CK935566

Overview
NameCK935566
Unique NameCK935566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935566 vs. ExPASy Swiss-Prot
Match: MPPB_SCHPO (Probable mitochondrial-processing peptidase subunit beta OS=Schizosaccharomyces pombe GN=qcr1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20
Identity = 61/200 (30.50%), Postives = 102/200 (51.00%), Query Frame = 1
Query:  325 KTKISTLPNGVKIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSV 915
            KT+ +TL NG+ +A+E    +  A++ + V  GS  E+  + G  H LE +AF+ T+NRS   +  E E  G ++ A  SREQ  Y   A K  VP  V +L D + N       V  +   +  E  EV      ++ + +H+  Y G  L   +L P+  I  L    L +++ +NY   RM+++++G + H++LV +
Sbjct:   21 KTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKNRSQKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISASAVERERQVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTREDLLQYIKDNYRSDRMIISSAGSISHEELVKL 220          
BLAST of CK935566 vs. ExPASy Swiss-Prot
Match: MPPB_BLAEM (Mitochondrial-processing peptidase subunit beta OS=Blastocladiella emersonii GN=MPP1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20
Identity = 56/197 (28.43%), Postives = 107/197 (54.31%), Query Frame = 1
Query:  325 KTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQL 906
            KT+++ LPNG+ +A+E++ +   A++ +++  GS  E+  + G  H LE ++F+ T+ R+   +  E+E +GG++ A  SREQ  Y        V + V +L D ++N       ++ +   +  E  EV    + ++ + +H+A +   AL   +L P+  I  L+   L+ ++  NYT  RMV+  +G V+H +L
Sbjct:   34 KTQVTRLPNGLTVATESNPALATATVGVWIDSGSRAETKANNGVAHFLEHISFKGTKQRTQSGLEIEIENMGGHLNAYTSREQTVYYAKLFSQDVAKGVNILGDILQNSTLDPGAIDRERAVILREAEEVDKQVEEVVFDHLHAAAFPENALGYTILGPKENIQTLSQADLQAYIKNNYTADRMVVVGAGNVDHAEL 230          
BLAST of CK935566 vs. ExPASy Swiss-Prot
Match: MPPA_RAT (Mitochondrial-processing peptidase subunit alpha OS=Rattus norvegicus GN=Pmpca PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.321e-20
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 1
Query:  307 DYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVS--NNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLV 909
            D  E  +TK++TL NG+++AS+       ++ + +  GS YE+    G  H LE++AF ST R  S   I+  +E  GG      SR+   Y+  A    +  +V LL D V +P   D E+      V+ E+ +++   +P+ LL E IH A +    +      P   I +++  +L  ++   YT  RMVLA  GVEH+ LV
Sbjct:   59 DGQEKFETKVTTLDNGLRVASQNKFGQFCTLGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIGKIDREVLHSYLKNYYTPDRMVLAGVGVEHEHLV 263          
BLAST of CK935566 vs. ExPASy Swiss-Prot
Match: Y5738_STRCO (Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor GN=SCO5738 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.109e-17
Identity = 56/199 (28.14%), Postives = 104/199 (52.26%), Query Frame = 1
Query:  322 GKTKISTLPNGVKIASETSVSP-VASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAI-HSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLV 909
            G  + +TLP G++I +ET  S   A+  ++   GS  E+P   G TH LE + F+ TR RS L I   ++A+GG + A  ++E   Y    L T +P  ++++ D +   +  + +V+ +   +  EI+   ++P   + +   H+     AL  P+L     +N L +  +  F  ++Y    +V+AA+G V+H+++V
Sbjct:   33 GTVRRTTLPGGLRIVTETLPSVRSATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRKRSALDISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCDMLTGSLIQEEDVDVERGAILEEIAMTEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRFYRKHYDPTHLVVAAAGNVDHNKVV 231          
BLAST of CK935566 vs. ExPASy Swiss-Prot
Match: Y338_RICFE (Uncharacterized zinc protease RF_0338 OS=Rickettsia felis GN=RF_0338 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.216e-17
Identity = 57/197 (28.93%), Postives = 97/197 (49.24%), Query Frame = 1
Query:  334 ISTLPNGVKIASETS--VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVS 912
            IS L NG+ + +     V  VA I+L    GS YE+    G +H LE MAF+ T  R+  +I  E + IGG+  A    E+  Y    L     + + +L D ++N +F + E+ ++   +  EI+   +NP  L+ E  +S+ Y    L  P+L     ++         F+ ++Y    + L+ +G V+HD++VS
Sbjct:    7 ISKLKNGLTVLTYNMPYVDSVA-INLITKVGSRYENSEEEGISHFLEHMAFKGTTTRTAKQIAEEFDEIGGHFNAYTGHEKTIYYARVLSENCDKALNILADIIQNSIFAEEEIAKEYQVILQEIAHSQDNPDDLIYEKFYSSVYKDQPLGKPILGASKTLSSFTKEHFLSFIDKHYNAGNLYLSVAGNVDHDKIVS 202          
BLAST of CK935566 vs. ExPASy Swiss-Prot
Match: Y522_RICBR (Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain RML369-C) GN=RBE_0522 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17
Identity = 56/196 (28.57%), Postives = 97/196 (49.49%), Query Frame = 1
Query:  334 ISTLPNGVKIASETS--VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLV 909
            +S L NG+ I +     V+ VA I+L    GS YE+P   G  H LE MAF+ T+ R+  +I  E ++IGG+  A    E+  Y    L     + + ++ D V+N  F + E+ ++   +  EI+   +NP  L+ E  +++ +    L  P+L     I   N     +F  ++Y      L+ +G V+H+++V
Sbjct:    7 VSKLKNGLTILTYNMPYVNSVA-INLIAKVGSRYENPGEEGIAHFLEHMAFKGTKTRTAKQIAEEFDSIGGHFNAYTGHEKTVYYSRVLSENCNKALAIIADIVQNSAFAEEEIAKEYQVILQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPILGTSKTIETFNRDHFLKFTGKHYNAENFYLSIAGNVDHEEIV 201          
BLAST of CK935566 vs. ExPASy Swiss-Prot
Match: UCR1_CAEEL (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis elegans GN=ucr-1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17
Identity = 50/189 (26.46%), Postives = 100/189 (52.91%), Query Frame = 1
Query:  325 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG 888
            + +++TL NG ++ +E + S  A++ +++  GS +E+  + G  H LER+  + T  R+   +  E+ AIG  + +   R+Q      A    V ++V++L D +RN       ++ +   +  E+    +  Q +L + +H+AG+ G  LA  +L    +I  +++  L+E+  ++Y   RMVL+A G
Sbjct:   37 QAEVTTLKNGFRVVTEDNGSATATVGVWIETGSRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTAVFVQAGAQDVEKVVDILADVLRNSKLEASTIDTERVNLLKELEASDDYHQLVLFDMLHAAGFQGTPLALSVLGTSESIPNISAQQLKEWQEDHYRPVRMVLSAVG 225          
BLAST of CK935566 vs. ExPASy Swiss-Prot
Match: Y2805_MYCBO (Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis GN=Mb2805c PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.392e-17
Identity = 58/196 (29.59%), Postives = 102/196 (52.04%), Query Frame = 1
Query:  337 STLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSV 915
            +TLP G+++ +E       AS+ ++VG GS  E     G  H LE + F+ST  RS + I + ++A+GG + A  ++E   Y    L + +P  V+L+ D V N      +V  +   V  EI+   ++P+  L +   +A +    +  P++    +++ +    L+ F    YT  RMV+AA+G V+HD LV++
Sbjct:   18 TTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAAAGNVDHDGLVAL 213          
BLAST of CK935566 vs. ExPASy Swiss-Prot
Match: Y2782_MYCTU (Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium tuberculosis GN=Rv2782c PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.392e-17
Identity = 58/196 (29.59%), Postives = 102/196 (52.04%), Query Frame = 1
Query:  337 STLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSV 915
            +TLP G+++ +E       AS+ ++VG GS  E     G  H LE + F+ST  RS + I + ++A+GG + A  ++E   Y    L + +P  V+L+ D V N      +V  +   V  EI+   ++P+  L +   +A +    +  P++    +++ +    L+ F    YT  RMV+AA+G V+HD LV++
Sbjct:   18 TTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAAAGNVDHDGLVAL 213          
BLAST of CK935566 vs. ExPASy Swiss-Prot
Match: Y855_MYCLE (Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae GN=ML0855 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.951e-16
Identity = 55/196 (28.06%), Postives = 101/196 (51.53%), Query Frame = 1
Query:  337 STLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASG-VEHDQLVSV 915
            +TLP G+++ +E       AS+ ++VG GS  E     G  H LE + F+ST  R+ + I + ++A+GG + A  ++E   Y    L + +   V+L+ D V N      +V  +   V  EI+   ++P+  L +   +A +    +  P++    +++ +  T L  F    YT  RMV+A +G V+HD++V++
Sbjct:   25 TTLPGGLRVVTEHLPAVRSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTSTRTAMDIAQAIDAVGGELNAFTAKEHTCYYAHVLDSDLELAVDLVADVVLNGRCAVDDVELERDVVLEEIAMRDDDPEDALGDMFLAALFGDHPVGRPVIGTMESVSAMTRTQLHSFHVRRYTPERMVVAVAGNVDHDEMVAL 220          
The following BLAST results are available for this feature:
BLAST of CK935566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
MPPB_SCHPO3.119e-2030.50Probable mitochondrial-processing peptidase subuni... [more]
MPPB_BLAEM3.119e-2028.43Mitochondrial-processing peptidase subunit beta OS... [more]
MPPA_RAT5.321e-2031.71Mitochondrial-processing peptidase subunit alpha O... [more]
Y5738_STRCO1.109e-1728.14Uncharacterized zinc protease SCO5738 OS=Streptomy... [more]
Y338_RICFE4.216e-1728.93Uncharacterized zinc protease RF_0338 OS=Rickettsi... [more]
Y522_RICBR7.191e-1728.57Uncharacterized zinc protease RBE_0522 OS=Ricketts... [more]
UCR1_CAEEL7.191e-1726.46Cytochrome b-c1 complex subunit 1, mitochondrial O... [more]
Y2805_MYCBO9.392e-1729.59Uncharacterized zinc protease Mb2805c OS=Mycobacte... [more]
Y2782_MYCTU9.392e-1729.59Uncharacterized zinc protease Rv2782c/MT2852 OS=My... [more]
Y855_MYCLE7.951e-1628.06Uncharacterized zinc protease ML0855 OS=Mycobacter... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_B11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935566 ID=CK935566; Name=CK935566; organism=Citrus sinensis; type=EST; length=916bp
GGGGGAGCCTCTTTCTCTCGATTAGCTGCCAGTCTTCAACACTTGTCCCG
TTCAAATTAGGGTTTTGGAGAATTGACTATCAAATCAATCAGCATGTACA
GAAACGCAGCCTCTCGTCTTCGAGCCCTCAAGGGCCATGTGCGTTGTAGG
GTGCCTTCAGCCACAAGATTTGCAAGTTCCAGTGCCGTTGCTTCAACTTC
ATCCTCTTCGGGTGGTCTCTTTAGCTGGTTGACTGGGGAACGGTCCAGTT
CTTCACCTTCTCTGGACTTTCCACTTCCGGGTGTCTCTCTTCCACCTTCA
TTGCCTGATTATGTTGAACCTGGTAAAACCAAGATTTCTACTCTACCAAA
TGGTGTCAAAATTGCCTCGGAAACATCAGTGAGTCCTGTAGCCTCAATAT
CGTTATATGTTGGTTGTGGTTCAATTTATGAGTCACCAATCTCATTTGGG
ACAACACACTTGCTTGAGCGTATGGCTTTTAGAAGTACAAGAAATAGGAG
TCACTTGCGTATTGTGCGAGAAGTGGAGGCAATTGGTGGCAATGTCCAAG
CCTCAGCTTCTAGGGAGCAGATGGGTTACTCCTTTGATGCTTTGAAAACT
TATGTTCCTGAAATGGTAGAGCTTCTTATTGACTGTGTGAGAAACCCTGT
TTTTCTGGATTGGGAGGTCAACGAACAGCTCACAAAGGTGAAATCTGAGA
TTAGTGAGGTTTCCAACAATCCTCAAAGCTTGCTTTTGGAGGCAATTCAC
TCAGCTGGTTACTCTGGTGCATTGGCTAATCCTCTTCTAGCCCCGGAATC
TGCTATAAATAGATTAAACTCTACACTTCTCGAAGAATTTGTTGCTGAAA
ATTATACTGGTCCTCGGATGGTACTTGCTGCTTCTGGTGTTGAACATGAC
CAGTTGGTGTCTGTAG
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