CK935868

Overview
NameCK935868
Unique NameCK935868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.372e-15
Identity = 57/160 (35.62%), Postives = 79/160 (49.38%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+SL                          K   +  E +L EAFKVFD DG+GFISA EL+ V+  LG    +E   V +MI   D + DG++++ EF  MM +
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSL-----------------------MARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADVDGDGQINYEEFVKMMMA 148          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_DICDI (Calmodulin OS=Dictyostelium discoideum GN=calA PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.372e-15
Identity = 55/158 (34.81%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAFKVFD+DG+G+ISA EL+ V+  LG    NE   V +MI   D + DG+V++ EF  MM
Sbjct:   16 KEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGNIDFPEFLTM-----------------------MARKMQDTDTEEEIREAFKVFDKDGNGYISAAELRHVMTSLGEKLTNE--EVDEMIREADLDGDGQVNYDEFVKMM 148          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_ALEFU (Calmodulin OS=Alexandrium fundyense PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.372e-15
Identity = 57/160 (35.62%), Postives = 79/160 (49.38%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+SL                          K   +  E +L EAFKVFD DG+GFISA EL+ V+  LG    +E   V +MI   D + DG++++ EF  MM +
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSL-----------------------MARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADVDGDGQINYEEFVKMMMA 148          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.372e-15
Identity = 56/160 (35.00%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +ELE  I      GN  +DF +F++              + +    D D          E ++ EAFKVFD+DG+G+ISA EL+ V+  LG  E    + V +MI   D + DG++++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADGNGTIDFPEFLT--------------MMARKMRDTD---------SEEEIKEAFKVFDKDGNGYISAAELRHVMTNLG--EKLTDSEVDEMIREADVDGDGQINYEEFVKMMLS 148          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_TRYCR (Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.792e-15
Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I    + G+  +DF +F++L                          K   S  E ++ EAF+VFD+DG+GFISA EL+ V+  LG    +E   V +MI   D + DG++++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTL-----------------------MARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADVDGDGQINYEEFVKMMMS 148          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.792e-15
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+GFISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTM-----------------------MARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADTDGDGQVNYEEFVGMMTS 148          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_CIOIN (Calmodulin OS=Ciona intestinalis PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.792e-15
Identity = 55/158 (34.81%), Postives = 80/158 (50.63%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+GFISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF NMM
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADVDGDGQVNYEEFVNMM 146          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_TRYBG (Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I    + G+  +DF +F++L                          K   S  E ++ EAF+VFD+DG+GFISA EL+ ++  LG    +E   V +MI   D + DG++++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTL-----------------------MARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDE--EVDEMIREADVDGDGQINYEEFVKMMMS 148          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I    + G+  +DF +F++L                          K   S  E ++ EAF+VFD+DG+GFISA EL+ ++  LG    +E   V +MI   D + DG++++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTL-----------------------MARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDE--EVDEMIREADVDGDGQINYEEFVKMMMS 148          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15
Identity = 54/160 (33.75%), Postives = 80/160 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAFKVFD+DG+GFISA EL+ ++  LG    +E   V +MI   D + DG++++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDE--EVDEMIREADIDGDGQINYEEFVKMMMS 148          
The following BLAST results are available for this feature:
BLAST of CK935868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
CALM_KARMI1.372e-1535.63Calmodulin OS=Karlodinium micrum PE=2 SV=1[more]
CALM_DICDI1.372e-1534.81Calmodulin OS=Dictyostelium discoideum GN=calA PE=... [more]
CALM_ALEFU1.372e-1535.63Calmodulin OS=Alexandrium fundyense PE=2 SV=1[more]
CALM_AGABI1.372e-1535.00Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALM_TRYCR1.792e-1534.38Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2[more]
CALM_SUBDO1.792e-1534.38Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM_CIOIN1.792e-1534.81Calmodulin OS=Ciona intestinalis PE=2 SV=3[more]
CALM_TRYBG2.340e-1533.75Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV... [more]
CALM_TRYBB2.340e-1533.75Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2[more]
CALM_PYTSP3.056e-1533.75Calmodulin OS=Pythium splendens PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004389_G07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935868 ID=CK935868; Name=CK935868; organism=Citrus sinensis; type=EST; length=927bp
GGGGGAAAGGAGAACGAGTGGAACGAAGCCCAACAATTGGAAGAAAAAAG
AAATGGTCACAAGTGACATCCCACATGGACTGCAATTGCCCAAATCCCCC
AATATACAGCCTTAACGCCGCCGAACGCGTATCATCCCACATATTATAGT
CAATGAAACTTGAAATTTTTTCCATATTTGTGTAAACCTGTTAACCCTTC
TTCTTCCCCATACTCCCAAAAAGCTCGTTCATTCTTCTTCTTCTTCTGTC
TCTCGGGGATCATCAACTGCCTGCAACTACGTCCTTCGTTTAAAAACACA
ATGGAAGTAGCTGCAGCAGCAGGCCCCGGGGCAACTCCTACAGAAAAGCG
CCGCTGGAGCAGGAGGCCATCATCTTCCAGCTCCTTCCGATTACGTTGCC
CCAGCCTCAACACACTCCGTCTCCGCCGCGTATTCGACATGTTTGACAAA
AACGGCGACGGGATGATCACCGTCAAGGAGCTTCACCAGGCACTCAACCT
TCTCGGACTCGAAACCGACCTCTCGGAGCTAGAATCCACCATCGCCTCCC
ACGTCAAGCCCGGCAATGACGGCCTTGACTTTGAAGATTTTGTATCCTTG
CATGAATCTTTAGATGAAACTTTTTTTCCATTAAATGATCTGACATCAAC
CACGACAACTGATGCTGACGAGGGGAACAAGAAGGTACTGTCGCAGGAGG
AGGCCGACTTGTCGGAGGCGTTTAAGGTGTTTGATGAGGACGGAGACGGA
TTCATTTCTGCACACGAGTTGCAAGTGGTTTTGGGGAAGCTAGGCTTGAC
CGAAGGCAATGAAATTGCCAGAGTTCTGCAGATGATTGGCTCCGTTGACC
GCAACCATGATGGCCGCGTTGACTTCTTCGAATTCAAGAACATGATGCAG
AGCGTTCTTGTTCGAAGTTCTNGATCT
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