CK935896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_SODGM (RNA pyrophosphohydrolase OS=Sodalis glossinidius (strain morsitans) GN=rppH PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.668e-18 Identity = 61/158 (38.61%), Postives = 82/158 (51.90%), Query Frame = 3 Query: 195 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEV--LAEVPYWLTYDFPPEVREKLKHQWGGDWK----GQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 650 +GYR NVGI + N ++ A R SWQ PQGGI+ E + A REL EE G+S +V LA WL Y P K +W D K GQ QKWFLL+ + +IN+ + PEF W+W+S + + V FK+ VY+ V F+ Sbjct: 5 DGYRPNVGIVICNLDGQVLWARRYG-QHSWQFPQGGINAGETAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLP-----KRLVRW--DTKPVCIGQKQKWFLLQLLCPDADINM--QRGGIPEFDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFS 152
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_PSYIN (RNA pyrophosphohydrolase OS=Psychromonas ingrahamii (strain 37) GN=rppH PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18 Identity = 56/150 (37.33%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 195 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEV--LAEVPYWLTYDFPPEVREKLKHQWGGD---WKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYK 629 +GYR NVGI + N++ ++ A R SWQ PQGGI E E P+ A REL EE G+ V LA +WL Y P K +W GQ Q+WFLL+ E++I + PEF W+W++ + + V FK VY+ Sbjct: 5 DGYRPNVGIIICNNNAQVLWAKRFG-QHSWQFPQGGIKEGETPEQAMYRELYEEVGLKPEHVKLLATSRHWLRYKLP-----KRLVRWDSPDPVCIGQKQRWFLLQLISDEQQIEF--EACGNPEFDAWRWVTYWYPVRQVVSFKCEVYR 146
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_BLOFL (RNA pyrophosphohydrolase OS=Blochmannia floridanus GN=rppH PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 60/153 (39.22%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 198 GYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVSSAEV--LAEVPYWLTYDFPPE-VREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 647 GYR NVGI L N+ ++ A R SWQ PQGGI+ E P+ A REL EE G++ +V L+ W Y P + VR ++K GQ QKWFLLK K+ +IN+ S+ F W+W+S + + V FK+ VY++V F Sbjct: 6 GYRLNVGIVLCNTYGQVLWAKRYK-QCSWQFPQGGINIGETPEQAMYRELFEEIGLNYCDVRILSITRCWFCYKLPTQLVRWRIKPL----CLGQKQKWFLLKLLSKDTKINM--KTSKVCTFDTWQWVSLWYPIRQVVFFKRHVYRKVMKEF 151
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_NITOC (RNA pyrophosphohydrolase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rppH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 52/155 (33.55%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 195 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEET--GVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTP 653 +G+R NVG+ L N ++ A R +WQ PQGG+ E+E + AA REL+EE GV +++ WL Y P +++ GQ Q W+L +F G+E+++ L + ++KPEF W W++ L V FK+ VY+ P Sbjct: 5 DGFRANVGLILCNQDDRVLWARRAR-EKAWQFPQGGVKESETTEEAAYRELEEEVGLGVEHVKIIGCTRSWLRYRLP---NRYVRYGNKPLCIGQKQIWYLFRFVGEEQDVQL--NLTDKPEFDYWCWVNYWYPLREIVYFKRKVYQRALNELAP 153
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_PSYA2 (RNA pyrophosphohydrolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=rppH PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17 Identity = 56/157 (35.67%), Postives = 78/157 (49.68%), Query Frame = 3 Query: 195 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGV--SSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 659 +G+R NVGI L N+ ++ A R+ ++WQ PQGGID E P A REL EE G+ ++LA WL Y P + ++H GQ QKWFLL+ E + K EF W+W+S L + + FK+ VY+ P L Sbjct: 5 DGFRANVGIILANTQGQVLWAKRIG-HNAWQFPQGGIDRGETPMDAMYRELWEEVGLHPRHVDLLAVTQDWLRYRLP---KRYVRHGQYPLCIGQKQKWFLLRL--DEPNTQHIRFDEGKAEFDNWQWVSYWYPLGQVIHFKRGVYRRALQELVPEL 155 The following BLAST results are available for this feature:
BLAST of CK935896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 325
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935896 ID=CK935896; Name=CK935896; organism=Citrus sinensis; type=EST; length=841bpback to top |