CK935868

Overview
NameCK935868
Unique NameCK935868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15
Identity = 54/160 (33.75%), Postives = 80/160 (50.00%), Query Frame = 1 
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAFKVFD+DG+GFISA EL+ ++  LG    +E   V +MI   D + DG++++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDE--EVDEMIREADIDGDGQINYEEFVKMMMS 148
[Close]
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 1 
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+GFISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMMS 148
[Close]
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15
Identity = 56/160 (35.00%), Postives = 82/160 (51.25%), Query Frame = 1 
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I    + G+  +DF +F++              L S    D D          E ++ EAF+VFD+DG+GFISA EL+ V+  LG    +E   V +MI   D + DG++++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLT--------------LMSRKMHDTD---------TEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADVDGDGQINYEEFVKMMMS 148
[Close]
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_STRIE (Calmodulin OS=Strongylocentrotus intermedius PE=2 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 1 
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+GFISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM S
Sbjct:   21 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMTS 155
[Close]
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 56/160 (35.00%), Postives = 82/160 (51.25%), Query Frame = 1 
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      G+  +DF +F+++                   TD++E           ++ EAF+VFD+DGDGFISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR------------KMKDTDSEE-----------EIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVKMMTS 148
[Close]
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 56/160 (35.00%), Postives = 82/160 (51.25%), Query Frame = 1 
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      G+  +DF +F+++                   TD++E           ++ EAF+VFD+DGDGFISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR------------KMKDTDSEE-----------EIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMTS 148
[Close]
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 1 
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+GFISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVKMMTS 148
[Close]
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_LOCMI (Calmodulin OS=Locusta migratoria PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 1 
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+GFISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMTS 148
[Close]
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_DROME (Calmodulin OS=Drosophila melanogaster GN=Cam PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 1 
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+GFISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMTS 148
[Close]
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_APLCA (Calmodulin OS=Aplysia californica GN=CAM PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 1 
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+GFISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM S
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVTMMTS 148
The following BLAST results are available for this feature:
BLAST of CK935868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
CALM_PHYIN3.056e-1533.75Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]
CALM_LUMRU3.056e-1534.38Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_EUGGR3.056e-1535.00Calmodulin OS=Euglena gracilis PE=1 SV=2[more]
CALM_STRIE3.992e-1534.38Calmodulin OS=Strongylocentrotus intermedius PE=2 ... [more]
CALM_RENRE3.992e-1535.00Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_PATSP3.992e-1535.00Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]
CALM_METSE3.992e-1534.38Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_LOCMI3.992e-1534.38Calmodulin OS=Locusta migratoria PE=1 SV=2[more]
CALM_DROME3.992e-1534.38Calmodulin OS=Drosophila melanogaster GN=Cam PE=1 ... [more]
CALM_APLCA3.992e-1534.38Calmodulin OS=Aplysia californica GN=CAM PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004389_G07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935868 ID=CK935868; Name=CK935868; organism=Citrus sinensis; type=EST; length=927bp
GGGGGAAAGGAGAACGAGTGGAACGAAGCCCAACAATTGGAAGAAAAAAG
AAATGGTCACAAGTGACATCCCACATGGACTGCAATTGCCCAAATCCCCC
AATATACAGCCTTAACGCCGCCGAACGCGTATCATCCCACATATTATAGT
CAATGAAACTTGAAATTTTTTCCATATTTGTGTAAACCTGTTAACCCTTC
TTCTTCCCCATACTCCCAAAAAGCTCGTTCATTCTTCTTCTTCTTCTGTC
TCTCGGGGATCATCAACTGCCTGCAACTACGTCCTTCGTTTAAAAACACA
ATGGAAGTAGCTGCAGCAGCAGGCCCCGGGGCAACTCCTACAGAAAAGCG
CCGCTGGAGCAGGAGGCCATCATCTTCCAGCTCCTTCCGATTACGTTGCC
CCAGCCTCAACACACTCCGTCTCCGCCGCGTATTCGACATGTTTGACAAA
AACGGCGACGGGATGATCACCGTCAAGGAGCTTCACCAGGCACTCAACCT
TCTCGGACTCGAAACCGACCTCTCGGAGCTAGAATCCACCATCGCCTCCC
ACGTCAAGCCCGGCAATGACGGCCTTGACTTTGAAGATTTTGTATCCTTG
CATGAATCTTTAGATGAAACTTTTTTTCCATTAAATGATCTGACATCAAC
CACGACAACTGATGCTGACGAGGGGAACAAGAAGGTACTGTCGCAGGAGG
AGGCCGACTTGTCGGAGGCGTTTAAGGTGTTTGATGAGGACGGAGACGGA
TTCATTTCTGCACACGAGTTGCAAGTGGTTTTGGGGAAGCTAGGCTTGAC
CGAAGGCAATGAAATTGCCAGAGTTCTGCAGATGATTGGCTCCGTTGACC
GCAACCATGATGGCCGCGTTGACTTCTTCGAATTCAAGAACATGATGCAG
AGCGTTCTTGTTCGAAGTTCTNGATCT
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