CK935879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935879 vs. ExPASy Swiss-Prot
Match: UCRIC_ANASP (Cytochrome b6-f complex iron-sulfur subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=petC3 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.811e-36 Identity = 80/175 (45.71%), Postives = 102/175 (58.29%), Query Frame = 2 Query: 188 SIPADRVPDMSKRQLMNLLLLGAVSLPTGFMLVPYATFF-APPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPW 709 SIP + P +S+RQL+N + V++ G L P F AP AGG AKD +G I A+ L P R L GL G+PTYL+V++D TL G+ CTHLGC PWN + +F CPCHGS+Y G VVRGPAPL L + V + ++ PWTETD RTG+ PW Sbjct: 4 SIPIES-PSLSRRQLLNFITGATVAVTAGAALYPAGKFLIAPAEKTGAGGAILAKDILGKQIPASQIL-AEPPQTRALVAGLAGEPTYLIVKEDHTLDRIGLVDNCTHLGCTFPWNPLDQQFQCPCHGSRYAPDGSVVRGPAPLPLKIVQVAVIDNSILISPWTETDPRTGKKPW 176
BLAST of CK935879 vs. ExPASy Swiss-Prot
Match: UCRIB_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC2 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.607e-35 Identity = 78/168 (46.43%), Postives = 94/168 (55.95%), Query Frame = 2 Query: 209 PDMSKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPW 709 P MS+RQL+N V+ + P FF PP + A GG AKD IG+ I A+ L G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCHGS+Y+ QG V RGPA L L H V++ + W ETD RTGE PW Sbjct: 10 PSMSRRQLLNFFTGAIVAATASAAIYPATKFFMPPAESTDAEGGVLAKDKIGHPIPASQIL-VQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCHGSRYDAQGSVERGPANRPLKLVHVQVKDDYIWISSWQETDPRTGEKPW 176
BLAST of CK935879 vs. ExPASy Swiss-Prot
Match: UCRIB_ANASP (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=petC2 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.891e-34 Identity = 77/168 (45.83%), Postives = 94/168 (55.95%), Query Frame = 2 Query: 209 PDMSKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPW 709 P MS+RQL+N V+ + P FF PP + A GG A+D IG+ I A+ L G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCHGS+Y+ QG V RGPA L L V++ + PW ETD RTGE PW Sbjct: 10 PSMSRRQLLNFFTGAIVATTASAAIYPATKFFMPPAESTDAEGGILAQDKIGHPIPASQIL-AQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCHGSRYDAQGSVERGPANRPLKLVQVQVKDDYIWISPWQETDPRTGEKPW 176
BLAST of CK935879 vs. ExPASy Swiss-Prot
Match: UCRI_CHLTE (Cytochrome b6-f complex iron-sulfur subunit OS=Chlorobium tepidum GN=petC PE=3 SV=4) HSP 1 Score: 73.559 bits (179), Expect = 1.823e-12 Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 437 DPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVV 661 D +VV +L + ++A+CTHLGC+V W+ A + CPCHG++Y G+++ GP PL L +E+GK+V Sbjct: 105 DDKVIVVNHGGSLTA--VSAICTHLGCLVHWDEAADMIACPCHGAKYTQDGKIISGPQPLPLKQYKVKIEDGKIV 177
BLAST of CK935879 vs. ExPASy Swiss-Prot
Match: UCRI_CHLLT (Cytochrome b6-f complex iron-sulfur subunit OS=Chlorobium limicola f.sp. thiosulfatophilum GN=petC PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 4.062e-12 Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 2 Query: 449 LVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVV 661 +VV K L + ++AVCTHLGC+V W A+N++ CPCHG++Y G ++ GP PL L A +E ++ Sbjct: 109 IVVNKGGALTA--VSAVCTHLGCLVNWVDADNQYFCPCHGAKYKLTGEIISGPQPLPLKQYKARIEGDSII 177 The following BLAST results are available for this feature:
BLAST of CK935879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935879 ID=CK935879; Name=CK935879; organism=Citrus sinensis; type=EST; length=914bpback to top |