CK935871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_MOUSE (60S ribosomal protein L24 OS=Mus musculus GN=Rpl24 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.107e-18 Identity = 54/158 (34.18%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATL-EVIQKRG-----LKSLKFEMLLVRLHFVKLRRGSRRPKMKRGPRKLR*HPSQRL--KARVACPRVPLRR 524 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L +++ KR K+ + + + K ++ S++ M + P Q++ +V+ PRV +R Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR 157
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_MACFA (60S ribosomal protein L24 OS=Macaca fascicularis GN=RPL24 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.107e-18 Identity = 54/158 (34.18%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATL-EVIQKRG-----LKSLKFEMLLVRLHFVKLRRGSRRPKMKRGPRKLR*HPSQRL--KARVACPRVPLRR 524 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L +++ KR K+ + + + K ++ S++ M + P Q++ +V+ PRV +R Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR 157
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_HUMAN (60S ribosomal protein L24 OS=Homo sapiens GN=RPL24 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.107e-18 Identity = 54/158 (34.18%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATL-EVIQKRG-----LKSLKFEMLLVRLHFVKLRRGSRRPKMKRGPRKLR*HPSQRL--KARVACPRVPLRR 524 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L +++ KR K+ + + + K ++ S++ M + P Q++ +V+ PRV +R Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR 157
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_FELCA (60S ribosomal protein L24 OS=Felis catus GN=RPL24 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.107e-18 Identity = 54/158 (34.18%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATL-EVIQKRG-----LKSLKFEMLLVRLHFVKLRRGSRRPKMKRGPRKLR*HPSQRL--KARVACPRVPLRR 524 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L +++ KR K+ + + + K ++ S++ M + P Q++ +V+ PRV +R Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR 157
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_BOVIN (60S ribosomal protein L24 OS=Bos taurus GN=RPL24 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.107e-18 Identity = 54/158 (34.18%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATL-EVIQKRG-----LKSLKFEMLLVRLHFVKLRRGSRRPKMKRGPRKLR*HPSQRL--KARVACPRVPLRR 524 +K ELC FSG KIYPG G R+ R+D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L +++ KR K+ + + + K ++ S++ M + P Q++ +V+ PRV +R Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGASLADIMAKRNQKPEVRKAQREQAIRAAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR 157
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_YARLI (60S ribosomal protein L24 OS=Yarrowia lipolytica GN=RPL24 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.838e-18 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKR 356 +K EL FSG KIYPG+G F+R DS++F F +SK F R P ++ WT +YR++HKK I E KK+ R + K R IVGA+L+VI+++ Sbjct: 1 MKIELDSFSGNKIYPGRGTLFVRGDSKIFRFYSSKTASLFKQRKNPRRIAWTVLYRRKHKKGITEEVSKKRSRKSVKAV-RGIVGASLDVIKEK 93 HSP 2 Score: 22.7126 bits (47), Expect = 2.838e-18 Identity = 10/24 (41.67%), Postives = 13/24 (54.17%), Query Frame = 2 Query: 350 EERTEKPEVRDAAREAALREIKER 421 E+R +PE R+A R KER Sbjct: 92 EKRNARPETRNATRAKHAEAAKER 115
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_DROME (60S ribosomal protein L24 OS=Drosophila melanogaster GN=RpL24 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.207e-18 Identity = 45/98 (45.92%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATL-EVIQKRGLK 365 +K LC FSG KIYPG G ++ D + F F + KC+R + + P K+TWT +YR++H+K I EA KK+ R T+K + R+IVGA+L E++ KR +K Sbjct: 1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQK-FQRAIVGASLAEILAKRNMK 97
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_DICDI (60S ribosomal protein L24 OS=Dictyostelium discoideum GN=rpl24 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.224e-17 Identity = 45/128 (35.16%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRGLKSLKFEMLLVRLHFVKLRRGSRRPKMKRGPRK 458 +KT LC +S KIYP +G++F+R DS+VF F N+K + F ++ P + W+ +YR+ +K + KKK R TKK R+IVGA+LEVIQ++ + + + +++ + K P+K Sbjct: 1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYKNTTTDVSAKKKARKTKK-VERNIVGASLEVIQQKRAQKPEVKQAAAEQAKREIKEKKKAAAKKAAPKK 127
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_SPOFR (60S ribosomal protein L24 OS=Spodoptera frugiperda GN=RpL24 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.309e-16 Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATL-EVIQKRGLK 365 +K LC +SG KIYPG G ++ D + F F NSKC+ R P K+TWT +YR++ KK E KK+ R T+K Y R+IVGA+L +++ KR +K Sbjct: 1 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQTKKRTRRTQK-YQRAIVGASLSDIMAKRNMK 97
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_PLUXY (60S ribosomal protein L24 OS=Plutella xylostella GN=RpL24 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.143e-16 Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATL-EVIQKRGLK 365 +K LC +SG KIYPG G ++ D + F F NSKC+ R P K+TWT +YR++ KK E KK+ R T+K Y R+IVGA+L +++ KR +K Sbjct: 1 MKIGLCAYSGYKIYPGHGKTMVKVDGKNFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTRRTQK-YQRAIVGASLSDIMAKRNMK 97 The following BLAST results are available for this feature:
BLAST of CK935871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935871 ID=CK935871; Name=CK935871; organism=Citrus sinensis; type=EST; length=825bpback to top |