CK935605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935605 vs. ExPASy Swiss-Prot
Match: AMYB_THETU (Thermophilic beta-amylase OS=Thermoanaerobacter thermosulfurogenes PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.584e-19 Identity = 58/159 (36.48%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 334 VFVMMPLDSVTMSNTVNRKKAMDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVSIPLPKWVVEEVDKDQDLVYTDQWGMRNYEYISLGCDTIPVLKGRMPVQCYSDFMRAFKDKF---KDLL 801 VFVM PL+ VT N A L LK+ GV G+ D+WWG VE ++W Y + + GLK +MS H CGGNVGD+V+IP+P WV + D ++ Y D+ G + E +S P G Q Y++F +F F KD++ Sbjct: 40 VFVMGPLEKVTDFN------AFKDQLITLKNNGVYGITTDIWWGYVENAGENQFDWSYYKTYADTVRAAGLKWVPIMSTHACGGNVGDTVNIPIPSWVWTK-DTQDNMQYKDEAGNWDNEAVS------PWYSGL--TQLYNEFYSSFASNFSSYKDII 183
BLAST of CK935605 vs. ExPASy Swiss-Prot
Match: AMYB_BACCI (Beta-amylase OS=Bacillus circulans PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.802e-16 Identity = 52/156 (33.33%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 334 VFVMMPLDSVTMSNTVNRKKAMDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVSIPLPKWVVEEVDKDQDLVYTDQWGMRNYEYISLGCDTIPVLKGRMPVQCYSDFMRAFKDKFKDLL 801 V VM PL VT N+ + L LK+ GV + DVWWG VE ++W Y + K+ GLK ++S H+CGGNVGD +IPLP W+ + D ++ + D+ G N E +S + G+ + Y+ F + F +KD++ Sbjct: 44 VSVMGPLAKVTDWNSFKNQ------LTTLKNNGVYAITTDVWWGYVESAGDNQFDWSYYKTYADTVKQAGLKWVPIISTHRCGGNVGDDCNIPLPSWLWSKGSAD-EMQFKDESGYVNNESLSPFWSGV----GKQYDELYASFAQNF-SAYKDMI 187
BLAST of CK935605 vs. ExPASy Swiss-Prot
Match: AMYB_BACFI (Beta-amylase (Fragment) OS=Bacillus firmus PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.520e-15 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 379 VNRKKAMDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVSIPLPKWVVEEVDKDQDLVYTDQWGMRNYEYIS 702 +N + L+ LK+ GV + DVWWG VE ++W Y + K GLK ++S H+CGGNVGD +IPLP W+ + D ++ + D+ G N E +S Sbjct: 52 INDWGSFKKQLQTLKNNGVYAITTDVWWGYVESAGDNQFDWSYYKTYADAVKEAGLKWVPIISTHKCGGNVGDDCNIPLPSWLSSKGSAD-EMQFKDESGYANNEALS 158
BLAST of CK935605 vs. ExPASy Swiss-Prot
Match: AMYB_PAEPO (Beta/alpha-amylase OS=Paenibacillus polymyxa PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.283e-14 Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 379 VNRKKAMDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVSIPLPKWVVEEVDKDQDLVYTDQWGMRNYEYIS 702 +N + L+ LK+ GV + DVWWG VE ++W Y K GLK ++S H+CGGNVGD +IPLP W+ + D ++ + D+ G N E +S Sbjct: 52 INDWGSFKKQLQTLKNNGVYAITTDVWWGYVESAGDNQFDWSYYKTYANAVKEAGLKWVPIISTHKCGGNVGDDCNIPLPSWLSSKGSAD-EMQFKDESGYANSEALS 158
BLAST of CK935605 vs. ExPASy Swiss-Prot
Match: AMYB_BACCE (Beta-amylase OS=Bacillus cereus GN=spoII PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12 Identity = 45/156 (28.85%), Postives = 76/156 (48.72%), Query Frame = 1 Query: 337 FVMMPLDSVTMSNTVNRKKAMDASLRALKSAGVEGVMMDVWWGLVERDQPGHYNWGGYSDLLEMAKRHGLKVQAVMSFHQCGGNVGDSVSIPLPKWVVEEVDKDQDLVYTDQWGMRNYEYIS-LGCDTIPVLKGRMPVQCYSDFMRAFKDKFKDLL 801 ++M PL + V + + LR K G + +D WWG +E++ +++ + K G+K+ ++S HQCGGNVGD ++P+P WV + D L + + G N E ++ L D I G + Y+ F A K +KD++ Sbjct: 44 YLMAPLKKIP---EVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSWVWNQ-KSDDSLYFKSETGTVNKETLNPLASDVIRKEYGEL----YTAFAAAMK-PYKDVI 190 The following BLAST results are available for this feature:
BLAST of CK935605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935605 ID=CK935605; Name=CK935605; organism=Citrus sinensis; type=EST; length=829bpback to top |