EY736435

Overview
NameEY736435
Unique NameEY736435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736435 vs. ExPASy Swiss-Prot
Match: GLT1_YEAST (Glutamate synthase [NADH] OS=Saccharomyces cerevisiae GN=GLT1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.584e-19
Identity = 60/195 (30.77%), Postives = 100/195 (51.28%), Query Frame = 1
Query:   82 NAFLYNVV*VRGMLAQLGYAKLDDVIGRTDLFRPRDISLVKTQHLDLSYILSNV-----GLPKWSSTEIRNQDVHTNGPVLDEVLLADAEISDAIEYEKVVHKTCKIYNVDRAVCGRIXGVIAXKYGNTGFAGQLNITFI-GSAGXSFACFLTPXMNIHLIGKANDYVGXGMAGXEVVXTPVXTTGFCPXEXTIL 648
            N F Y +  +R ++A+LG+  +D+++G ++  + RD    K  ++DLS IL+       G+P    T+ ++  +HT    LD  L+ +AE++  ++    V+    I N DRA+   +   ++ K+G  G      +  I GSAG SF  FL   +   L G ANDYVG G++G  +V  P   + F   E  I+
Sbjct: 1220 NFFYYLIQDLRQIMAKLGFRTIDEMVGHSEKLKKRDDVNAKAINIDLSPILTPAHVIRPGVPT-KFTKKQDHKLHTR---LDNKLIDEAEVT--LDRGLPVNIDASIINTDRALGSTLSYRVSKKFGEDGLPKDTVVVNIEGSAGQSFGAFLASGITFILNGDANDYVGKGLSGGIIVIKPPKDSKFKSDENVIV 1408          

HSP 2 Score: 34.6538 bits (78), Expect = 1.584e-19
Identity = 14/28 (50.00%), Postives = 17/28 (60.71%), Query Frame = 2
Query:  650 GNTCFYGPTCGPIFVTTKPPHTFAVKNS 733
            GNTCFYG T G  F++      F V+NS
Sbjct: 1409 GNTCFYGATSGTAFISGSAGERFGVRNS 1436          
BLAST of EY736435 vs. ExPASy Swiss-Prot
Match: GLTB_ECOLI (Glutamate synthase [NADPH] large chain OS=Escherichia coli (strain K12) GN=gltB PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.335e-17
Identity = 62/199 (31.16%), Postives = 94/199 (47.24%), Query Frame = 1
Query:   55 NGITFTVFFNAFLYNVV*VRGMLAQLGYAKLDDVIGRTDLFRPRDISLVKTQHLDLSYILSNVGLPKWSSTEIRNQDVHTNGPVLDEVLLADAEISDAIEYEKVVHKTCKIYNVDRAVCGRIXGVIAXKYGNTGFAGQ-LNITFIGSAGXSFACFLTPXMNIHLIGKANDYVGXGMAGXEVVXTPVXTTGFCPXEXTIL 648
            +G+ F V  N F +     R ++AQLG  +L D+IGRTDL +  D    K Q L LS +L         +      +   +  +L+  LL  A+    ++  +       I N DR+V   + G IA  +G+ G A   +   F G+AG SF  +    + ++L G ANDYVG GMAG  +   P   + F   E +I+
Sbjct: 1161 HGLPFKVT-NYFEFIARETRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTENNPPFDNGLLNAQLLQQAK--PFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLAADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSHEASII 1356          

HSP 2 Score: 30.4166 bits (67), Expect = 2.335e-17
Identity = 12/28 (42.86%), Postives = 16/28 (57.14%), Query Frame = 2
Query:  650 GNTCFYGPTCGPIFVTTKPPHTFAVKNS 733
            GNTC YG T G ++   +    F V+NS
Sbjct: 1357 GNTCLYGATGGRLYAAGRAGERFGVRNS 1384          
BLAST of EY736435 vs. ExPASy Swiss-Prot
Match: GLTB_AZOBR (Glutamate synthase [NADPH] large chain OS=Azospirillum brasilense GN=gltB PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.472e-16
Identity = 58/198 (29.29%), Postives = 93/198 (46.97%), Query Frame = 1
Query:   82 NAFLYNVV*VRGMLAQLGYAKLDDVIGRTDLFRPRDISLVKTQHLDLSYILSNVGL---PKWSSTEIRNQDVHTNGPVLDEVLLADAEISDAIEYEKVVHKTCKIYNVDRAVCGRIXGVIAXKYGNTGFA-GQLNITFIGSAGXSFACFLTPXMNIHLIGKANDYVGXGMAGXEVVXTPVXTTGFCPXEXTILXEYLL 663
            N F +    VR +LA LG+  L++VIGRTDL             LDL+  L+ V      ++ + + RN+   T    LD  ++ADA      E  + +       N  RA+  R+  ++  K+G  G   G + I   G+AG S   F    + + ++G ANDYVG G++G  +V  P  ++     + TI+   +L
Sbjct: 1173 NLFTFLAEEVREILAGLGFRSLNEVIGRTDLLHQVSRGAEHLDDLDLNPRLAQVDPGENARYCTLQGRNEVPDT----LDARIVADAR--PLFEEGEKMQLAYNARNTQRAIGTRLSSMVTRKFGMFGLQPGHITIRLRGTAGQSLGAFAVQGIKLEVMGDANDYVGKGLSGGTIVVRPTTSSPLETNKNTIIGNTVL 1364          

HSP 2 Score: 30.4166 bits (67), Expect = 2.472e-16
Identity = 13/28 (46.43%), Postives = 16/28 (57.14%), Query Frame = 2
Query:  650 GNTCFYGPTCGPIFVTTKPPHTFAVKNS 733
            GNT  YG T G +F   +    FAV+NS
Sbjct: 1360 GNTVLYGATAGKLFAAGQAGERFAVRNS 1387          
BLAST of EY736435 vs. ExPASy Swiss-Prot
Match: GLTA_BACSU (Glutamate synthase [NADPH] large chain OS=Bacillus subtilis GN=gltA PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.611e-15
Identity = 58/176 (32.95%), Postives = 89/176 (50.57%), Query Frame = 1
Query:   82 NAFLYNVV*VRGMLAQLGYAKLDDVIGRTDLFRPRDISLV--KTQHLDLSYILSNVGLPKWSSTEIRNQDVHTNGPVLDEVLLADAEISDAIEYEKVVHKTCKIYNVDRAVCGRIXGV-IAXKYGNTGFAGQ-LNITFIGSAGXSFACFLTPXMNIHLIGKANDYVGXGMAGXEVV 597
            N  L+    VR  +A LG+   D++IGRTD+    + +    K   LDLS +L     P+   T  ++   H     LD   +  A + +AIE  K    + +I N +R V G I G  I+ +YG  G     + + F GSAG SF  F+   M ++L G +NDYVG G++G +++
Sbjct: 1148 NYMLFIAEEVREYMAALGFKTFDEMIGRTDVLHASERAKEHWKASQLDLSTLLYQ---PEGVRT-FQSPQNHKIDQSLDITTILPA-VQEAIESGKEADISIEINNTNR-VAGTITGSEISKRYGEEGLPEDTIKLHFTGSAGQSFGAFVPKGMTLYLDGDSNDYVGKGLSGGKII 1317          

HSP 2 Score: 30.0314 bits (66), Expect = 2.611e-15
Identity = 12/28 (42.86%), Postives = 16/28 (57.14%), Query Frame = 2
Query:  650 GNTCFYGPTCGPIFVTTKPPHTFAVKNS 733
            GN  FYG T G  ++  +    FAV+NS
Sbjct: 1335 GNVAFYGATSGEAYINGRAGERFAVRNS 1362          
BLAST of EY736435 vs. ExPASy Swiss-Prot
Match: GLTB_SYNY3 (Ferredoxin-dependent glutamate synthase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gltB PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.391e-15
Identity = 52/180 (28.89%), Postives = 87/180 (48.33%), Query Frame = 1
Query:  109 VRGMLAQLGYAKLDDVIGRTDLFRPRD-ISLVKTQHLDLSYILSNVGLPKWSSTEIRNQDVHTNGPVLDEVLLADAEISDAIEYEKVVHKTCKIYNVDRAVCGRIXGVIAXKYGNTGFAGQLNITFIGSAGXSFACFLTPXMNIHLIGKANDYVGXGMAGXEVVXTPVXTTGFCPXEXTI 645
            +R ++AQLG+  +++++GRTD+  P+  ++  K + +DLS IL    +        +    H     LD   L D     AI   + V  T  I N++R V   +   I  ++        +++ F GSAG SF  F+   M + L G ANDY+G G++G +++  P   + F   E  I
Sbjct: 1194 LREVMAQLGFRTINEMVGRTDILEPKKAVAHWKAKGIDLSTILHQPEVGDDVGRYCQIPQDHGLQHSLDITQLLDL-CQPAIAKGEKVTATLPITNINRVVGTIVGNEITKRHWEGLPEDTVHLHFQGSAGQSFGAFIPKGMTLELEGDANDYLGKGLSGGKIIVYPPKGSSFIASENII 1372          

HSP 2 Score: 30.4166 bits (67), Expect = 3.391e-15
Identity = 11/28 (39.29%), Postives = 16/28 (57.14%), Query Frame = 2
Query:  650 GNTCFYGPTCGPIFVTTKPPHTFAVKNS 733
            GN C YG T G ++++      F V+NS
Sbjct: 1374 GNVCLYGATAGEVYISGMVGERFCVRNS 1401          
BLAST of EY736435 vs. ExPASy Swiss-Prot
Match: GLSN_MEDSA (Glutamate synthase [NADH], amyloplastic OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.591e-15
Identity = 57/192 (29.69%), Postives = 100/192 (52.08%), Query Frame = 1
Query:  109 VRGMLAQLGYAKLDDVIGRTDLFRPRDISLVK----TQHLDLSYILSNVG--LPKWSSTEIRNQDVHTNGPVLDEVLLADAEISDAIEYEKVVHKTCKIYNVDRAVCGRIXGVIAXKYGNTGF-AGQLNITFIGSAGXSFACFLTPXMNIHLIGKANDYVGXGMAGXEVVXTPVXTTGFCPXEXTILXEYLL 663
            +R +++QLG+  +++++GR+D+    D  +VK     +++DLS +L       P+ +   ++ QD H     LD  L++ +    A+E    V+    I N +RAV   +   +  +Y   G  A  ++I F GSAG SF  FL P + + L G +NDY+G G++G +VV  P   + F P +  ++    L
Sbjct: 1290 MREIMSQLGFRTVNEMVGRSDMLEV-DKEVVKGNAKLENIDLSLLLRPAAELRPEAAQYCVQKQD-HGLDMALDNKLISLSNA--ALEKGLPVYIETPICNTNRAVGTMLSHEVTKRYNLAGLPADTIHIQFTGSAGQSFGAFLCPGITLELEGDSNDYIGKGLSGGKVVVYPPKGSNFDPKDNILIGNVAL 1477          

HSP 2 Score: 23.0978 bits (48), Expect = 9.591e-15
Identity = 10/28 (35.71%), Postives = 12/28 (42.86%), Query Frame = 2
Query:  650 GNTCFYGPTCGPIFVTTKPPHTFAVKNS 733
            GN   YG T G  +        F V+NS
Sbjct: 1473 GNVALYGATRGEAYFNGMAAERFCVRNS 1500          
The following BLAST results are available for this feature:
BLAST of EY736435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GLT1_YEAST1.584e-1930.77Glutamate synthase [NADH] OS=Saccharomyces cerevis... [more]
GLTB_ECOLI2.335e-1731.16Glutamate synthase [NADPH] large chain OS=Escheric... [more]
GLTB_AZOBR2.472e-1629.29Glutamate synthase [NADPH] large chain OS=Azospiri... [more]
GLTA_BACSU2.611e-1532.95Glutamate synthase [NADPH] large chain OS=Bacillus... [more]
GLTB_SYNY33.391e-1528.89Ferredoxin-dependent glutamate synthase 1 OS=Synec... [more]
GLSN_MEDSA9.591e-1529.69Glutamate synthase [NADH], amyloplastic OS=Medicag... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-C09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736435 ID=EY736435; Name=EY736435; organism=Citrus sinensis; type=EST; length=909bp
CGTCGCCTGAGAGGTACNGGTCCGGAATCCCTAGGTCGACCACGCGTCCG
ATAAAATGGCATCACCTTCACTGTATTCTTCAATGCTTTTCTGTACAATG
TTGTTTAGGTTAGAGGCATGTTGGCACAACTGGGTTATGCGAAGTTGGAT
GATGTAATTGGAAGAACAGATTTGTTCAGGCCGCGGGACATCTCACTAGT
GAAAACTCAGCATCTTGATCTCAGTTATATTCTCTCAAATGTTGGATTGC
CAAAATGGAGCAGTACGGAAATAAGGAATCAGGATGTTCATACGAATGGG
CCTGTACTGGATGAGGTTTTGCTTGCAGATGCTGAGATATCTGATGCAAT
TGAGTATGAGAAAGTGGTTCACAAAACCTGTAAGATATACAATGTGGACC
GAGCTGTTTGTGGGCGTATANCGGGTGTGATCGCGAANAAATATGGAAAC
ACTGGTTTTGCTGGGCAGCTAAACATAACATTTATTGGGAGTGCTGGGCA
NTCATTTGCGTGCTTTTTGACACCTGNGATGAACATTCACCTGATTGGAA
AGGCCAATGATTATGTGGGANAGGGAATGGCTGGANGTGAGGTTGTANTG
ACTCCTGTTNAAACCACTGGATTTTGCCCTNACGAANCCACAATACTTNG
GGAATACCTGCTTTTATGGACCAACTTGTGGTCCAATCTTTGTTACAACA
AAACCCCCACACACGTTTGCCGTNAAAAACTCCCTTTCTCCACCCCNTCT
TCAAAGGCACTGGAAAATCCTCCTCCTAACTACCTAACTNNTTCCTTGTC
TCCTTGTCCTTGGCAACCTGGGTTCCACTCTTCCTCCTGCAATAACTGNA
NGTTTCGGCTAGATTCCCCCCTCCCCACAATACCCCCATCCCCCCGTCCG
TGGGGGAGG
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