CK935891

Overview
NameCK935891
Unique NameCK935891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length597
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK935891 vs. ExPASy Swiss-Prot
Match: RL44P_CANMA (60S ribosomal protein L44 P OS=Candida maltosa GN=L41P1A PE=3 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 8.082e-43
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 1 
Query:   70 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGERRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHLIKRCRHFEIGGDKKGKGTSL 381
            MVNVPKT+KTYCK +ECRKH+ HKVTQYK GK SL AQG+RRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRL+C  CK  +Q  +KRC+HFE+GGDKK KG +L
Sbjct:    1 MVNVPKTRKTYCKGRECRKHSQHKVTQYKAGKSSLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQAL 104
[Close]
BLAST of CK935891 vs. ExPASy Swiss-Prot
Match: RL44_PICGU (60S ribosomal protein L44 OS=Pichia guilliermondii GN=RPL44 PE=3 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 1.379e-42
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 1 
Query:   70 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGERRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHLIKRCRHFEIGGDKKGKGTSL 381
            MVNVPKT++TYCK K+CRKHT HKVTQYK GK SL AQG+RRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRL+C  CK  +Q  +KRC+HFE+GGDKK KG +L
Sbjct:    1 MVNVPKTRRTYCKGKDCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 104
[Close]
BLAST of CK935891 vs. ExPASy Swiss-Prot
Match: RL44_YEAST (60S ribosomal protein L42 OS=Saccharomyces cerevisiae GN=RPL42A PE=1 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 3.071e-42
Identity = 79/104 (75.96%), Postives = 90/104 (86.54%), Query Frame = 1 
Query:   70 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGERRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHLIKRCRHFEIGGDKKGKGTSL 381
            MVNVPKT+KTYCK K CRKHT HKVTQYK GK SL AQG+RRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRL+C  CK  +Q  +KRC+HFE+GG+KK KG +L
Sbjct:    1 MVNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQAL 104
[Close]
BLAST of CK935891 vs. ExPASy Swiss-Prot
Match: RL44_SCHPO (60S ribosomal protein L44 OS=Schizosaccharomyces pombe GN=rpl44 PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 3.071e-42
Identity = 74/104 (71.15%), Postives = 91/104 (87.50%), Query Frame = 1 
Query:   70 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGERRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHLIKRCRHFEIGGDKKGKGTSL 381
            MVN+PKT+KTYC  K CRKHT+H+VTQYKKG DS  AQG+RRYDRKQSG+GGQTKPVFHKKAK TKK+VLRL+C  CK+ +Q ++KRC+HFE+GG+KK KG ++
Sbjct:    1 MVNIPKTRKTYCPGKNCRKHTVHRVTQYKKGPDSKLAQGKRRYDRKQSGFGGQTKPVFHKKAKVTKKVVLRLECVSCKYKNQLVLKRCKHFELGGEKKTKGAAI 104
[Close]
BLAST of CK935891 vs. ExPASy Swiss-Prot
Match: RL44_YARLI (60S ribosomal protein L44 OS=Yarrowia lipolytica GN=RPL44 PE=3 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 6.842e-42
Identity = 78/104 (75.00%), Postives = 88/104 (84.62%), Query Frame = 1 
Query:   70 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGERRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHLIKRCRHFEIGGDKKGKGTSL 381
            MVN+PKT+ TYCK KECRKHT HKVTQYK GK SL AQG+RRYDRKQSGYGGQTK +FHKKAKTTKK+VLRL+C  CK   Q  +KRC+HFE+GGDKK KG +L
Sbjct:    1 MVNIPKTRNTYCKGKECRKHTQHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKQIFHKKAKTTKKVVLRLECVKCKVKMQLALKRCKHFELGGDKKQKGQAL 104
[Close]
BLAST of CK935891 vs. ExPASy Swiss-Prot
Match: RL44_KLULA (60S ribosomal protein L44 OS=Kluyveromyces lactis GN=RPL44 PE=3 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 6.842e-42
Identity = 77/104 (74.04%), Postives = 89/104 (85.58%), Query Frame = 1 
Query:   70 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGERRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHLIKRCRHFEIGGDKKGKGTSL 381
            MVNVPKT+KTYCK KECRKH  HKVTQYK GK SL AQG+RRYDRKQSG+GGQTK +FHKKAKTTKK+VLRL+C  CK  +Q  +KRC+HFE+GG+KK KG +L
Sbjct:    1 MVNVPKTRKTYCKGKECRKHAQHKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGEKKQKGQAL 104
[Close]
BLAST of CK935891 vs. ExPASy Swiss-Prot
Match: RL44_DEBOC (60S ribosomal protein L44 OS=Debaryomyces occidentalis GN=RPL44 PE=3 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 8.936e-42
Identity = 78/104 (75.00%), Postives = 89/104 (85.58%), Query Frame = 1 
Query:   70 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGERRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHLIKRCRHFEIGGDKKGKGTSL 381
            MVNVPKT+KTYCK KECRKHT HKVTQYK GK SL AQG+RRYDRKQ GYGGQTK +FHKKAKTTKK+VL+L+C  CK  +Q  +KRC+HFE+GGDKK KG +L
Sbjct:    1 MVNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQRGYGGQTKQIFHKKAKTTKKVVLKLECVVCKTKAQLSLKRCKHFELGGDKKQKGQAL 104
[Close]
BLAST of CK935891 vs. ExPASy Swiss-Prot
Match: RL44_KLUMA (60S ribosomal protein L44 OS=Kluyveromyces marxianus GN=RPL44 PE=3 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 2.600e-41
Identity = 76/104 (73.08%), Postives = 89/104 (85.58%), Query Frame = 1 
Query:   70 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGERRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHLIKRCRHFEIGGDKKGKGTSL 381
            MVNVPKT+KTYCK K CRKH+ HKVTQYK GK SL AQG+RRYDRKQSG+GGQTK +FHKKAKTTKK+VLRL+C  CK  +Q  +KRC+HFE+GG+KK KG +L
Sbjct:    1 MVNVPKTRKTYCKGKACRKHSQHKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGEKKQKGQAL 104
[Close]
BLAST of CK935891 vs. ExPASy Swiss-Prot
Match: RL44_ASHGO (60S ribosomal protein L44 OS=Ashbya gossypii GN=RPL44 PE=3 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 2.201e-40
Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 1 
Query:   70 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGERRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHLIKRCRHFEIGGDKKGKGTSL 381
            MVNVPKT+KTYCK K CRKHT HKVTQYK GK SL AQG+RRYDRKQSG+GGQTK +F KKAKTTKK+VLRL+C  CK  +Q  +KRC+HFE+GG+KK KG +L
Sbjct:    1 MVNVPKTRKTYCKGKACRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKQIFRKKAKTTKKVVLRLECLSCKTKAQLPLKRCKHFELGGEKKQKGQAL 104
[Close]
BLAST of CK935891 vs. ExPASy Swiss-Prot
Match: RL44Q_CANMA (60S ribosomal protein L44 Q OS=Candida maltosa GN=RIM-C PE=3 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 4.903e-40
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 1 
Query:   70 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGERRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHLIKRCRHFEIGGDKKGKGTSL 381
            MVN+PKT+ TYCK K CRKHT+HKVTQYK G+ SL AQG+RRYDRKQSGYGGQTK VFHKKAKTTKKIVL+L+C  CK   Q  +KRC+H E+GG+KK KG +L
Sbjct:    1 MVNIPKTRNTYCKGKGCRKHTIHKVTQYKSGRASLFAQGKRRYDRKQSGYGGQTKQVFHKKAKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQAL 104
The following BLAST results are available for this feature:
BLAST of CK935891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
RL44P_CANMA8.082e-4375.9660S ribosomal protein L44 P OS=Candida maltosa GN=... [more]
RL44_PICGU1.379e-4275.9660S ribosomal protein L44 OS=Pichia guilliermondii... [more]
RL44_YEAST3.071e-4275.9660S ribosomal protein L42 OS=Saccharomyces cerevis... [more]
RL44_SCHPO3.071e-4271.1560S ribosomal protein L44 OS=Schizosaccharomyces p... [more]
RL44_YARLI6.842e-4275.0060S ribosomal protein L44 OS=Yarrowia lipolytica G... [more]
RL44_KLULA6.842e-4274.0460S ribosomal protein L44 OS=Kluyveromyces lactis ... [more]
RL44_DEBOC8.936e-4275.0060S ribosomal protein L44 OS=Debaryomyces occident... [more]
RL44_KLUMA2.600e-4173.0860S ribosomal protein L44 OS=Kluyveromyces marxian... [more]
RL44_ASHGO2.201e-4073.0860S ribosomal protein L44 OS=Ashbya gossypii GN=RP... [more]
RL44Q_CANMA4.903e-4072.1260S ribosomal protein L44 Q OS=Candida maltosa GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004389_E01 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935891 ID=CK935891; Name=CK935891; organism=Citrus sinensis; type=EST; length=597bp
GGGGGGTTACCCTTCGGCAGCAGTTGGAAGTTACGAAGAGCTCTCTCGTC
GTCGCCGCAGCCGGCCATCATGGTGAATGTTCCCAAGACTAAGAAGACTT
ACTGCAAGAGCAAGGAGTGCAGAAAGCACACCTTGCACAAGGTGACACAG
TACAAGAAGGGCAAGGACAGTCTTGCTGCTCAAGGGGAGAGACGGTATGA
TCGCAAGCAGTCTGGCTATGGCGGTCAGACCAAGCCTGTCTTCCACAAGA
AGGCTAAGACCACCAAGAAGATTGTGCTGAGGCTCCAATGCCAGGGTTGT
AAGCATGTGTCTCAACATCTCATCAAGAGGTGCAGGCACTTTGAAATTGG
TGGAGACAAGAAGGGAAAGGGAACATCTCTTTTCTAAATGCCTTTATTTT
TGTTTTTATGCTTTTTACTTTGCTGCACTTGATGGAACATTACCCAGTAT
GAGAATATTTGTTTTAGTTTTGTTGGGTTAGTTTGATGCTGTTAATTTAA
AACTTGAAGCGGTTGTTTGTTAAGTGCTTATTATATCAGTTAATTTTATA
TTTGGATTTTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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