GE213143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.291e-27 Identity = 58/127 (45.67%), Postives = 78/127 (61.42%), Query Frame = -1 Query: 41 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPN 379 A KR+LKEL+ L KD P AGP +E+ +F W I GPPD+PYA GVF + FP DYP PPK+ F + HPNI NG +C+ IL +E+WSP ++ K+LLS+ S+L++PN Sbjct: 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPN 131
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.291e-27 Identity = 76/250 (30.40%), Postives = 124/250 (49.60%), Query Frame = 2 Query: 371 LRSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSL 1114 ++ M D + ++D GAG +GLS AY L+K ++ + E+ +S GGG LF +++ KPA L E+ + E + V + +A F + + + + K+ + V +D+I + RV GV W M +DP + AK VV + GHD + +++ +G++ +PG K+ AE+ V T +V G+ GM V E+ G PRMGP FGAM++S + A K L Sbjct: 18 IKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.291e-27 Identity = 76/250 (30.40%), Postives = 124/250 (49.60%), Query Frame = 2 Query: 371 LRSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSL 1114 ++ M D + ++D GAG +GLS AY L+K ++ + E+ +S GGG LF +++ KPA L E+ + E + V + +A F + + + + K+ + V +D+I + RV GV W M +DP + AK VV + GHD + +++ +G++ +PG K+ AE+ V T +V G+ GM V E+ G PRMGP FGAM++S + A K L Sbjct: 18 IKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.291e-27 Identity = 76/250 (30.40%), Postives = 124/250 (49.60%), Query Frame = 2 Query: 371 LRSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSL 1114 ++ M D + ++D GAG +GLS AY L+K ++ + E+ +S GGG LF +++ KPA L E+ + E + V + +A F + + + + K+ + V +D+I + RV GV W M +DP + AK VV + GHD + +++ +G++ +PG K+ AE+ V T +V G+ GM V E+ G PRMGP FGAM++S + A K L Sbjct: 18 IKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.291e-27 Identity = 76/250 (30.40%), Postives = 124/250 (49.60%), Query Frame = 2 Query: 371 LRSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSL 1114 ++ M D + ++D GAG +GLS AY L+K ++ + E+ +S GGG LF +++ KPA L E+ + E + V + +A F + + + + K+ + V +D+I + RV GV W M +DP + AK VV + GHD + +++ +G++ +PG K+ AE+ V T +V G+ GM V E+ G PRMGP FGAM++S + A K L Sbjct: 18 IKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.291e-27 Identity = 76/250 (30.40%), Postives = 124/250 (49.60%), Query Frame = 2 Query: 371 LRSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSL 1114 ++ M D + ++D GAG +GLS AY L+K ++ + E+ +S GGG LF +++ KPA L E+ + E + V + +A F + + + + K+ + V +D+I + RV GV W M +DP + AK VV + GHD + +++ +G++ +PG K+ AE+ V T +V G+ GM V E+ G PRMGP FGAM++S + A K L Sbjct: 18 IKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAIDA-GAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.291e-27 Identity = 79/242 (32.64%), Postives = 127/242 (52.48%), Query Frame = 2 Query: 395 ITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIE-EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSL 1114 + Y D D G G A L A L++ ++AI EQ +S GGG W G +F +VV++ A LD+ GI Y E + + ++ +++ + ++FN V+ ED++++ RV G+V NW V+ + +DP ++ K+V+ GHD T ++++ + + E + G K + E V T+E+ PG+IV GM APRMGP FG M++S +KAA LAL L Sbjct: 21 LEYTDIDVALVGGGPANLVAAKYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRVLDDFGIRYKEYEPGYFVANSVESVGKLIAGATSA-GAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHDAVVCNTILRKIPNAKIGEFGILGEKPMWSEVGERLAVDATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.291e-27 Identity = 82/273 (30.04%), Postives = 135/273 (49.45%), Query Frame = 2 Query: 374 RSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGI--DYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSL 1114 R + + +TD G G +GL A EL+ ++ + IIE++ GGG WL G L + + VR PA LD+LG+ +YDE++ + + A S +++ ++ N D++V+ V G V NW V +C+DP +EA VVV + GHD G A G++ ++ + GM + + PG ++ + +ED +V T +V G++ G+ A + G RMGPTFGAM++S + AA+ + L Sbjct: 20 RQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMITAA-CDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.291e-27 Identity = 82/273 (30.04%), Postives = 135/273 (49.45%), Query Frame = 2 Query: 374 RSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGI--DYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSL 1114 R + + +TD G G +GL A EL+ ++ + IIE++ GGG WL G L + + VR PA LD+LG+ +YDE++ + + A S +++ ++ N D++V+ V G V NW V +C+DP +EA VVV + GHD G A G++ ++ + GM + + PG ++ + +ED +V T +V G++ G+ A + G RMGPTFGAM++S + AA+ + L Sbjct: 20 RQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMITAA-CDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 8.217e-27 Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = -1 Query: 26 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 373 +RI+KE + L +P A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121 The following BLAST results are available for this feature:
BLAST of GE213143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 319
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213143 ID=GE213143; Name=GE213143; organism=Citrus sinensis; type=EST; length=1162bpback to top |