EY756596

Overview
NameEY756596
Unique NameEY756596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length530
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 1 
Query:    1 PRVRVDLPRWVRSVVREEWTAEVFDVELLK-YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 210
            P   +DLP+WV S+V+EEWT EVFD+EL++  Q V +E++  L++AL CV   P +RP+ + VV  +E+I+
Sbjct:  739 PTNGMDLPQWVASIVKEEWTNEVFDLELMRETQSVGDELLNTLKLALHCVDPSPAARPEANQVVEQLEEIR 809
[Close]
BLAST of EY756596 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.397e-12
Identity = 31/66 (46.97%), Postives = 49/66 (74.24%), Query Frame = 1 
Query:   13 VDLPRWVRSVVREEWTAEVFDVELLKYQ-DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 207
            VDLPRWV+SV  ++  ++V D EL +YQ +  E ++++L+I +SC A+ PDSRP M +V R+IE++
Sbjct:  550 VDLPRWVQSVTEQQTPSDVLDPELTRYQPEGNENIIRLLKIGMSCTAQFPDSRPSMAEVTRLIEEV 615
The following BLAST results are available for this feature:
BLAST of EY756596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
IMK2_ARATH5.664e-1246.48Probably inactive leucine-rich repeat receptor-lik... [more]
Y3288_ARATH7.397e-1246.97Probable inactive receptor kinase At3g02880 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-D07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756596 ID=EY756596; Name=EY756596; organism=Citrus sinensis; type=EST; length=530bp
CCACGCGTCCGGGTTGATCTTCCAAGATGGGTCCGTTCTGTTGTTCGCGA
GGAATGGACAGCCGAGGTGTTTGATGTTGAGCTACTGAAGTACCAAGATG
TTGAAGAGGAGATGGTGCAGATGCTACAGATTGCATTGTCATGTGTAGCA
AAGGTCCCAGACTCTAGGCCAAAAATGGATGACGTTGTTAGAATGATAGA
ACAAATTCAACAACCTGAGTTGAGGAACAGGGCATCTTCTGGAACTGAAT
CTAATGTCCAAACACCCTGATTGCTTTGAACATTTTGCATTATGCTTCAA
GCCAACTTTGTTTGTTTGTTCAATAACCATGTTGAGCTAAGATACATTTG
TATGTTGGGCCATTCTCCCTGAATTCGTTGAATTAGTGAATTTCAAATTC
AGCTTGTGGTACTATTTTTTTTATTTTTTATTTTTTGTAAATATGTGTGT
AACTGTTGTGCTTACTTTGGAAAATATTGCAGCTGCCTCATACTCACTCA
TTCATATTTAATATATGGCGCCCATTGTTN
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