EY736436

Overview
NameEY736436
Unique NameEY736436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P1_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MRSA252) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.545e-16
Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIE 111          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.545e-16
Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIE 111          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P1_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.545e-16
Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIE 111          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P1_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain COL) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.545e-16
Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIE 111          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16
Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = 2
Query:  344 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +A  KV INGFGRIGR   R  +  +   +D+V VND     + A+++LKYDS  G FK D+K++ ++ + V+GK +K  + RDP  +PWAE     V+E TGVF     A  H++
Sbjct:    1 MAPTKVGINGFGRIGRIVFR--NAIEHDDIDIVAVNDPFIETEYAAYMLKYDSTHGQFKGDIKVL-SDGLEVNGKKVKFYTERDPANIPWAESEAYYVVESTGVFTTTEKAKAHLK 113          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +KV INGFGRIGR   R  H   D  +++V VND     + A+++LKYDS  G FK DV +  ++ + V GK ++  + RDP  +PW+E G D ++E TGVF     A  H++
Sbjct:    3 VKVGINGFGRIGRIVFRNAHEHSD--VEIVAVNDPFIEPHYAAYMLKYDSQHGNFKGDVTVEGSDLV-VGGKKVRFYTERDPAAIPWSETGADYIVESTGVFTTTEKAKAHLK 112          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.669e-16
Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            + V++NGFGRIGR   R    RKD  +++V +ND       A+++ KYDS  G F  +V   D + I ++GK + V + +DP  LPW +LG+D+ I+ TG+F +   A KHI+
Sbjct:    2 VNVSVNGFGRIGRLVTRIAISRKD--INLVAINDPFISTDYAAYMFKYDSTHGRFDGEVSH-DKDHIILNGKKVAVFNEKDPAALPWGKLGVDVAIDSTGIFKEMDSANKHIE 111          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.669e-16
Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +KV INGFGRIGR   R  +  + + +D+V VND     + A+++LKYDS  G FK D+K VD   ++V+GK I+    +DP  +PW+E G   V+E TGVF     A  H++
Sbjct:    3 VKVGINGFGRIGRIVFR--NAIEHNDVDIVAVNDPFIEPHYAAYMLKYDSTHGQFKGDIK-VDGNNLTVNGKTIRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLK 112          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.404e-16
Identity = 49/112 (43.75%), Postives = 68/112 (60.71%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            +++AINGFGRIGR  LR    RK+  ++VV +ND    V  A+++ KYDS  G F  +V   D +++ +DGK + V   RDP  LPW    IDI I+ TG+F +   A KHI
Sbjct:    2 VRIAINGFGRIGRLVLRIALSRKN--IEVVAINDPFITVDYAAYMFKYDSTHGRFDGEVSH-DGKSLIIDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHI 110          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P1_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=TDH1 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 7.404e-16
Identity = 51/113 (45.13%), Postives = 69/113 (61.06%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN--ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            +++AINGFGRIGR  LR    RKD  ++VV VND   + N  A++++KYDS  G +K  V   D++ I +DG  I     RDP  LPW  L ID+ ++ TGVF +   A KHI
Sbjct:    2 IRIAINGFGRIGRLVLRLALQRKD--IEVVAVNDPF-ISNDYAAYMVKYDSTHGRYKGTVSH-DDKHIIIDGVKIATYQERDPANLPWGSLKIDVAVDSTGVFKELDTAQKHI 110          
The following BLAST results are available for this feature:
BLAST of EY736436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
G3P1_STAAR2.545e-1644.64Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAN2.545e-1644.64Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAM2.545e-1644.64Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAC2.545e-1644.64Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P_SCLSC4.341e-1641.38Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_CRYPA4.341e-1641.59Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P_ZYGRO5.669e-1639.82Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3P_COCHE5.669e-1642.48Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P2_KLUMA7.404e-1643.75Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P1_YEAST7.404e-1645.13Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-C10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736436 ID=EY736436; Name=EY736436; organism=Citrus sinensis; type=EST; length=879bp
CACGCGTCCGCTGAATTTAACCGCATAAATAGCTAGGAGAACTTAGTCTC
TCAGCTTTAGAAGTTGCAGCAAATCAGCAACTAAGCCACAGGCCATGGCC
AGTCACTCAGCTCTTGCTCCCTCAAGAATCCCGGCCATCACTAGGATTCC
ATCCAAGACTACTCACTCTTTTCCCACTCAATGCTCCACCAAGAGGCTGG
ATGTGGCTGAATTCGCTGGCCTTCGAGCAAATGCAGGCGCGACATACGCC
ACTGGTGCTAGAGATGCATCCTTCTTTGATGCTGTGACTGCTCAACTTAC
TCCTAAGGTTGCAGCAGGATCAGTTCCTGTAAAGAAAGAAACCGTGGCCA
AATTGAAGGTGGCAATTAATGGATTTGGACGTATTGGCAGGAACTTCCTC
CGATGCTGGCACGGCAGGAAAGACTCACCCCTTGATGTTGTTGTTGTCAA
TGACAGTGGTGGTGTCAAGAATGCTTCACACCTTCTAAAATATGACTCAT
TGCTTGGAACTTTTAAAGCAGACGTGAAAATAGTGGACAACGAGACCATC
TCTGTCGATGGTAAGCTCATCAAGGTTGTCTCTAACAGGGACCCTCTCCA
GCTCCCTTGGGCTGAGCTCGGAATTGACATCGTTATTGAAGGGACAGGAG
TTTTTGTGGACGGGCCTGGTGCTGGAAAGCACATCCAGCTGGTGCCANAA
AGTTATTATCACTGCTCCAGCCAAAGGTGCAGACTTTCAACCTATGTCGT
TGGATTTACGAGAAAGAGTAGAACCCAAGGGTGCAACCTTGGGAGGTCAA
TGTATCGGGCCTTGTAATGAAATGGGCACTCTTTCCCGTGCATTAGCTTG
TTAACGAGTTGGGGTCGCGGCAAGGGTCT
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