EY736436

Overview
NameEY736436
Unique NameEY736436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.165e-43
Identity = 94/172 (54.65%), Postives = 119/172 (69.19%), Query Frame = 2
Query:  194 RLDVAEFAGLRANAGATYATGARDASFF-------DAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            R   A+F+G++    ++    A+  S F       DA   +++  VAA   P  K     ++VAINGFGRIGRNF+RCW GR DS ++VV +ND+ GVK ASHLLKYDS+LGTF ADV     +TISV+GK IK+VSNR+PLQLPW E+ IDIV+E TGVFVD PGAGKHI+
Sbjct:   24 RSTFAQFSGMKKVNQSSRLQPAQSGSAFGGYSDANDAFYTRVSGIVAATFGPTMK-----VRVAINGFGRIGRNFIRCWAGRSDSNMEVVCINDTSGVKTASHLLKYDSILGTFDADVS-AGEDTISVNGKTIKIVSNRNPLQLPWKEMNIDIVVEATGVFVDAPGAGKHIE 189          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.440e-43
Identity = 99/189 (52.38%), Postives = 126/189 (66.67%), Query Frame = 2
Query:  158 TTHSFPTQCSTKRLDVAEFAGLR----------ANAGATYATGARDAS--FFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +T S    CS  R   A+F+GL+          A  G+ +  G  DA+  FF+AV     P   + +  +K      ++VAINGFGRIGRNF+RCW GR DS +DVV +ND+ GVK ASHLLKYDS+LGTF +DV +   ++I+VDGK IKVVSNR+PL+LPW E+ IDIV+E TGVFVD  GAGKHIQ
Sbjct:   12 STSSKSAVCSG-RSSFAQFSGLKKVNNTARLQTAEQGSAFG-GVSDANDAFFNAVNTMGAPARTSNAPSMK------VRVAINGFGRIGRNFIRCWAGRTDSNMDVVCINDTSGVKTASHLLKYDSILGTFDSDV-VAGEDSITVDGKTIKVVSNRNPLELPWKEMEIDIVVEATGVFVDAVGAGKHIQ 191          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.811e-38
Identity = 81/130 (62.31%), Postives = 98/130 (75.38%), Query Frame = 2
Query:  368 NGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQL-VPXSYYHCSSQRCRLSTYVVG 754
            NGFGRIGRNFLRC   R++S L+V+ +NDSGGVK ASHLLKYDS LG F ADVKIVD+  ISV+GK I+VVS+RDP +LPW E+ ID+VIEGTGVF+D PGA KHI+           ++   + TYVVG
Sbjct:    1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSGGVKQASHLLKYDSTLGKFDADVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIEAGAKKVLITAPAKGSDIPTYVVG 130          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 1.485e-32
Identity = 72/134 (53.73%), Postives = 91/134 (67.91%), Query Frame = 2
Query:  356 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQL-VPXSYYHCSSQRCRLSTYVVG 754
            +VAINGFGRIGRNFLRCW GR DS L+VV +ND+   +  +HLL+YDS+LG   AD+   D  +I+V+GK IK VS+R+PL LPWAE  +D+VIE TGVFV   GA KH+Q            +   + TYVVG
Sbjct:    3 RVAINGFGRIGRNFLRCWLGRTDSQLEVVGINDTSDPRTNAHLLRYDSMLGKLDADIS-ADENSITVNGKTIKCVSDRNPLNLPWAEWNVDLVIEATGVFVTHEGATKHVQAGAKKVLITAPGKGPNIGTYVVG 135          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.961e-29
Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            ++VAINGFGRIGRNF RCW GR+++ +++V VND+   +  +HLLKYDS+LG  K      D+ +I+V+GK IK VS+R+P  LPW E  ID++IE TGVFV   GA KHI
Sbjct:    2 IRVAINGFGRIGRNFARCWLGRENTNIELVAVNDTSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIEATGVFVSKEGATKHI 112          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.699e-28
Identity = 63/134 (47.01%), Postives = 87/134 (64.93%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQLVPXSYYHCSSQRCRLSTYVVG 754
            ++VAINGFGRIGRNF RCW GR++S +++V VND+   +  +HLLKYDS+LG  K      D+ +I+V+GK IK VS+R+P  LPW E  ID++IE TGVF    GA KH+          +  +    T+V+G
Sbjct:    2 IRVAINGFGRIGRNFARCWLGRENSNIELVAVNDTSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIESTGVFTSKEGALKHVNAGAKKVLITAPGKNEDGTFVIG 135          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.967e-28
Identity = 59/112 (52.68%), Postives = 80/112 (71.43%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +KV INGFGRIGR+F R   GR++  +++V +ND    K+ +HLLKYDS+ G FK  V+  D ++I VDGK IKV + +DP Q+PW +LG+D+VIE TGVF D   A KH+Q
Sbjct:    3 IKVGINGFGRIGRSFFRASWGREE--IEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKD-DSIVVDGKEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQ 111          

HSP 2 Score: 28.1054 bits (61), Expect = 1.967e-28
Identity = 17/45 (37.78%), Postives = 21/45 (46.67%), Query Frame = 3
Query:  699 KVIITAPAKGADFQPMSLDLRERVEPK------GATLGGQCIGPC 815
            KVIITAPAK  D   +     E+  PK       A+    C+ PC
Sbjct:  116 KVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAPC 160          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_STRCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces coelicolor GN=gap PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.917e-25
Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            ++V INGFGRIGRN+ R     + + +++V VND G     +HLLKYD++LG  KA+V   + +TI+VDGK IKV+S R+P  +PW ELG+DIVIE TG+F     A KHI
Sbjct:    3 IRVGINGFGRIGRNYFRALL-EQGADIEIVAVNDLGDTATTAHLLKYDTILGRLKAEVSHTE-DTITVDGKTIKVLSERNPADIPWGELGVDIVIESTGIFTKKADAEKHI 111          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_STRAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces arenae GN=gap PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.040e-22
Identity = 54/111 (48.65%), Postives = 70/111 (63.06%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            +++ INGFGRIGRN  R    R  S L++V VND G V   +HLL YDS+LG F  +V   +   I V  + IKV++ RDP  LPW +LG+DIVIE TG+F D   A  H+
Sbjct:    3 VRIGINGFGRIGRNVFRAAAARS-SELEIVAVNDLGDVPTMAHLLAYDSILGRFPEEVT-AEPGAIRVGDRTIKVLAERDPGALPWGDLGVDIVIESTGIFTDAAKARSHV 111          

HSP 2 Score: 24.2534 bits (51), Expect = 1.040e-22
Identity = 16/49 (32.65%), Postives = 23/49 (46.94%), Query Frame = 3
Query:  699 KVIITAPAKGADFQPMSLDLRERVEPKGATLGGQCIGPCNEMGTLSRAL 845
            KVII APA G DF  +        +P+  T+        N +G L++ L
Sbjct:  117 KVIIAAPASGEDFTVVLGVNDGDYDPERHTIISNASCTTNCLGVLAKVL 165          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.353e-22
Identity = 55/111 (49.55%), Postives = 71/111 (63.96%), Query Frame = 2
Query:  356 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +VAINGFGRIGR   R  + RK+  ++VV +ND    K  +HLLKYDS+   F   V+  +N  I VDGK IKV +  DP +LPW +LG+D VIE TGVF +   A  H+Q
Sbjct:    3 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLI-VDGKEIKVFAEPDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQ 112          

HSP 2 Score: 25.0238 bits (53), Expect = 1.353e-22
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  699 KVIITAPAKGAD 734
            KVIITAPAKG D
Sbjct:  117 KVIITAPAKGED 128          
The following BLAST results are available for this feature:
BLAST of EY736436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
G3PA_CHOCR4.165e-4354.65Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]
G3PA_GRAVE5.440e-4352.38Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]
G3PA_SCEVA1.811e-3862.31Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3P2_SYNY31.485e-3253.73Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Syne... [more]
G3P2_ANASP9.961e-2954.95Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anab... [more]
G3P2_ANAVT1.699e-2847.01Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anab... [more]
G3P_AQUAE1.967e-2852.68Glyceraldehyde-3-phosphate dehydrogenase OS=Aquife... [more]
G3P_STRCO3.917e-2551.35Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_STRAE1.040e-2248.65Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_THEMA1.353e-2249.55Glyceraldehyde-3-phosphate dehydrogenase OS=Thermo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-C10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736436 ID=EY736436; Name=EY736436; organism=Citrus sinensis; type=EST; length=879bp
CACGCGTCCGCTGAATTTAACCGCATAAATAGCTAGGAGAACTTAGTCTC
TCAGCTTTAGAAGTTGCAGCAAATCAGCAACTAAGCCACAGGCCATGGCC
AGTCACTCAGCTCTTGCTCCCTCAAGAATCCCGGCCATCACTAGGATTCC
ATCCAAGACTACTCACTCTTTTCCCACTCAATGCTCCACCAAGAGGCTGG
ATGTGGCTGAATTCGCTGGCCTTCGAGCAAATGCAGGCGCGACATACGCC
ACTGGTGCTAGAGATGCATCCTTCTTTGATGCTGTGACTGCTCAACTTAC
TCCTAAGGTTGCAGCAGGATCAGTTCCTGTAAAGAAAGAAACCGTGGCCA
AATTGAAGGTGGCAATTAATGGATTTGGACGTATTGGCAGGAACTTCCTC
CGATGCTGGCACGGCAGGAAAGACTCACCCCTTGATGTTGTTGTTGTCAA
TGACAGTGGTGGTGTCAAGAATGCTTCACACCTTCTAAAATATGACTCAT
TGCTTGGAACTTTTAAAGCAGACGTGAAAATAGTGGACAACGAGACCATC
TCTGTCGATGGTAAGCTCATCAAGGTTGTCTCTAACAGGGACCCTCTCCA
GCTCCCTTGGGCTGAGCTCGGAATTGACATCGTTATTGAAGGGACAGGAG
TTTTTGTGGACGGGCCTGGTGCTGGAAAGCACATCCAGCTGGTGCCANAA
AGTTATTATCACTGCTCCAGCCAAAGGTGCAGACTTTCAACCTATGTCGT
TGGATTTACGAGAAAGAGTAGAACCCAAGGGTGCAACCTTGGGAGGTCAA
TGTATCGGGCCTTGTAATGAAATGGGCACTCTTTCCCGTGCATTAGCTTG
TTAACGAGTTGGGGTCGCGGCAAGGGTCT
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