EY736420

Overview
NameEY736420
Unique NameEY736420
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_TROWH (60 kDa chaperonin OS=Tropheryma whipplei GN=groL PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.325e-57
Identity = 111/221 (50.23%), Postives = 152/221 (68.78%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG +IA A++KVG +GV+                GM  D+GY+S  FVT+ E+    FEN  +L+ D KIS++KD++P+++K  Q    LLIIAEDV GEALATLVVNK+RGI    A+KAPGFG+RRK +LQDIA++TG +  + ++GL +EN +++ LG ARKV + KD TTI+  A S D+I  R++Q++KEL  +DS YD  KL ER+AKLSGG
Sbjct:  153 DPQIGDIIAQALEKVGKEGVVTVEESNTFGTELEITEGMRFDKGYLSAYFVTDAERQETVFENPYILICDSKISSVKDLLPVVDKVIQSGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKMMLQDIAVLTGGQVISEEVGLKLENATLDLLGRARKVVVSKDETTIVDGAGSSDQIAGRVSQIRKELENSDSDYDREKLQERLAKLSGG 373          

HSP 2 Score: 25.409 bits (54), Expect = 1.325e-57
Identity = 13/26 (50.00%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            E EL +RK R EDA     A +E GI
Sbjct:  384 EVELKERKHRIEDAVRNAKAAVEEGI 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_TROW8 (60 kDa chaperonin OS=Tropheryma whipplei (strain TW08/27) GN=groL PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.325e-57
Identity = 111/221 (50.23%), Postives = 152/221 (68.78%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG +IA A++KVG +GV+                GM  D+GY+S  FVT+ E+    FEN  +L+ D KIS++KD++P+++K  Q    LLIIAEDV GEALATLVVNK+RGI    A+KAPGFG+RRK +LQDIA++TG +  + ++GL +EN +++ LG ARKV + KD TTI+  A S D+I  R++Q++KEL  +DS YD  KL ER+AKLSGG
Sbjct:  153 DPQIGDIIAQALEKVGKEGVVTVEESNTFGTELEITEGMRFDKGYLSAYFVTDAERQETVFENPYILICDSKISSVKDLLPVVDKVIQSGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKMMLQDIAVLTGGQVISEEVGLKLENATLDLLGCARKVVVSKDETTIVDGAGSSDQIAGRVSQIRKELENSDSDYDREKLQERLAKLSGG 373          

HSP 2 Score: 25.409 bits (54), Expect = 1.325e-57
Identity = 13/26 (50.00%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            E EL +RK R EDA     A +E GI
Sbjct:  384 EVELKERKHRIEDAVRNAKAAVEEGI 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_LEIXX (60 kDa chaperonin OS=Leifsonia xyli subsp. xyli GN=groL PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.325e-57
Identity = 111/221 (50.23%), Postives = 154/221 (69.68%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG +IA+AIDKVG +GV+                GM  D+G++S  FVT+ ++    FE+A +L+ +QKIS+IKD++P+++K  Q    LLIIAEDV GEALATL+VNK+RGI    A+KAPGFG+RRKA+LQDIAI+TG +  + ++GL +EN +++ LG ARKV I KD TTI+  A   D+I  R+AQ++ E+  +DS YD  KL ER+AKL+GG
Sbjct:  153 DTTIGDIIAEAIDKVGKEGVVTVEESNTFGTELELTEGMRFDKGFLSQYFVTDQDRQEAVFEDAYILIANQKISSIKDLLPIVDKVIQANKQLLIIAEDVDGEALATLIVNKIRGIFKSVAVKAPGFGDRRKAMLQDIAILTGGQVISEEVGLKLENVTLDLLGKARKVVITKDETTIVEGAGDPDQIAGRVAQIRGEIDNSDSDYDREKLQERLAKLAGG 373          

HSP 2 Score: 25.409 bits (54), Expect = 1.325e-57
Identity = 13/26 (50.00%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            E EL +RK R EDA     A +E GI
Sbjct:  384 EVELKERKHRIEDAVRNAKAAVEEGI 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.325e-57
Identity = 108/218 (49.54%), Postives = 151/218 (69.27%), Query Frame = 2
Query:   32 IGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            IG +IA+A++KVG DGV+                GM+ DRGYISP FVT+PEK+ V +    +L+TD+K+S IK +IP+LEK  Q   PL+IIAEDV GEAL TLV+NKL+G LN  A+KAPGFG+RRKA+LQDIAI+TG    + ++G+ +E+ ++  LG A  V ++KD T I+     ++EI+ RIAQ+K ++ +T S Y+   L ER+AKL+GG
Sbjct:  156 IGKLIAEAMEKVGEDGVITVEDSKSIDTFVEFTEGMQFDRGYISPYFVTDPEKMEVVYNEPFILITDRKLSNIKPLIPILEKVAQTGKPLVIIAEDVEGEALTTLVLNKLKGTLNTVAVKAPGFGDRRKAMLQDIAILTGGIVASEEVGINLEDLTLNDLGRADVVRVKKDETIIVGGHGDQEEIKKRIAQIKAQIEQTTSEYEKETLQERMAKLAGG 373          

HSP 2 Score: 30.8018 bits (68), Expect = 1.325e-57
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            ETEL ++K R EDA +AT A +E GI
Sbjct:  384 ETELKEKKHRIEDALSATRAAVEEGI 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_RICRI (60 kDa chaperonin (Fragment) OS=Rickettsia rickettsii GN=groL PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.329e-57
Identity = 113/221 (51.13%), Postives = 154/221 (69.68%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG  IA A+++VG +GV+                GM  DRGY+SP FVTN EK++ E EN  +L+ ++K+S ++ ++P+LE   Q + PLLIIAEDV GEALATLVVN+LRG L VAA+KAPGFG+RRKA+++DIAI+T  E    DLG+ +EN S++ LGTA++VTI K++T I+     K  I+ R+ Q+K ++AET S YD  KL ER+AKLSGG
Sbjct:  155 DKEIGEKIAKAMEEVGKEGVITVEEAKNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENPFILLFEKKLSNLQPMLPILEAVVQSQRPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMMEDIAILTKGELITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDYDKEKLQERLAKLSGG 375          

HSP 2 Score: 23.8682 bits (50), Expect = 1.329e-57
Identity = 12/23 (52.17%), Postives = 15/23 (65.22%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIE 785
            E E+ +RK R EDA  AT A +E
Sbjct:  386 EVEVKERKDRVEDALAATRAAVE 408          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_SHEAM (60 kDa chaperonin OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=groL PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.491e-57
Identity = 113/221 (51.13%), Postives = 158/221 (71.49%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ IG +IA A++KVG +GV+                GM+ DRGY+SP F+  PE   VE +N  VL+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIAI+TG    A ++GL +E  ++E LGTA++V I KD+TTII    ++++I+AR+ Q+K+++ ET S YD  KL ER+AKL+GG
Sbjct:  155 DESIGDIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGAVELDNPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGAEEQIKARVGQIKQQIEETTSDYDREKLQERMAKLAGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_PROA2 (60 kDa chaperonin OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=groL PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.491e-57
Identity = 112/221 (50.68%), Postives = 155/221 (70.14%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG +IA+A+DKVG DGV+                GM+ DRGY+SP FVTN EK+  + E+  +L+ D+KIS +K+++P+LEKT Q   PL+IIAED+ GEALATLVVNKLRG L V A+KAPGFG+RRKA+L+DIAI+TG    + + G  +EN ++  LG A  +T+ KD+TTI+      D+I+ARI ++K ++ ++ S YD+ KL ER+AKLSGG
Sbjct:  155 DPEIGELIAEAMDKVGKDGVITVEEAKGMDTELTVVEGMQFDRGYLSPYFVTNSEKMDADLEDPYILIYDKKISNMKELLPVLEKTAQSGRPLMIIAEDIEGEALATLVVNKLRGTLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEEKGYKLENATISYLGQAASITVDKDNTTIVDGKGQADDIKARIGEIKGQIEKSTSDYDTEKLQERLAKLSGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_GRAFK (60 kDa chaperonin OS=Gramella forsetii (strain KT0803) GN=groL PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.491e-57
Identity = 113/221 (51.13%), Postives = 152/221 (68.78%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            DD+IG +IA A  KVG +GV+                GM+ DRGY+SP FVTN EK+  + E+  +L+ D+KIS++KD++P+LE   Q   PLLIIAEDV GEALATLVVNKLRG L +AA+KAPGFG+RRKA+L+DIAI+TG    + + G  +EN +++ LGTA KV I KD+TT++  A     I+ R+ Q+K ++  T S YD  KL ER+AKL+GG
Sbjct:  155 DDMIGDLIAQAFGKVGKEGVITVEEAKGTETHVDVVEGMQFDRGYLSPYFVTNSEKMTADLEDPYILLFDKKISSMKDLLPVLEPVAQSGKPLLIIAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGFSLENATIDMLGTAEKVAIDKDNTTVVNGAGDDKAIKERVNQIKAQIESTTSDYDREKLQERLAKLAGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_CHLTE (60 kDa chaperonin OS=Chlorobium tepidum GN=groL PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.491e-57
Identity = 114/221 (51.58%), Postives = 156/221 (70.59%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG +IA+A+DKVG DGV+                GM+ DRGY+SP FVTN E +  E + A +L+ D+KIS +K+++P+LEK  Q   PLLIIAED+ GEALATLVVNKLRG L VAA+KAPGFG+RRKA+L+DIAI+TG    + + G  +EN ++  LG A ++TI KD+TTI+     ++EI+ARI ++K ++ ++ S YD+ KL ER+AKLSGG
Sbjct:  155 DPEIGELIAEAMDKVGKDGVITVEEAKGMETELKVVEGMQFDRGYLSPYFVTNSETMEAELDEALILIHDKKISNMKELLPILEKAAQSGRPLLIIAEDIEGEALATLVVNKLRGTLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEEKGYKLENATMAYLGQAARITIDKDNTTIVEGKGKQEEIKARINEIKGQIEKSTSDYDTEKLQERLAKLSGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_BUCMP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Myzus persicae GN=groL PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.491e-57
Identity = 111/221 (50.23%), Postives = 156/221 (70.59%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ +G +IA+A++KVG DGV+                GM+ DRGY+SP F+  PE  IVE EN  +LV D+KIS +++++P+LE   +   PLLII+ED+ GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDI+I+TG    + +L + +E +++E LG A++V I KD+TTII     K  IQ+RI+Q+++E+ E  S YD  KL ER+AKLSGG
Sbjct:  155 DEKVGALIAEAMEKVGNDGVITVEEGTGLQNELEVVKGMQFDRGYLSPYFINKPETGIVELENPYILVADKKISNVREMLPILESVAKSGKPLLIISEDLEGEALATLVVNSMRGIVKVAAVKAPGFGDRRKAMLQDISILTGGSVISEELAMELEKSTLEDLGQAKRVVISKDTTTIIGGVGEKHTIQSRISQIRQEIQEATSDYDKEKLNERLAKLSGG 375          
The following BLAST results are available for this feature:
BLAST of EY736420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_TROWH1.325e-5750.2360 kDa chaperonin OS=Tropheryma whipplei GN=groL P... [more]
CH60_TROW81.325e-5750.2360 kDa chaperonin OS=Tropheryma whipplei (strain T... [more]
CH60_LEIXX1.325e-5750.2360 kDa chaperonin OS=Leifsonia xyli subsp. xyli GN... [more]
CH60_THEM41.325e-5749.5460 kDa chaperonin OS=Thermosipho melanesiensis (st... [more]
CH60_RICRI1.329e-5751.1360 kDa chaperonin (Fragment) OS=Rickettsia rickett... [more]
CH60_SHEAM1.491e-5751.1360 kDa chaperonin OS=Shewanella amazonensis (strai... [more]
CH60_PROA21.491e-5750.6860 kDa chaperonin OS=Prosthecochloris aestuarii (s... [more]
CH60_GRAFK1.491e-5751.1360 kDa chaperonin OS=Gramella forsetii (strain KT0... [more]
CH60_CHLTE1.491e-5751.5860 kDa chaperonin OS=Chlorobium tepidum GN=groL PE... [more]
CH60_BUCMP1.491e-5750.2360 kDa chaperonin OS=Buchnera aphidicola subsp. My... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-B04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736420 ID=EY736420; Name=EY736420; organism=Citrus sinensis; type=EST; length=796bp
CACGCGTCCGCCCACGCGTCCGGATGACCTGATTGGGACAATGATCGCCG
ATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCATCA
TCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGACAG
GGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTGTTG
AATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCAATA
AAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACCATT
GCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAGTCG
TCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCTGGT
TTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGACTGG
AGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAG
TTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACT
ACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGC
ACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTNTATGACTCANAGA
AACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGGTTGCTGTTATCTA
AGTTGGAGCTGCCCCAGAAACTGAGCTTGATGACCGTAAACTCCGTTTTG
AAGATGCCAAGAATGCGACTTTTGCCCCCATAGAAGGAGGGATTGT
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