EY736420

Overview
NameEY736420
Unique NameEY736420
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_MAGSM (60 kDa chaperonin OS=Magnetococcus sp. (strain MC-1) GN=groL PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 2.252e-57
Identity = 107/221 (48.42%), Postives = 154/221 (69.68%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D ++G MIA+A+DKVG +GV+                GM+ DRGY+SP FVTN +K++V+ EN  +L+ ++KIS ++ I+ +LE   Q   PL+IIAEDV GEALATLVVNKLRG L V A+KAPGFG+RRKA+++DIA +TG    + D+G+ +EN +++ LG A+ + + K+ TTII  A   + I+AR+ Q++ ++ ET S YD  KL ER+AKL+GG
Sbjct:  155 DKVVGDMIAEAMDKVGKEGVITVEEAKGLETTLDVVEGMQFDRGYLSPYFVTNADKMLVQMENPLILLVEKKISNLQQILQILEGAVQSSRPLMIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMMEDIATLTGGVLVSEDVGVKLENVTMDMLGMAKSIVVTKEDTTIIDGAGDHEAIKARVNQIRAQIEETSSDYDREKLQERLAKLAGG 375          

HSP 2 Score: 26.9498 bits (58), Expect = 2.252e-57
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            E E+ +RK R +DA +AT A +E GI
Sbjct:  386 EVEVKERKDRVDDALHATRAAVEEGI 411          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_CLOPH (60 kDa chaperonin OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=groL PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.253e-57
Identity = 106/221 (47.96%), Postives = 153/221 (69.23%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            DD +G M+ADA+DKV  DGV+                GM+ DRGY+S    T+ +K+    +N  +L+TD+KIS I++I+P+LE+  Q  + LLIIAED+ GEAL TLV+NKLRG   V  +KAPG+G+RRKA+LQDIAI+TG    + +LGL ++  +++QLG A+ V I+K++T I+    +K EI+ARI+Q+K ++AET S +D  KL ER+AKL+GG
Sbjct:  153 DDSVGEMVADAMDKVSKDGVITIEESKTMQTELDLVEGMQFDRGYVSAYMATDMDKMEANLDNPYILITDKKISNIQEILPVLEQIVQSGSRLLIIAEDIEGEALTTLVINKLRGTFTVVGVKAPGYGDRRKAMLQDIAILTGGTVISDELGLDLKEATLDQLGRAKSVKIQKENTIIVDGEGNKAEIEARISQIKAQIAETTSEFDKEKLQERLAKLAGG 373          

HSP 2 Score: 31.5722 bits (70), Expect = 2.253e-57
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            ETE+ ++KLR EDA  AT A +E GI
Sbjct:  384 ETEMKEKKLRMEDALAATRAAVEEGI 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_SHEWM (60 kDa chaperonin OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=groL PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.543e-57
Identity = 113/221 (51.13%), Postives = 155/221 (70.14%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ IG +IA A++KVG +GV+                GM+ DRGY+SP F+  PE   VE E+  +L+ D+K+S I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIAI+TG    A ++GL +E  ++E LGTA++V I KD TTII     +D+IQAR+AQ+K +  E+ S YD  KL ER+AKL+GG
Sbjct:  155 DETIGEIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELESPFILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGTGEQDQIQARVAQIKVQAEESTSDYDKEKLQERMAKLAGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_PSEFS (60 kDa chaperonin OS=Pseudomonas fluorescens (strain SBW25) GN=groL PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.543e-57
Identity = 109/221 (49.32%), Postives = 159/221 (71.95%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG +IA+A++KVG +GV+                GM+ DRGY+SP FV  PE ++ E ++  +L+ D+KIS I++++P+LE   +   PLLI++EDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIA++TG    + ++GL +E+ ++E LG+A++VTI K++T I+  A  + +IQARI Q++ ++AET S YD  KL ER+AKLSGG
Sbjct:  155 DSSIGDIIAEAMEKVGKEGVITVEEGTGLENELSVVEGMQFDRGYLSPYFVNKPETMVAELDSPLILLVDKKISNIREMLPVLEAVAKAGRPLLIVSEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTVISEEIGLSLESATLENLGSAKRVTISKENTIIVDGAGVEQDIQARITQIRAQVAETSSDYDREKLQERLAKLSGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_PELPB (60 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groL PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.543e-57
Identity = 112/221 (50.68%), Postives = 156/221 (70.59%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D +IG +IADA+DKVG DGV+                GM+ DRGY+SP FVTN E +  E E+  +L+ D+KIS +K+++P+LEK+ Q   PLLII+ED+ GEALAT+VVNKLRG L V A+KAPGFG+RRKA+L+DIAI+TG    + + G  +EN ++  LG A +VT+ KD+TTI+      +EI+ARI ++K ++ ++ S YD+ KL ER+AKLSGG
Sbjct:  155 DPVIGDLIADAMDKVGKDGVITVEEAKGMDTELKVVEGMQFDRGYLSPYFVTNSETMDAELEDPLILIYDKKISNMKELLPILEKSAQSGRPLLIISEDIEGEALATIVVNKLRGTLRVCAVKAPGFGDRRKAMLEDIAILTGGTVISEEKGYKLENATISYLGQAGRVTVDKDNTTIVEGKGGAEEIKARINEIKGQVEKSTSDYDTEKLQERLAKLSGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_BUCAP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=groL PE=3 SV=3)

HSP 1 Score: 222.246 bits (565), Expect = 2.543e-57
Identity = 110/221 (49.77%), Postives = 156/221 (70.59%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ +G +IA+A++KVG DGV+                GM+ DRGY+SP F+  PE  IVE EN  +L+ D+KIS +++++P+LE   +   PLLII+ED+ GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDI+I+TG    + +L + +E +++E LG A++V I KD+TTII  +  K  IQ+RI Q+++E+ E  S YD  KL ER+AKLSGG
Sbjct:  155 DEKVGALIAEAMEKVGNDGVITVEEGTGLQNELEVVKGMQFDRGYLSPYFINKPETGIVELENPYILMADKKISNVREMLPILESVAKSGKPLLIISEDLEGEALATLVVNSMRGIVKVAAVKAPGFGDRRKAMLQDISILTGGSVISEELAMDLEKSTLEDLGQAKRVVINKDTTTIIGGSGEKQAIQSRIGQIRQEIQEATSDYDKEKLNERLAKLSGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_AZOPC (60 kDa chaperonin OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=groL PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.543e-57
Identity = 112/221 (50.68%), Postives = 154/221 (69.68%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ IG++IA+A+ KV  +GV+                GM+ DRGYIS  FVTN +K+  + EN  +L+ D+KIS +KDI+P+LEKT Q   P+LIIAED+  EALATLVVN+LRG L V A+KAPGFG+RRK +L+DIA++TG    + + GL +E  +++ LGTA KVTI KD+T I+  A  K  I AR++Q+K ++ +T S YDS KL ER+AKL+GG
Sbjct:  155 DETIGSLIAEAMKKVKKEGVITIEESKGIETYVDVVEGMQFDRGYISSYFVTNTDKMEADLENPYILIHDKKISVLKDILPILEKTIQTGRPMLIIAEDIESEALATLVVNRLRGSLKVCAVKAPGFGDRRKEMLEDIAVLTGGVVISEEKGLKLEGVTIDMLGTAEKVTISKDNTVIVNGAGEKSAISARVSQIKTQIEKTTSDYDSEKLQERLAKLAGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH601_PROMP (60 kDa chaperonin 1 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.935e-57
Identity = 107/221 (48.42%), Postives = 153/221 (69.23%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ IG++I+ A+D V  DGV+                GM  DRGY SP FVT+ E+ I E EN ++L+TDQKIS + +++P+LE+  +  +P LI+AED+ GEAL TLV+NK  G+LNV+A++AP FGERRKA L+DIAI+TGA+  + D  + +E  ++  LG A+K+TI KD TTI+A   +KD +Q R+ +LK+E+  T+S YD  K+ ERIAKL+GG
Sbjct:  153 DEDIGSIISKAMDIVTSDGVITVEESQSLETELDITEGMSFDRGYSSPYFVTDQERQICELENPKILITDQKISTLTNLVPILEEVQKSASPFLILAEDIEGEALTTLVLNKNSGVLNVSAVRAPSFGERRKAALEDIAILTGAKLISEDQSMKLEEVTLNDLGKAKKITISKDKTTIVAFDDTKDLVQERVEKLKREVEITESEYDKDKINERIAKLAGG 373          

HSP 2 Score: 31.5722 bits (70), Expect = 2.935e-57
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            ETE+  +KLR ED+ NAT A IE G+
Sbjct:  384 ETEMKYKKLRIEDSLNATKAAIEEGV 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_PELUB (60 kDa chaperonin OS=Pelagibacter ubique GN=groL PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.937e-57
Identity = 108/221 (48.87%), Postives = 153/221 (69.23%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG MIA A+ KVG +GV+                GM+ DRGY+SP F+TN +K+  E EN  +L+ ++K++ ++ ++PLLE   Q   PL+II+EDV GEALATLVVNKLRG L V A+KAPGFG+RRK++L DIAI+TG +  + D+G+ +EN  +  LG+ ++V + KD++TII+    K EI+AR AQ+K+++ ET S YD  KL ER+AKL+GG
Sbjct:  154 DKEIGNMIAKAMQKVGNEGVITVEEAKGVETELDVVEGMQFDRGYLSPYFITNADKMTTELENPFILLHEKKLTNLQPMVPLLEAVVQAGRPLMIISEDVEGEALATLVVNKLRGGLKVVAVKAPGFGDRRKSMLDDIAILTGGQVISEDIGVKLENVKLTDLGSCKRVKVDKDNSTIISGNGKKSEIEARCAQIKQQVGETTSDYDREKLQERLAKLAGG 374          

HSP 2 Score: 28.4906 bits (62), Expect = 2.937e-57
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            E E+ +RK R EDA NAT A  E GI
Sbjct:  385 EVEVKERKDRVEDALNATRAAAEEGI 410          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH604_SINMW (60 kDa chaperonin 4 OS=Sinorhizobium medicae (strain WSM419) GN=groL4 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.937e-57
Identity = 109/221 (49.32%), Postives = 154/221 (69.68%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  +G MIA A++KVG +GV+                GM+ DRGY+SP FVTN EK+ VE ++  +L+ ++K+  ++ ++P+LE   Q   PLLII+EDV GEAL TLVVNKLRG L +AA+K+PGFG+RRKA+LQDIA++T  +  + D+G+ +EN +++ LG AR+V I KD+TTII  +  K  IQA I+Q+K ++ ET S YD  KL ER+AKL+GG
Sbjct:  155 DASVGEMIAGAMEKVGNEGVITVEEARTADTELDVVEGMQFDRGYLSPYFVTNAEKMRVELDDPYILIHEKKLGNLQTMLPILEAVVQSGKPLLIISEDVEGEALTTLVVNKLRGGLKIAAVKSPGFGDRRKAMLQDIAVLTAGQMISEDIGIKLENVTLDMLGRARRVLIEKDTTTIIDGSGDKASIQACISQIKAQIEETTSDYDKEKLQERLAKLTGG 375          

HSP 2 Score: 27.7202 bits (60), Expect = 2.937e-57
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            E E+ ++K R +DA NAT A +E GI
Sbjct:  386 ELEVKEKKDRIDDALNATRAAVEEGI 411          
The following BLAST results are available for this feature:
BLAST of EY736420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_MAGSM2.252e-5748.4260 kDa chaperonin OS=Magnetococcus sp. (strain MC-... [more]
CH60_CLOPH2.253e-5747.9660 kDa chaperonin OS=Clostridium phytofermentans (... [more]
CH60_SHEWM2.543e-5751.1360 kDa chaperonin OS=Shewanella woodyi (strain ATC... [more]
CH60_PSEFS2.543e-5749.3260 kDa chaperonin OS=Pseudomonas fluorescens (stra... [more]
CH60_PELPB2.543e-5750.6860 kDa chaperonin OS=Pelodictyon phaeoclathratifor... [more]
CH60_BUCAP2.543e-5749.7760 kDa chaperonin OS=Buchnera aphidicola subsp. Sc... [more]
CH60_AZOPC2.543e-5750.6860 kDa chaperonin OS=Azobacteroides pseudotrichony... [more]
CH601_PROMP2.935e-5748.4260 kDa chaperonin 1 OS=Prochlorococcus marinus sub... [more]
CH60_PELUB2.937e-5748.8760 kDa chaperonin OS=Pelagibacter ubique GN=groL P... [more]
CH604_SINMW2.937e-5749.3260 kDa chaperonin 4 OS=Sinorhizobium medicae (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-B04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736420 ID=EY736420; Name=EY736420; organism=Citrus sinensis; type=EST; length=796bp
CACGCGTCCGCCCACGCGTCCGGATGACCTGATTGGGACAATGATCGCCG
ATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCATCA
TCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGACAG
GGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTGTTG
AATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCAATA
AAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACCATT
GCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAGTCG
TCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCTGGT
TTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGACTGG
AGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAG
TTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACT
ACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGC
ACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTNTATGACTCANAGA
AACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGGTTGCTGTTATCTA
AGTTGGAGCTGCCCCAGAAACTGAGCTTGATGACCGTAAACTCCGTTTTG
AAGATGCCAAGAATGCGACTTTTGCCCCCATAGAAGGAGGGATTGT
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