CK935733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935733 vs. ExPASy Swiss-Prot
Match: H2A1_ORYSI (Probable histone H2A.1 OS=Oryza sativa subsp. indica GN=OsI_26380 PE=3 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.126e-33 Identity = 73/120 (60.83%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 103 GRGRSKDTKPVSRSHKAGLQFLVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTTANGGVLPNIHQNLLPKKAAARK 462 G G +K K SRS KAGLQF VGR+ARFLK G+YA+RVG+G+P GNAARDNKK RI+PRHIQLAV+NDEE +KLLG T A+GGV+PNIHQ+LLPKKA + K Sbjct: 9 GAGAAK--KATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126
BLAST of CK935733 vs. ExPASy Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 78/129 (60.47%), Postives = 86/129 (66.67%), Query Frame = 1 Query: 73 MSSEAAATKGG---RGRSKDTKPVSRSHKAGLQFLVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTTANGGVLPNIHQNLLPKKA 450 M + A KG +G KPVSRS KAGLQF VGR+ RFLKKGRYAQRVGSG+P GNAARDNKKNRIIPRH+ LAV+NDEE KLL VT A+GGVLPNI+ LLPKKA Sbjct: 1 MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKA 129
BLAST of CK935733 vs. ExPASy Swiss-Prot
Match: H2A3_ORYSJ (Probable histone H2A.3 OS=Oryza sativa subsp. japonica GN=Os08g0427700 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 72/116 (62.07%), Postives = 83/116 (71.55%), Query Frame = 1 Query: 109 GRSKDTKPVSRSHKAGLQFLVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTTANGGVLPNIHQNLLPKKAAA 456 G S K SRS KAGLQF VGR+ARFLK G+YA+RVG+G+P GNAARDNKK RI+PRHIQLAV+NDEE S+LLG+VT ANGGV+PNIH LLPKKA + Sbjct: 9 GSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGS 124
BLAST of CK935733 vs. ExPASy Swiss-Prot
Match: H2A3_ORYSI (Probable histone H2A.3 OS=Oryza sativa subsp. indica GN=OsI_028288 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 72/116 (62.07%), Postives = 83/116 (71.55%), Query Frame = 1 Query: 109 GRSKDTKPVSRSHKAGLQFLVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTTANGGVLPNIHQNLLPKKAAA 456 G S K SRS KAGLQF VGR+ARFLK G+YA+RVG+G+P GNAARDNKK RI+PRHIQLAV+NDEE S+LLG+VT ANGGV+PNIH LLPKKA + Sbjct: 9 GSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGS 124
BLAST of CK935733 vs. ExPASy Swiss-Prot
Match: H2A1_PICST (Histone H2A.1 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.332e-33 Identity = 77/132 (58.33%), Postives = 89/132 (67.42%), Query Frame = 1 Query: 100 GGRGR--SKDTKPVSRSHKAGLQFLVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTTANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 489 GG+G+ S + SRS KAGL F VGRV R L+KG YAQRVGSG+P GNAARDNKK+RIIPRH+QLA++NDEE +KLLG VT A GGVLPNIHQNLLPKK+ G+ SQE Sbjct: 3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKS----GKSAKASQE 130
BLAST of CK935733 vs. ExPASy Swiss-Prot
Match: H2A_KLULA (Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 9.095e-33 Identity = 72/122 (59.02%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 97 KGGRGRSKDTKPVSRSHKAGLQFLVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTTANGGVLPNIHQNLLPKKAAARK 462 KGG+ S SRS KAGL F VGRV R L+KG YAQR+GSG+P GNAARDNKK RIIPRH+QLA++ND+E +KLLG+VT A GGVLPNIHQNLLPKK++ K Sbjct: 4 KGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSKAK 125
BLAST of CK935733 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.095e-33 Identity = 72/120 (60.00%), Postives = 85/120 (70.83%), Query Frame = 1 Query: 103 GRGRSKDTKPVSRSHKAGLQFLVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTTANGGVLPNIHQNLLPKKAAARK 462 G G +K K SRS K GLQF VGR+ARFLK G+YA+RVG+G+P GNAARDNKK RI+PRHIQLAV+NDEE +KLLG T A+GGV+PNIHQ+LLPKKA + K Sbjct: 9 GAGAAK--KATSRSSKGGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126
BLAST of CK935733 vs. ExPASy Swiss-Prot
Match: H2A7_WHEAT (Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 9.095e-33 Identity = 73/120 (60.83%), Postives = 85/120 (70.83%), Query Frame = 1 Query: 103 GRGRSKDTKPVSRSHKAGLQFLVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTTANGGVLPNIHQNLLPKKAAARK 462 G G +K K +SRS KAGLQF VGR+ARFLK G+YA+RVG+G+P GNAARDNKK RI+PRHIQLAV+NDEE S+LLG VT A+GGV+PNIH LLPKKA K Sbjct: 9 GSGAAK--KAISRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGMVTIASGGVMPNIHNLLLPKKAGGSK 126
BLAST of CK935733 vs. ExPASy Swiss-Prot
Match: H2A2_DEBHA (Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=3 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 76/132 (57.58%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 100 GGRGR--SKDTKPVSRSHKAGLQFLVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTTANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 489 GG+G+ S + SRS KAGL F VGRV R L+KG YAQRVGSG+P GNAARDNKK+RIIPRH+QLA++NDEE +KLLG VT A GGVLPNIHQ+LLP A+K + G+ SQE Sbjct: 3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLP----AKKAKAGNASQE 130
BLAST of CK935733 vs. ExPASy Swiss-Prot
Match: H2A2_CANAL (Histone H2A.2 OS=Candida albicans GN=HTA2 PE=3 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 1.188e-32 Identity = 75/132 (56.82%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 100 GGRGR--SKDTKPVSRSHKAGLQFLVGRVARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTTANGGVLPNIHQNLLPKKAAARKGEIGSVSQE 489 GG+G+ S + SRS KAGL F VGRV R L+KG YAQR+GSG+P GNAARDNKK+RIIPRH+QLA++NDEE +KLLG VT A GGVLPNIHQ+LLP A+K + G+ SQE Sbjct: 3 GGKGKAGSSEKASTSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQSLLP----AKKAKAGAASQE 130 The following BLAST results are available for this feature:
BLAST of CK935733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935733 ID=CK935733; Name=CK935733; organism=Citrus sinensis; type=EST; length=654bpback to top |