CK935874
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935874 vs. ExPASy Swiss-Prot
Match: PAAY_ECOLI (Phenylacetic acid degradation protein paaY OS=Escherichia coli (strain K12) GN=paaY PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13 Identity = 43/145 (29.66%), Postives = 76/145 (52.41%), Query Frame = 1 Query: 250 PKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLP-AETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 681 P V +++V P VL G V + G V P + LRGD +I V +N+Q+ CV+H G P +T + IG L C I ++G ++++M+G+++ ++I+ A + + +P L G+PA+ +R L+ +E Sbjct: 11 PVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMH-------GFPEQDTVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQE 148
BLAST of CK935874 vs. ExPASy Swiss-Prot
Match: CAIE_SALPB (Carnitine operon protein caiE OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=caiE PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13 Identity = 43/145 (29.66%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 247 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 681 +P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q C++H ++ +T + IG L C + + ++G +S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQYGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
BLAST of CK935874 vs. ExPASy Swiss-Prot
Match: CAIE_SALCH (Carnitine operon protein caiE OS=Salmonella choleraesuis GN=caiE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 43/145 (29.66%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 247 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 681 +P V DA+V P+ VL G V V G + P + LRGD + + SN+Q+ C++H ++ +T + IG L C + + ++G +S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRQILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
BLAST of CK935874 vs. ExPASy Swiss-Prot
Match: CAIE_ECOUT (Carnitine operon protein caiE OS=Escherichia coli (strain UTI89 / UPEC) GN=caiE PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 44/145 (30.34%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 247 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 681 +P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H ++ +T + IG L C I + ++G +S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
BLAST of CK935874 vs. ExPASy Swiss-Prot
Match: CAIE_ECOSM (Carnitine operon protein caiE OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=caiE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 44/145 (30.34%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 247 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 681 +P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H ++ +T + IG L C I + ++G +S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLLVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
BLAST of CK935874 vs. ExPASy Swiss-Prot
Match: CAIE_ECOLU (Carnitine operon protein caiE OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=caiE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 44/145 (30.34%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 247 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 681 +P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H ++ +T + IG L C I + ++G +S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
BLAST of CK935874 vs. ExPASy Swiss-Prot
Match: CAIE_ECOL6 (Carnitine operon protein caiE OS=Escherichia coli O6 GN=caiE PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 44/145 (30.34%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 247 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 681 +P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H ++ +T + IG L C I + ++G +S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
BLAST of CK935874 vs. ExPASy Swiss-Prot
Match: CAIE_ECOL5 (Carnitine operon protein caiE OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=caiE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 44/145 (30.34%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 247 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 681 +P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H ++ +T + IG L C I + ++G +S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
BLAST of CK935874 vs. ExPASy Swiss-Prot
Match: CAIE_ECOK1 (Carnitine operon protein caiE OS=Escherichia coli O1:K1 / APEC GN=caiE PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 44/145 (30.34%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 247 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 681 +P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H ++ +T + IG L C I + ++G +S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
BLAST of CK935874 vs. ExPASy Swiss-Prot
Match: CAIE_ECO81 (Carnitine operon protein caiE OS=Escherichia coli O81 (strain ED1a) GN=caiE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13 Identity = 44/145 (30.34%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 247 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 681 +P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H ++ +T + IG L C I + ++G +S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148 The following BLAST results are available for this feature:
BLAST of CK935874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935874 ID=CK935874; Name=CK935874; organism=Citrus sinensis; type=EST; length=920bpback to top |