EY736436

Overview
NameEY736436
Unique NameEY736436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P1_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Trichoderma koningii GN=gpd1 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 7.404e-16
Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 2
Query:  356 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            KV INGFGRIGR  LR  +  +   ++VV +ND     + A ++ KYDS  G FK D+K VD + + +DGK IK    RDP  +PW + G + ++E TGVF     A  H +
Sbjct:    4 KVGINGFGRIGRVVLR--NALETGAVEVVALNDPFIEPHYAEYMFKYDSTHGRFKGDIK-VDGKDLVIDGKRIKFYQERDPANIPWKDSGAEYIVESTGVFTTTEKASAHFK 112          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            +KV INGFGRIGR   R  +  +   +++V VND     K A+++LKYDS  G FK D++   +  ++V+ K I     RDP  +PW + G+D V+E TGVF     A  H+
Sbjct:    3 VKVGINGFGRIGRIVFR--NAVEHDDVEIVAVNDPFIETKYAAYMLKYDSTHGQFKGDIQHSSSNNLTVNNKTIHFYQERDPANIPWGKHGVDYVVESTGVFTTTEKAKAHL 112          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            +++AINGFGRIGR  LR    RK+  ++VV +ND    V  A+++ KYDS  G F  +V   D + + +DGK + V   RDP  LPW    IDI I+ TG+F +   A KHI
Sbjct:    2 VRIAINGFGRIGRLVLRIALSRKN--IEVVAINDPFITVDYAAYMFKYDSTHGRFDGEVSH-DGKALIIDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHI 110          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: E4PD_SHESR (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain MR-7) GN=epd PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16
Identity = 44/112 (39.29%), Postives = 67/112 (59.82%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRC-WHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            ++VAING+GRIGR+ LR  +   K   + +V +N+    +   HL +YD+  G F+  VK+VD++ +  D  +IK++   DP +LPW E+ IDIV E TG  +D      HI
Sbjct:    2 IRVAINGYGRIGRSILRALYESGKRQQIQIVAINELAKPEAIVHLTQYDTTHGRFQPRVKLVDDQMLIGDD-VIKILHEPDPAKLPWREMDIDIVYEATGAILDRNSCEAHI 112          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: E4PD_SHESA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=epd PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16
Identity = 44/112 (39.29%), Postives = 67/112 (59.82%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRC-WHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            ++VAING+GRIGR+ LR  +   K   + +V +N+    +   HL +YD+  G F+  VK+VD++ +  D  +IK++   DP +LPW E+ IDIV E TG  +D      HI
Sbjct:    2 IRVAINGYGRIGRSILRALYESGKRQQIQIVAINELAKPEAIIHLTQYDTTHGRFQPRVKLVDDQMLIGDD-VIKILHEPDPAKLPWREMDIDIVYEATGAILDRNSCEAHI 112          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +KV INGFGRIGR  LR  +  +   ++VV VND    ++  +++ KYDS+ G FK  V+ V N +  VDG+ +KV + RDP  +PW  +G D V+E TGVF     A  H++
Sbjct:    2 VKVGINGFGRIGRIVLR--NALQFQDIEVVAVNDPFIDLEYMAYMFKYDSVHGRFKGTVE-VKNGSFVVDGRPMKVFAERDPAAIPWGSVGADYVVESTGVFTTIDKASAHLK 111          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: E4PD_SHESM (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain MR-4) GN=epd PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 44/112 (39.29%), Postives = 67/112 (59.82%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRC-WHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            ++VAING+GRIGR+ LR  +   K   + +V +N+    +   HL +YD+  G F+  VK+VD++ +  D  +IK++   DP +LPW E+ IDIV E TG  +D      HI
Sbjct:    2 IRVAINGYGRIGRSILRALYESGKRQQIQIVAINELAKPEAIVHLTQYDTTHGRFQPRVKLVDDQMLIGDD-VIKILHEPDPAKLPWHEMDIDIVYEATGAILDRNSCEAHI 112          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.649e-15
Identity = 45/113 (39.82%), Postives = 71/113 (62.83%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +KV INGFGRIGR   R  +  + + +++V VND     + A+++LKYDS  G FK D+K+  N+ ++++GK I+  + +DP  +PW+E G   V+E TGVF     A  H++
Sbjct:    3 VKVGINGFGRIGRIVFR--NAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSQHGQFKGDIKVEGND-LTINGKTIRFYTEKDPANIPWSETGAYYVVESTGVFTTTDKAKAHLK 112          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: G3P_BACFR (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacteroides fragilis GN=gap PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.649e-15
Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 688
            +KV INGFGRIGR   R       + + +V +ND    +  +++LKYDS+ G F+ +V + D   I V+G  I++ +  DP  L W E+  D+V+E TG F+    A KHIQ
Sbjct:    2 IKVGINGFGRIGRMVFRAAVKNFGNDIQIVGINDLLDAEYLAYMLKYDSVHGRFEGEVAVEDGALI-VNGNKIRLTAEMDPANLKWNEVDADVVVESTGFFLTDETARKHIQ 112          
BLAST of EY736436 vs. ExPASy Swiss-Prot
Match: E4PD_SHESW (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=epd PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.649e-15
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 2
Query:  353 LKVAINGFGRIGRNFLRC-WHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHI 685
            ++VAING+GRIGR+ LR  +   K   + +V +N+    +   HL +YD+  G F+  VK+VDN  +  D   IK++   D  +LPW E+ IDIV E TGV +D      HI
Sbjct:    2 IRVAINGYGRIGRSILRALYESGKRQQIQIVAINELAKPEAIIHLTQYDTTHGRFQHKVKLVDNHMLIGDDA-IKILHEPDAAKLPWREMDIDIVYEATGVILDRQSCEAHI 112          
The following BLAST results are available for this feature:
BLAST of EY736436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
G3P1_TRIKO7.404e-1641.96Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Tric... [more]
G3P_PARBA9.670e-1640.18Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P3_KLUMA9.670e-1643.75Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
E4PD_SHESR9.670e-1639.29D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SHESA9.670e-1639.29D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
G3P2_AGABI1.263e-1542.48Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agar... [more]
E4PD_SHESM1.263e-1539.29D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
G3P_PHANO1.649e-1539.82Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P_BACFR1.649e-1539.29Glyceraldehyde-3-phosphate dehydrogenase OS=Bacter... [more]
E4PD_SHESW1.649e-1540.18D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-C10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736436 ID=EY736436; Name=EY736436; organism=Citrus sinensis; type=EST; length=879bp
CACGCGTCCGCTGAATTTAACCGCATAAATAGCTAGGAGAACTTAGTCTC
TCAGCTTTAGAAGTTGCAGCAAATCAGCAACTAAGCCACAGGCCATGGCC
AGTCACTCAGCTCTTGCTCCCTCAAGAATCCCGGCCATCACTAGGATTCC
ATCCAAGACTACTCACTCTTTTCCCACTCAATGCTCCACCAAGAGGCTGG
ATGTGGCTGAATTCGCTGGCCTTCGAGCAAATGCAGGCGCGACATACGCC
ACTGGTGCTAGAGATGCATCCTTCTTTGATGCTGTGACTGCTCAACTTAC
TCCTAAGGTTGCAGCAGGATCAGTTCCTGTAAAGAAAGAAACCGTGGCCA
AATTGAAGGTGGCAATTAATGGATTTGGACGTATTGGCAGGAACTTCCTC
CGATGCTGGCACGGCAGGAAAGACTCACCCCTTGATGTTGTTGTTGTCAA
TGACAGTGGTGGTGTCAAGAATGCTTCACACCTTCTAAAATATGACTCAT
TGCTTGGAACTTTTAAAGCAGACGTGAAAATAGTGGACAACGAGACCATC
TCTGTCGATGGTAAGCTCATCAAGGTTGTCTCTAACAGGGACCCTCTCCA
GCTCCCTTGGGCTGAGCTCGGAATTGACATCGTTATTGAAGGGACAGGAG
TTTTTGTGGACGGGCCTGGTGCTGGAAAGCACATCCAGCTGGTGCCANAA
AGTTATTATCACTGCTCCAGCCAAAGGTGCAGACTTTCAACCTATGTCGT
TGGATTTACGAGAAAGAGTAGAACCCAAGGGTGCAACCTTGGGAGGTCAA
TGTATCGGGCCTTGTAATGAAATGGGCACTCTTTCCCGTGCATTAGCTTG
TTAACGAGTTGGGGTCGCGGCAAGGGTCT
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