CK935527 | Citrus Genome Database

Overview


Name	CK935527
Unique Name	CK935527
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	838

Libraries


Library Name	Type
Developing fruit 24 DAFB	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CK935527 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 2.843e-48
Identity = 71/116 (61.21%), Postives = 85/116 (73.28%), Query Frame = 3

Query:  291 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNLASGG 635
            SF  DFL GG++AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D+   +W++FAGNLASGG
Sbjct:    7 SFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGG 121

HSP 2 Score: 77.0258 bits (188), Expect = 2.843e-48
Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = 2

Query:  635 AAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVY 838
            AAGA+SL FVY LD+ARTRLA D    K   ER+F GL D   K  KSDGI GLY+GF++S  GII+Y
Sbjct:  122 AAGATSLCFVYPLDFARTRLAADV--GKSATEREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIY 187

[Close]

BLAST of CK935527 vs. ExPASy Swiss-Prot
Match: ADT1_RABIT (ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=SLC25A4 PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 3.705e-48
Identity = 75/116 (64.66%), Postives = 85/116 (73.28%), Query Frame = 3

Query:  291 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNLASGG 635
            SFL DFL GGV+AAVSKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGNLASGG
Sbjct:    7 SFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGG 121

HSP 2 Score: 74.3294 bits (181), Expect = 3.705e-48
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 2

Query:  635 AAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVY 838
            AAGA+SL FVY LD+ARTRLA D    K   +R+F+GL +   K  KSDG+ GLY+GF++S  GII+Y
Sbjct:  122 AAGATSLCFVYPLDFARTRLAADV--GKGAAQREFSGLGNCLTKIFKSDGLRGLYQGFNVSVQGIIIY 187

[Close]

BLAST of CK935527 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 6.294e-48
Identity = 74/116 (63.79%), Postives = 85/116 (73.28%), Query Frame = 3

Query:  291 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNLASGG 635
            SFL DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGNLASGG
Sbjct:    7 SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGG 121

HSP 2 Score: 73.9442 bits (180), Expect = 6.294e-48
Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 2

Query:  635 AAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVY 838
            AAGA+SL FVY LD+ARTRLA D    K   +R+F GL +   K  KSDG+ GLY+GF++S  GII+Y
Sbjct:  122 AAGATSLCFVYPLDFARTRLAADV--GKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIY 187

[Close]

BLAST of CK935527 vs. ExPASy Swiss-Prot
Match: ADT_CHLKE (ADP,ATP carrier protein OS=Chlorella kessleri PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.781e-45
Identity = 74/145 (51.03%), Postives = 94/145 (64.83%), Query Frame = 3

Query:  222 TGLALVSPVSPI--FVQAPSEKSLS--SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGL 638
            +GL   S + P   F+ +P E      +F+ D L GG + A+SKTA APIERVKLL+Q QD   MIKSG++   Y GI +CF R   ++G+ S WRGN ANV+RYFPTQA NFAFKD  K LF     +  +W++F  NLASGGL
Sbjct:   13 SGLLRASAMGPQTPFIASPKETQADPMAFVKDLLAGGTAGAISKTAVAPIERVKLLLQTQDSNPMIKSGQVPR-YTGIVNCFVRVSSEQGVASFWRGNLANVVRYFPTQAFNFAFKDTIKGLFPKYSPKTDFWRFFVVNLASGGL 156

HSP 2 Score: 67.781 bits (164), Expect = 2.781e-45
Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 2

Query:  638 AGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVY 838
            AGA SLL VY LD+ARTRLA D  + K    R+F GL+D   K +K  G   LY+GF +S  GIIVY
Sbjct:  157 AGAGSLLIVYPLDFARTRLAADVGSGKS---REFTGLVDCLSKVVKRGGPMALYQGFGVSVQGIIVY 220

[Close]

BLAST of CK935527 vs. ExPASy Swiss-Prot
Match: ADT_DICDI (Mitochondrial substrate carrier family protein ancA OS=Dictyostelium discoideum GN=ancA PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.933e-44
Identity = 66/120 (55.00%), Postives = 82/120 (68.33%), Query Frame = 3

Query:  276 EKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGG 635
            +  +SSF+ D L+GG +  VSKT  APIERVKLL+Q Q    +       YKGI DCF R  K++G++SLWRGN ANVIRYFPTQALNFAFKD +K+ F     ++   K+F GNL SGG
Sbjct:    6 KNDVSSFVKDSLIGGTAGGVSKTIVAPIERVKLLLQVQSASTQIAA-DKQYKGIVDCFVRVSKEQGVISLWRGNLANVIRYFPTQALNFAFKDKYKKFFVRHTAKENPTKFFIGNLLSGG 124

HSP 2 Score: 71.633 bits (174), Expect = 3.933e-44
Identity = 39/68 (57.35%), Postives = 44/68 (64.71%), Query Frame = 2

Query:  635 AAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVY 838
            AAGA+SLLFVY LD+ARTRLA D      G  RQF GL +      K DG+ GLYRGF +S  GI VY
Sbjct:  125 AAGATSLLFVYPLDFARTRLAADVGT---GSARQFTGLGNCISSIYKRDGLIGLYRGFGVSVGGIFVY 189

[Close]

BLAST of CK935527 vs. ExPASy Swiss-Prot
Match: ADT2_ANOGA (ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=AGAP002358 PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 6.683e-44
Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = 3

Query:  291 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNLASGGL 638
            +F+ DF  GG+SAA+SKTA APIERVKLL+Q Q  + K    +  YKG+ DCF R  +++G  + WRGN ANVIRYFPTQALNFAFKD +K++F    D++  + ++F GNLASGG+
Sbjct:    9 AFIKDFAAGGISAAISKTAVAPIERVKLLLQVQ-HISKQIAEADRYKGMVDCFVRIPREQGFSAFWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFTRYFIGNLASGGM 124

HSP 2 Score: 73.559 bits (179), Expect = 6.683e-44
Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = 2

Query:  638 AGASSLLFVYSLDYARTRLANDAKAAKKGGE-RQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVY 838
            AGA+SL FVY LD+ARTRLA D     KG E R+F GL D   K  K+DG+ GLYRGF +S  GII+Y
Sbjct:  125 AGATSLCFVYPLDFARTRLAADVG---KGAEAREFKGLGDCISKIFKTDGLVGLYRGFGVSVQGIIIY 189

[Close]

BLAST of CK935527 vs. ExPASy Swiss-Prot
Match: ADT4_MOUSE (ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.184e-29
Identity = 69/116 (59.48%), Postives = 81/116 (69.83%), Query Frame = 3

Query:  291 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNLASGG 635
            SF  D L GGV+AAVSKTA APIERVKLL+Q Q    K       YKG+ DC  R  +++G LS WRGN ANVIRYFPTQALNFAFKD +K LF    +++  +W+WF  NLASGG
Sbjct:   20 SFSKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASS-KQISPEARYKGMLDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKELFMSGVNKEKQFWRWFLANLASGG 134

HSP 2 Score: 70.8626 bits (172), Expect = 1.035e-11
Identity = 43/83 (51.81%), Postives = 49/83 (59.04%), Query Frame = 2

Query:  590 RWLLEVVCWELGIWWAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVY 838
            RW L      L    AAGA+SL  VY LD+ARTRL  D    K   +RQF GL D   K  KSDG+ GLY+GF +S  GIIVY
Sbjct:  124 RWFLA----NLASGGAAGATSLCVVYPLDFARTRLGVDI--GKGPEQRQFTGLGDCIMKIAKSDGLIGLYQGFGVSVQGIIVY 200

[Close]

BLAST of CK935527 vs. ExPASy Swiss-Prot
Match: ADT4_MACFA (ADP/ATP translocase 4 OS=Macaca fascicularis GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.184e-29
Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 3

Query:  288 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNLASGG 635
            SSF  D L GGV+AAVSKTA APIERVKLL+Q Q    K       YKG+ DC  R  +++G  S WRGN ANVIRYFPTQALNFAFKD +K+LF    +++  +W+WF  NLASGG
Sbjct:   18 SSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASS-KQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGG 133

HSP 2 Score: 74.7146 bits (182), Expect = 7.170e-13
Identity = 46/83 (55.42%), Postives = 50/83 (60.24%), Query Frame = 2

Query:  590 RWLLEVVCWELGIWWAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVY 838
            RW L      L    AAGA+SL  VY LD+ARTRL  D    K   ERQF GL D   K  KSDGIAGLY+GF +S  GIIVY
Sbjct:  123 RWFLA----NLASGGAAGATSLCVVYPLDFARTRLGVDI--GKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGIIVY 199

[Close]

BLAST of CK935527 vs. ExPASy Swiss-Prot
Match: ADT4_HUMAN (ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.184e-29
Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 3

Query:  288 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNLASGG 635
            SSF  D L GGV+AAVSKTA APIERVKLL+Q Q    K       YKG+ DC  R  +++G  S WRGN ANVIRYFPTQALNFAFKD +K+LF    +++  +W+WF  NLASGG
Sbjct:   18 SSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASS-KQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGG 133

HSP 2 Score: 74.7146 bits (182), Expect = 7.170e-13
Identity = 46/83 (55.42%), Postives = 50/83 (60.24%), Query Frame = 2

Query:  590 RWLLEVVCWELGIWWAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVY 838
            RW L      L    AAGA+SL  VY LD+ARTRL  D    K   ERQF GL D   K  KSDGIAGLY+GF +S  GIIVY
Sbjct:  123 RWFLA----NLASGGAAGATSLCVVYPLDFARTRLGVDI--GKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGIIVY 199

[Close]

BLAST of CK935527 vs. ExPASy Swiss-Prot
Match: ADT4_BOVIN (ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.184e-29
Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 3

Query:  288 SSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD-GYWKWFAGNLASGG 635
            +SF  D L GGV+AAVSKT  APIERVKLL+Q Q    K       YKGI DC  R  +++G LS WRGN ANVIRYFPTQALNFAFKD +K+LF    +++  +W+WF  NLASGG
Sbjct:   22 TSFGKDLLAGGVAAAVSKTTVAPIERVKLLLQVQASS-KQISPEAQYKGIVDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGG 137

HSP 2 Score: 73.559 bits (179), Expect = 1.597e-12
Identity = 45/83 (54.22%), Postives = 49/83 (59.04%), Query Frame = 2

Query:  590 RWLLEVVCWELGIWWAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVY 838
            RW L      L    AAGA+SL  VY LD+ARTRL  D    K   ERQF GL D   K  KSDGI GLY+GF +S  GIIVY
Sbjct:  127 RWFLA----NLASGGAAGATSLCVVYPLDFARTRLGADI--GKGPEERQFKGLGDCIMKIAKSDGIVGLYQGFGVSVQGIIVY 203

The following BLAST results are available for this feature:

BLAST of CK935527 vs. ExPASy Swiss-Prot

BLAST of CK935527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71


Match Name	E-value	Identity	Description
ADT3_PIG	2.843e-48	61.21	ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=...	[more]
ADT1_RABIT	3.705e-48	64.66	ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=...	[more]
ADT1_BOVIN	6.294e-48	63.79	ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=...	[more]
ADT_CHLKE	2.781e-45	51.03	ADP,ATP carrier protein OS=Chlorella kessleri PE=3...	[more]
ADT_DICDI	3.933e-44	55.00	Mitochondrial substrate carrier family protein anc...	[more]
ADT2_ANOGA	6.683e-44	55.56	ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=...	[more]
ADT4_MOUSE	3.184e-29	59.48	ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 ...	[more]
ADT4_MACFA	3.184e-29	58.97	ADP/ATP translocase 4 OS=Macaca fascicularis GN=SL...	[more]
ADT4_HUMAN	3.184e-29	58.97	ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 ...	[more]
ADT4_BOVIN	3.184e-29	58.97	ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE...	[more]

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Properties


Property Name	Value
Genbank description	CGF1004554_F09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F09 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK935527 ID=CK935527; Name=CK935527; organism=Citrus sinensis; type=EST; length=838bp
GGGGACATTACGGAGGTCTCACACTAGGCGACCTTCTCAGGTCACCATCT
TCAGCTGCAAACATGGCAGATGGATCGTATCCATCCGTATTTCAGAAAAT
GCAAGGCCAGTCATACTTCATTTCTGGGGTCTCCCCCAATTTGTATGCCC
ACAACTACAGTGTGGCAGGTTCCTTTGTTAATAGAGGATCACAGAATTCT
TTTTGGGCAGCAAGTCAGGGAACTGGCCTGGCACTTGTGTCTCCTGTTTC
TCCTATATTCGTACAAGCTCCATCGGAAAAAAGTCTTTCTTCTTTTTTGG
TGGATTTTCTCATGGGAGGAGTTTCAGCAGCTGTTTCCAAGACTGCAGCT
GCTCCTATTGAGCGGGTTAAGCTTTTGATTCAGAATCAAGATGAGATGAT
CAAGAGTGGTCGGCTCTCGCATCCGTACAAGGGGATTTCTGATTGCTTTG
GTAGAACTGTTAAGGATGAAGGCATACTATCTCTTTGGAGAGGCAACACT
GCCAATGTTATCAGATACTTCCCTACCCAGGCCCTGAACTTTGCATTCAA
GGATTACTTTAAGAGGCTGTTTAACTTCAAGAAAGACAGAGATGGCTACT
GGAAGTGGTTTGCTGGGAACTTGGCATCTGGTGGGCTGCTGGTGCTTCAT
CGCTTCTTTTTGTGTATTCGCTTGACTATGCAAGAACACGTTTGGCAAAT
GATGCTAAGGCAGCTAAAAAGGGTGGGGAAAGGCAGTTTAATGGTTTGAT
TGATGTCTACAAGAAGACTCTGAAATCTGATGGCATTGCTGGGCTCTACC
GTGGATTCAGCATCTCATGTGTTGGAATTATAGTGTAT