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 3 Query: 66 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIV 557 RP RCYR + PY + + +GVP PK+ + +G EFP V+LV+ + ALEAAR+A NKY+ K G+ + ++RV+P +LR +KM + AGADR+ GMR AFGKP GT ARV GQ +L+V A+EALRRA K P +I++ Sbjct: 5 RPNRCYRDVDKPPYTRKEYVKGVPQPKVVHFIMGNLSA---EFPVKVNLVATRPIQIRHNALEAARVAANKYLTKMCGRMGYKFQIRVYPHQILREHKMATGAGADRISDGMRLAFGKPIGTAARVKEGQAILTVWVNPDKFPAAKEALRRAAMKLPVPCRIVI 165
BLAST of CK935514 vs. ExPASy Swiss-Prot
Match: RL10_ARCFU (50S ribosomal protein L10e OS=Archaeoglobus fulgidus GN=rpl10e PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.335e-30 Identity = 71/167 (42.51%), Postives = 105/167 (62.87%), Query Frame = 3 Query: 57 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIV 557 M R+PAR +R+++ +PY ++ + G P ++R++D+G K +FP + LV+ E + ALEAAR+ NKY+++ AG + L++R+ P H+LR +KM AGADR+ GMR AFGKP G ARV G ++SV K + A+EALRRA K P KI+V Sbjct: 1 MARKPARMWRRLE-RPYTRTEYIDGAPGTRVRMFDMGNKSA---DFPVMLTLVAKEAVQIRENALEAARVVANKYVSRRAGASNYKLKLRIFPHHILREHKMAVGAGADRISQGMRAAFGKPVGRAARVKPGTKIMSVWVKPEHFEIAKEALRRAAMKMPTPTKIVV 163
BLAST of CK935514 vs. ExPASy Swiss-Prot
Match: RL10_PYRIL (50S ribosomal protein L10e OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl10e PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.743e-30 Identity = 73/168 (43.45%), Postives = 98/168 (58.33%), Query Frame = 3 Query: 66 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDE-FPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVGRK 566 RPARCYR+IK PY + + G P +I +D+G+ F LV E+ + +ALEAAR KY++K+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ + + H +EALRRA K P +I++ K Sbjct: 4 RPARCYRRIKGPPYTREEYIHGAPMIQIPKFDMGVTSAAARAAFSMVAKLVVEERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYAEFRPEHIAHIKEALRRAASKLPLPTRIVIETK 171
BLAST of CK935514 vs. ExPASy Swiss-Prot
Match: RL10_PYRAE (50S ribosomal protein L10e OS=Pyrobaculum aerophilum GN=rpl10e PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.743e-30 Identity = 74/168 (44.05%), Postives = 97/168 (57.74%), Query Frame = 3 Query: 66 RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGV-DEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVGRK 566 RPARCY++IK PY + + G P +I +D+G F LV E+ + +ALEAAR +KY+ K+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQVL K + H +EALRRA K P +I++ K Sbjct: 4 RPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARTAFTMTAKLVVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVLFYAEFKPEHLPHIKEALRRAASKLPLPTRIVIEPK 171
BLAST of CK935514 vs. ExPASy Swiss-Prot
Match: RL10_METMP (50S ribosomal protein L10e OS=Methanococcus maripaludis GN=rpl10e PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.131e-28 Identity = 70/167 (41.92%), Postives = 95/167 (56.89%), Query Frame = 3 Query: 57 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIV 557 M RPARCYR I+ + Y + + R VP PK+ Y +G EFP V LVS + ALE++RIA NKY+ G+ + +RV+P +LR NKM + AGADR+ GMR +FGK GT A+V GQ ++++ A+EALRR K P KI+V Sbjct: 1 MALRPARCYRTIERRSYTRKEYVRAVPQPKVVHYVMGNPSA---EFPVQVQLVSKSDILIRHNALESSRIAGNKYILSECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAKEALRRCSMKLPTACKIVV 164
BLAST of CK935514 vs. ExPASy Swiss-Prot
Match: RL10_THEPD (50S ribosomal protein L10e OS=Thermofilum pendens (strain Hrk 5) GN=rpl10e PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.747e-28 Identity = 73/167 (43.71%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 57 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIV 557 M RP RCYR PY + + + P I +D+G K F + LV + + ALEAAR NKY+ G+ F LRV V P H+LR NKM++ AGADRLQ GMR +FG P G ARV GQ+++ V+ N HA+EALRRA K P +IIV Sbjct: 1 MPLRPGRCYRHFGTPPYTRLEYIKSNPPVLIPKFDLGNPK---GNFNTVLKLVVMRPGQIRANALEAARQHANKYLTAKVGEANFFLRVAVFPHHILRENKMMAMAGADRLQDGMRLSFGTPVGRAARVEAGQIVMLVKVDAKNIDHAKEALRRAASKIPLPSRIIV 164 The following BLAST results are available for this feature:
BLAST of CK935514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935514 ID=CK935514; Name=CK935514; organism=Citrus sinensis; type=EST; length=858bpback to top |