CK935868

Overview
NameCK935868
Unique NameCK935868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_MYXGL (Calmodulin OS=Myxine glutinosa PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+G+ISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVNADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 146          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_MOUSE (Calmodulin OS=Mus musculus GN=Calm1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+G+ISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 146          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_HUMAN (Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+G+ISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 146          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_GECJA (Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+G+ISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 146          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_DANRE (Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+G+ISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 146          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_CTEID (Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+G+ISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 146          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_CHICK (Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+G+ISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 146          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_BOVIN (Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+G+ISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 146          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALM_ANAPL (Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            +  F +FDK+GDG IT KEL   +  LG     +EL+  I      GN  +DF +F+++                          K   +  E ++ EAF+VFD+DG+G+ISA EL+ V+  LG    +E   V +MI   D + DG+V++ EF  MM
Sbjct:   14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM-----------------------MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE--EVDEMIREADIDGDGQVNYEEFVQMM 146          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 50/160 (31.25%), Postives = 82/160 (51.25%), Query Frame = 1
Query:  424 RRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQS 903
            +  F +FDK+GDG IT +EL   +  LG     +EL   ++   + GN  +DF +F+ +                          K   +  E ++ EAF+VFD+DG+GF+SA EL+ V+ +LG    +E   V +MI + D + DG+V++ EF  ++ S
Sbjct:   14 KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGM-----------------------MARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE--EVDEMIRAADTDGDGQVNYEEFVRVLVS 148          
The following BLAST results are available for this feature:
BLAST of CK935868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
CALM_MYXGL1.981e-1433.54Calmodulin OS=Myxine glutinosa PE=2 SV=3[more]
CALM_MOUSE1.981e-1433.54Calmodulin OS=Mus musculus GN=Calm1 PE=1 SV=2[more]
CALM_HUMAN1.981e-1433.54Calmodulin OS=Homo sapiens GN=CALM1 PE=1 SV=2[more]
CALM_GECJA1.981e-1433.54Calmodulin OS=Gecko japonicus GN=GekBS194P PE=2 SV... [more]
CALM_DANRE1.981e-1433.54Calmodulin OS=Danio rerio GN=calm1a PE=2 SV=3[more]
CALM_CTEID1.981e-1433.54Calmodulin OS=Ctenopharyngodon idella GN=calm PE=2... [more]
CALM_CHICK1.981e-1433.54Calmodulin OS=Gallus gallus GN=CALM PE=1 SV=2[more]
CALM_BOVIN1.981e-1433.54Calmodulin OS=Bos taurus GN=CALM PE=1 SV=2[more]
CALM_ANAPL1.981e-1433.54Calmodulin OS=Anas platyrhynchos GN=CALM PE=2 SV=2[more]
CALL3_HUMAN1.981e-1431.25Calmodulin-like protein 3 OS=Homo sapiens GN=CALML... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004389_G07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935868 ID=CK935868; Name=CK935868; organism=Citrus sinensis; type=EST; length=927bp
GGGGGAAAGGAGAACGAGTGGAACGAAGCCCAACAATTGGAAGAAAAAAG
AAATGGTCACAAGTGACATCCCACATGGACTGCAATTGCCCAAATCCCCC
AATATACAGCCTTAACGCCGCCGAACGCGTATCATCCCACATATTATAGT
CAATGAAACTTGAAATTTTTTCCATATTTGTGTAAACCTGTTAACCCTTC
TTCTTCCCCATACTCCCAAAAAGCTCGTTCATTCTTCTTCTTCTTCTGTC
TCTCGGGGATCATCAACTGCCTGCAACTACGTCCTTCGTTTAAAAACACA
ATGGAAGTAGCTGCAGCAGCAGGCCCCGGGGCAACTCCTACAGAAAAGCG
CCGCTGGAGCAGGAGGCCATCATCTTCCAGCTCCTTCCGATTACGTTGCC
CCAGCCTCAACACACTCCGTCTCCGCCGCGTATTCGACATGTTTGACAAA
AACGGCGACGGGATGATCACCGTCAAGGAGCTTCACCAGGCACTCAACCT
TCTCGGACTCGAAACCGACCTCTCGGAGCTAGAATCCACCATCGCCTCCC
ACGTCAAGCCCGGCAATGACGGCCTTGACTTTGAAGATTTTGTATCCTTG
CATGAATCTTTAGATGAAACTTTTTTTCCATTAAATGATCTGACATCAAC
CACGACAACTGATGCTGACGAGGGGAACAAGAAGGTACTGTCGCAGGAGG
AGGCCGACTTGTCGGAGGCGTTTAAGGTGTTTGATGAGGACGGAGACGGA
TTCATTTCTGCACACGAGTTGCAAGTGGTTTTGGGGAAGCTAGGCTTGAC
CGAAGGCAATGAAATTGCCAGAGTTCTGCAGATGATTGGCTCCGTTGACC
GCAACCATGATGGCCGCGTTGACTTCTTCGAATTCAAGAACATGATGCAG
AGCGTTCTTGTTCGAAGTTCTNGATCT
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