CK935881

Overview
NameCK935881
Unique NameCK935881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935881 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 5.925e-37
Identity = 95/222 (42.79%), Postives = 128/222 (57.66%), Query Frame = 1
Query:  232 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGV---VKSNTKCSTVGIQ-GIAWAFGGMIFVLVYCTAGISGGHIDPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWV 885
            E K   F+RA +AEF+A  LF++IS+ + +G    +KSN     V     ++ AFG  I  L      ISG H++PAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R  RD  +    PL IGF+V L HL  I  TG GINPARS G+++I      + DHWIFWV
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWV 216          
BLAST of CK935881 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 7.739e-37
Identity = 95/222 (42.79%), Postives = 128/222 (57.66%), Query Frame = 1
Query:  232 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGV---VKSNTKCSTVGIQ-GIAWAFGGMIFVLVYCTAGISGGHIDPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWV 885
            E K   F+RA +AEF+A  LF++IS+ + +G    +KSN     V     ++ AFG  I  L      ISG H++PAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R  RD  +    PL IGF+V L HL  I  TG GINPARS G+++I      + DHWIFWV
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWV 217          
BLAST of CK935881 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.724e-36
Identity = 96/228 (42.11%), Postives = 130/228 (57.02%), Query Frame = 1
Query:  232 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHIDPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWV 885
            E+K   F+RA +AEF+A  LF++IS+ + +G          +V+ N K S         AFG  I  L      ISG H++PAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +AHG   G GLG EIIGT  LV  V + TD +R  RD  +   APL IG +V L HL  I  TG GINPARS G+A++    R + +HWIFWV
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSL--------AFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSL--GRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWV 214          
BLAST of CK935881 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36
Identity = 94/222 (42.34%), Postives = 128/222 (57.66%), Query Frame = 1
Query:  232 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHIDPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWV 885
            E K   F+RA +AEF+A  LF++IS+ + +G    V  + T  +      ++ AFG  I  L      ISG H++PAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R  RD  +   APL IGF+V L HL  I  TG GINPARS G+A+I      + DHW+FWV
Sbjct:    4 EFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSL--GLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVI---THNFQDHWVFWV 216          
BLAST of CK935881 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36
Identity = 94/220 (42.73%), Postives = 127/220 (57.73%), Query Frame = 1
Query:  232 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHIDPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWV 885
            E K   F+RA +AEF+AT LF++IS+ + +G      N + +      ++ AFG  I  L      ISG H++PAVTLGL L+ ++S+ RAL Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R  RD  +   APL IG +V L HL  I  TG GINPARS G+A+I      + +HWIFWV
Sbjct:    4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWV 214          
BLAST of CK935881 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 150.984 bits (380), Expect = 8.556e-36
Identity = 95/228 (41.67%), Postives = 130/228 (57.02%), Query Frame = 1
Query:  232 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHIDPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWV 885
            E+K   F+RA +AEF+A  LF++IS+ + +G          +V+ N K S         AFG  I  L      ISG H++PAVTLGL L+ ++S+ RA+ Y++ QC+GAI  + ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R  RD  +   APL IG +V L HL  I  TG GINPARS G+A++    R + +HWIFWV
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSL--------AFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSL--GRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWV 214          
BLAST of CK935881 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.906e-35
Identity = 93/220 (42.27%), Postives = 126/220 (57.27%), Query Frame = 1
Query:  232 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHIDPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWV 885
            E K   F+RA +AEF+A  LF++IS+ + +G      N + +      ++ AFG  I  L      ISG H++PAVTLGL L+ ++S+ RAL Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R  RD  +   APL IG +V L HL  I  TG GINPARS G+A+I      + +HWIFWV
Sbjct:    4 EFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWV 214          
BLAST of CK935881 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 4.246e-35
Identity = 92/222 (41.44%), Postives = 126/222 (56.76%), Query Frame = 1
Query:  232 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHIDPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWV 885
            E K   F+RA +AEF+A  LF++IS+ + +G    V  + T  +      ++ AFG  I  L      ISG H++PAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R  RD  +    PL IG +V L HL  I  TG GINPARS G+++I      + DHWIFWV
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSL--GRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVI---THNFKDHWIFWV 216          
BLAST of CK935881 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.974e-33
Identity = 88/227 (38.77%), Postives = 127/227 (55.95%), Query Frame = 1
Query:  232 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-----VKSNTKCSTVG----IQGIAWAFGGMIFVLVYCTAGISGGHIDPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWV 885
            E K  +F+RA IAEF+A  LF++IS+   +G       K+N    TVG    I  ++ AFG  I  +      +SG H++PAVTLG  L+ ++S+ +A+ Y++ QCLGA+    ++ G     +   L  G N ++ G + G GLG EI+ TF LV  V + TD +R      V    PL IG +V L HL  I  TG G+NPARS G+A++    + +  HWIFWV
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKAN---QTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSL--GLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSV----PLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL---TKNFTYHWIFWV 218          
BLAST of CK935881 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.191e-33
Identity = 85/213 (39.91%), Postives = 122/213 (57.28%), Query Frame = 1
Query:  247 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHIDPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWV 885
            +F++A  AEF+A  +F+ +SV + +    S      V +  I+  FG  I  +V C   ISGGHI+PAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR+     V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WV
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSV----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWV 235          
The following BLAST results are available for this feature:
BLAST of CK935881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
AQP1_BOVIN5.925e-3742.79Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP7.739e-3742.79Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE1.724e-3642.11Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_PIG2.252e-3642.34Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN3.841e-3642.73Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_RAT8.556e-3641.67Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PONAB1.906e-3542.27Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA4.246e-3541.44Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQPA_RANES3.974e-3338.77Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_RAT5.191e-3339.91Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004389_E09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935881 ID=CK935881; Name=CK935881; organism=Citrus sinensis; type=EST; length=887bp
GGGGGTCACTCATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGC
AAGTGCTTCTTATTGACTATTTTGTGTTTTTGAGGGAGTAGCAGAAATGG
AAGGCAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGG
CAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGCAAGGACTACGTTGA
ACCCCCACCGGCGCCGCTCTTCGAGCCCGGCGAGCTCAAGTCTTGGTCGT
TTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTAC
ATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAACACCAAGTGCTC
AACCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCG
TGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATCGACCCGGCG
GTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACT
TTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTG
TTAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCC
AACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGAT
TATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCA
AACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCCATT
GGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCAATTACCGGAAC
TGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATCTACAACAAGG
ACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGG
back to top