GE213143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 4.795e-43 Identity = 80/119 (67.23%), Postives = 97/119 (81.51%), Query Frame = -1 Query: 23 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 379 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GPP S Y GGVF + I F PDYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV Sbjct: 56 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 174
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 4.059e-42 Identity = 79/119 (66.39%), Postives = 96/119 (80.67%), Query Frame = -1 Query: 23 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 379 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GPP S Y GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 4.059e-42 Identity = 79/119 (66.39%), Postives = 96/119 (80.67%), Query Frame = -1 Query: 23 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 379 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GPP S Y GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 4.059e-42 Identity = 79/119 (66.39%), Postives = 96/119 (80.67%), Query Frame = -1 Query: 23 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 379 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GPP S Y GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV 180
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_PYRHO (Putative thiazole biosynthetic enzyme OS=Pyrococcus horikoshii GN=PH1357 PE=3 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 2.909e-40 Identity = 100/259 (38.61%), Postives = 143/259 (55.21%), Query Frame = 2 Query: 338 LLQILEFLQNTLRSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSL 1114 +L+ + + + S+ D++ + D GAG +G+ AY L+K ++AI E+ +S GGG W G F+ +VV+ A LDE GI Y+E + + A +TI SK++ + VK+FN + EDL++K RV G+V NW V M +DP +EAK V+ S GH VKR G+++E+PG A+ E V+ TREV PG+ VTGM I GAPRMGP FG M +S +KAA LK L Sbjct: 1 MLREVTITRAIVESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQDEAREILDEFGIRYEEFEKGYYVADAIEVATTIASKVV-KSGVKIFNMIEVEDLVIKDNRVSGIVINWTPVLM---AGLHVDPLTIEAKYVIDSTGHGAQVAQFLVKR----GLLKEIPGEGAMWAEQGEKLTVKNTREVFPGLYVTGMAANAIAGAPRMGPIFGGMFLSGRKAAQEILKKL 250
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_PYRFU (Putative thiazole biosynthetic enzyme OS=Pyrococcus furiosus GN=PF1530 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.463e-39 Identity = 99/249 (39.76%), Postives = 138/249 (55.42%), Query Frame = 2 Query: 371 LRSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSLG 1117 + S+ D++ + D GAG +G+ Y L+K ++AI E+ +S GGG W G F+ +VV++ A LDE I Y+E + + A +TI SK + + VK+FN V EDL+VK RV G+V NW V M T +DP +EAK V+ S GH GA + L G+IE++PG A+ E V T+EV PG+ VTGM + GAPRMGP FG M +S +KAA L+ LG Sbjct: 12 VESYFKDLLNNLELDVAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKIVVQEEAKEILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMVEVEDLVVKDDRVSGIVINWTPVKM---TGLHVDPLTVEAKYVIDSTGH----GAQVTQFLLKRGLIEKIPGEGAMWAEMGEKLTVENTKEVFPGLYVTGMAANAVSGAPRMGPIFGGMFLSGRKAAMEILQKLG 251
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_PYRAB (Putative thiazole biosynthetic enzyme OS=Pyrococcus abyssi GN=PYRAB07910 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.463e-39 Identity = 100/248 (40.32%), Postives = 137/248 (55.24%), Query Frame = 2 Query: 371 LRSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSL 1114 + S+ D++ + D GAG +G+ AY L+K ++AI E+ +S GGG W G F+ +VV++ A LDE I Y+E + + A +TI SK + + VK+FN + EDL+VK RV G+V NW V M T +DP +EAK V+ S GH GA + L G+IE +PG A+ E V TREV PG+ VTGM I GAPRMGP FG M +S +KAA L+ L Sbjct: 12 IESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQEEAREILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMIEVEDLVVKDNRVSGIVINWTPVLM---TGLHVDPLTVEAKYVIDSTGH----GAQVAQFLLKRGLIERIPGEGAMWAEQGERLTVENTREVFPGLYVTGMAANAIAGAPRMGPIFGGMFLSGKKAAQEILEKL 250
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_PYRKO (Putative thiazole biosynthetic enzyme OS=Pyrococcus kodakaraensis GN=TK0434 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.222e-38 Identity = 96/257 (37.35%), Postives = 141/257 (54.86%), Query Frame = 2 Query: 350 LEFLQNTLRSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSLGQ 1120 +E + + ++ D++ D GAG +G+ Y L+K ++AI E+ +S GGG W F+ +VV++ A LDE G+DY + + + + + ST+ SK + + K+FN V EDL+VK GRV G+V NW V M T +DP +EAK VV S GH GA + L G+I+ +PG + E+ V TREV PG+ TGM + GAPRMGP FG M++S +KAA L+ LG+ Sbjct: 4 IEISRAIVEAYFNDLLQNLQLDIAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSVGGGIWGGAMGFNRVVVQESAREILDEFGVDYSQVGNGLYVLDSIELASTLASKAV-KAGAKIFNMVEVEDLVVKDGRVSGLVINWTPVMM---TGLHVDPLTVEAKFVVDSTGH----GAQISQHLLKRGLIKAIPGEGPMWAEKGEELTVEHTREVFPGLYATGMAANALAGAPRMGPIFGGMLLSGRKAALEILQKLGK 251
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: THI4_AERPE (Putative thiazole biosynthetic enzyme OS=Aeropyrum pernix GN=APE_2149.1 PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 5.314e-34 Identity = 89/257 (34.63%), Postives = 140/257 (54.47%), Query Frame = 2 Query: 347 ILEFLQNTLRSHMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISRQKAAHLALKSLG 1117 IL+ ++L+ H+ +D GAG AGL+ A+ L++ ++ I+EQ+ GGG WL G + + +R PA LDEL + Y+ + L + + ++ L ++ N +D+IV+ RV GVV NW+ V +C+DP + A+ VV + GHD A ++L GM+E + + + +ED +V T EV PG++V G+ VAE+ G PRMGPTFGAM++S +KAA L + LG Sbjct: 15 ILDGFYSSLKKHLR-------SDVIVVGAGPAGLTAAWRLAE-AGARVLIVEQNNYLGGGLWLGGYFMNPVTIRAPAQRILDELEVPYEAVKPGLYRTKGPLLAAKLAARAL-EAGAEVLNLTMLDDVIVENSRVAGVVVNWSPVQGLPRQITCVDPVGLRAEYVVDATGHD----AVVTRKLAERGMVE-ASKLGPMWVERSEDLVVEKTGEVYPGLVVAGIAVAEVYGLPRMGPTFGAMLLSGEKAAALIGEKLG 257
BLAST of GE213143 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 4.498e-33 Identity = 60/123 (48.78%), Postives = 89/123 (72.36%), Query Frame = -1 Query: 11 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPARA 379 + KRI +E+ +L DPP CSAGP ++++HW ATI+GP +PY GG+F + I FP DYPFKPPK+ F+T+++H N+++ G + ++IL++ WSPALTI+KVL +I S+ P P P +P A Sbjct: 37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIA 159 The following BLAST results are available for this feature:
BLAST of GE213143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 319
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213143 ID=GE213143; Name=GE213143; organism=Citrus sinensis; type=EST; length=1162bpback to top |