CK935895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935895 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11 Identity = 50/203 (24.63%), Postives = 88/203 (43.35%), Query Frame = 3 Query: 150 KMAQPSVILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAGNPH-IRLFDVTSSSPQPVMSYDQHTNNVMAVGFQ-CDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMT 749 K + +LA+ S D+T+ W+A +G T+ V+ + PN YLA A + H ++L+D + + + + HTN V F G+ + SGS D T+++WD+R+ C E + + V + + + +++ +G IR+WD C L V + V+ G +W G T Sbjct: 47 KFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGA--CLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGHCLKTLFDRDSPPVSFAAFTPNAKYVLCNTLDGRAKLWDYAAGRTRRT 247
BLAST of CK935895 vs. ExPASy Swiss-Prot
Match: LIS1_PIG (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus scrofa GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11 Identity = 63/250 (25.20%), Postives = 105/250 (42.00%), Query Frame = 3 Query: 171 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPN-KHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEY-ESRAAVNTVVLHPNQTE--------------------LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLXKLQAHNGYILKCLLSPEFCEPHRYLATAS 854 +LA+ S D TIK W+ + C RT+ D V+ + I PN H ++AA + I++++V + V ++ H V V DG + S S D TV++W + C+ E E V + P + L+SG ++ I++WD++ C LV D VR + G +++ + T VW N + L AH ++ S +F + Y+ T S Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH-DNWVRGVLFHSGGKFILSCADDKTLRVW-------DYKNKRCMKTLNAHEHFV----TSLDFHKTAPYVVTGS 399
BLAST of CK935895 vs. ExPASy Swiss-Prot
Match: LIS1_CHICK (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11 Identity = 62/250 (24.80%), Postives = 105/250 (42.00%), Query Frame = 3 Query: 171 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPN-KHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEY-ESRAAVNTVVLHPNQTE--------------------LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLXKLQAHNGYILKCLLSPEFCEPHRYLATAS 854 +LA+ S D TIK W+ + C RT+ D V+ + I PN H ++A+ + I++++V + V ++ H V V DG + S S D TV++W + C+ E E V + P + L+SG ++ I++WD++ C LV D VR + G +++ + T VW N + L AH ++ S +F + Y+ T S Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGH-DNWVRGVLFHSGGKFILSCADDKTLRVW-------DFKNKRCMKTLNAHEHFV----TSLDFHKTAPYVVTGS 399
BLAST of CK935895 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11 Identity = 55/235 (23.40%), Postives = 102/235 (43.40%), Query Frame = 3 Query: 174 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAA-AGNPHIRLFDVTSSSPQPVMSYDQ--HTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEYESRA-AVNTVVLHPNQTELISGDQNGNIRVWDLTA----NSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLXKLQAHNGYILKCLLSPEFCEPHRYLATAS 854 LAT + DKT+K W+ + + T + + L+ + + ++ + +G+ +++D+ + ++ N V +V DG + +GS D V++WD + YE +V +V P+ L SG + ++++WDL+ + C D V S+ DGS +++ + + W GT M LQ H ++ LSP+ H AT S Sbjct: 342 LATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKD-FVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHM-------MLQGHKNSVISVALSPK-NNSHGVFATGS 567
BLAST of CK935895 vs. ExPASy Swiss-Prot
Match: WDR69_DANRE (WD repeat-containing protein 69 OS=Danio rerio GN=wdr69 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11 Identity = 51/211 (24.17%), Postives = 97/211 (45.97%), Query Frame = 3 Query: 174 LATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPNKHYLAAAG-NPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDL-RAPVCQMEYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLXKLQAHNGYILK 800 +AT S+DKT K W A++G+C+ T + +++ L P +A + +L+DV S + V + H ++++ F G+ + +GS D T +WD+ + R ++ V + + + + + + + +VWD C L+ D V + + G L+ A+ GT V+ + F+ L +L+ H G I K Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESG--EEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHND-EVLDVCFNYTGQLIATASADGTSRVF-------STDTFQCLCQLEGHKGEISK 350
BLAST of CK935895 vs. ExPASy Swiss-Prot
Match: LIS1_RAT (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11 Identity = 62/250 (24.80%), Postives = 105/250 (42.00%), Query Frame = 3 Query: 171 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPN-KHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEY-ESRAAVNTVVLHPNQTE--------------------LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLXKLQAHNGYILKCLLSPEFCEPHRYLATAS 854 +LA+ S D TIK W+ + C RT+ D V+ + I PN H ++A+ + I++++V + V ++ H V V DG + S S D TV++W + C+ E E V + P + L+SG ++ I++WD++ C LV D VR + G +++ + T VW N + L AH ++ S +F + Y+ T S Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH-DNWVRGVLFHSGGKFILSCADDKTLRVW-------DYKNKRCMKTLNAHEHFV----TSLDFHKTAPYVVTGS 399
BLAST of CK935895 vs. ExPASy Swiss-Prot
Match: LIS1_PONAB (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11 Identity = 62/250 (24.80%), Postives = 105/250 (42.00%), Query Frame = 3 Query: 171 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPN-KHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEY-ESRAAVNTVVLHPNQTE--------------------LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLXKLQAHNGYILKCLLSPEFCEPHRYLATAS 854 +LA+ S D TIK W+ + C RT+ D V+ + I PN H ++A+ + I++++V + V ++ H V V DG + S S D TV++W + C+ E E V + P + L+SG ++ I++WD++ C LV D VR + G +++ + T VW N + L AH ++ S +F + Y+ T S Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH-DNWVRGVLFHSGGKFILSCADDKTLRVW-------DYKNKRCMKTLNAHEHFV----TSLDFHKTAPYVVTGS 399
BLAST of CK935895 vs. ExPASy Swiss-Prot
Match: LIS1_MOUSE (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus GN=Pafah1b1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11 Identity = 62/250 (24.80%), Postives = 105/250 (42.00%), Query Frame = 3 Query: 171 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPN-KHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEY-ESRAAVNTVVLHPNQTE--------------------LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLXKLQAHNGYILKCLLSPEFCEPHRYLATAS 854 +LA+ S D TIK W+ + C RT+ D V+ + I PN H ++A+ + I++++V + V ++ H V V DG + S S D TV++W + C+ E E V + P + L+SG ++ I++WD++ C LV D VR + G +++ + T VW N + L AH ++ S +F + Y+ T S Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH-DNWVRGVLFHSGGKFILSCADDKTLRVW-------DYKNKRCMKTLNAHEHFV----TSLDFHKTAPYVVTGS 399
BLAST of CK935895 vs. ExPASy Swiss-Prot
Match: LIS1_HUMAN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo sapiens GN=PAFAH1B1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11 Identity = 62/250 (24.80%), Postives = 105/250 (42.00%), Query Frame = 3 Query: 171 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPN-KHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEY-ESRAAVNTVVLHPNQTE--------------------LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLXKLQAHNGYILKCLLSPEFCEPHRYLATAS 854 +LA+ S D TIK W+ + C RT+ D V+ + I PN H ++A+ + I++++V + V ++ H V V DG + S S D TV++W + C+ E E V + P + L+SG ++ I++WD++ C LV D VR + G +++ + T VW N + L AH ++ S +F + Y+ T S Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH-DNWVRGVLFHSGGKFILSCADDKTLRVW-------DYKNKRCMKTLNAHEHFV----TSLDFHKTAPYVVTGS 399
BLAST of CK935895 vs. ExPASy Swiss-Prot
Match: LIS1_BOVIN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos taurus GN=PAFAH1B1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11 Identity = 62/250 (24.80%), Postives = 105/250 (42.00%), Query Frame = 3 Query: 171 ILATASYDKTIKFWEAKSGRCYRTIQYPDSQVNRLEITPN-KHYLAAAGNPHIRLFDVTSSSPQPVMSYDQHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPVCQMEY-ESRAAVNTVVLHPNQTE--------------------LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLXKLQAHNGYILKCLLSPEFCEPHRYLATAS 854 +LA+ S D TIK W+ + C RT+ D V+ + I PN H ++A+ + I++++V + V ++ H V V DG + S S D TV++W + C+ E E V + P + L+SG ++ I++WD++ C LV D VR + G +++ + T VW N + L AH ++ S +F + Y+ T S Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH-DNWVRGVLFHSGGKFILSCADDKTLRVW-------DYKNKRCMKTLNAHEHFV----TSLDFHKTAPYVVTGS 399 The following BLAST results are available for this feature:
BLAST of CK935895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935895 ID=CK935895; Name=CK935895; organism=Citrus sinensis; type=EST; length=857bpback to top |