EY736420

Overview
NameEY736420
Unique NameEY736420
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_OENOB (60 kDa chaperonin OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=groL PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.829e-57
Identity = 109/218 (50.00%), Postives = 148/218 (67.89%), Query Frame = 2
Query:   32 IGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            IG +IADA++KVG DGV+                GM+ DRGY+S  FVT+ +K+    +N  +L+TDQKI  I+DI+P+L+   +    LLIIA+D+TGEAL TLV+NKLRG  NVAA+KAPGFG+RRKA LQDIAI+TGA     DLGL +++ +++QLG A +VTI KD TTI+     K  +  RI  +++E+  T S +D  KL ER+AKL+GG
Sbjct:  156 IGKLIADAMEKVGHDGVITIEESKGIETELDVVEGMQFDRGYMSQYFVTDNDKMETNLDNPYLLITDQKIGNIQDILPVLQSVVEQGRSLLIIADDITGEALPTLVLNKLRGTFNVAAVKAPGFGDRRKAQLQDIAILTGATVVTEDLGLQLKDVTIDQLGQANRVTITKDKTTIVEGKGDKTALADRIKSIRQEIDSTTSDFDREKLQERLAKLAGG 373          

HSP 2 Score: 31.9574 bits (71), Expect = 3.829e-57
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGG 791
            ETEL ++K R EDA NAT A +E G
Sbjct:  384 ETELKEKKYRIEDALNATRAAVEEG 408          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_CLOBO (60 kDa chaperonin OS=Clostridium botulinum GN=groL PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 3.829e-57
Identity = 107/221 (48.42%), Postives = 152/221 (68.78%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG +IADA+++VG +GV+                GM+ DRGY+SP  VT+ EK+    EN  +L+TD+KIS I++I+P+LE+  Q    LLIIAED+ GEALATLVVNKLRG     A+KAPGFG+RRK +L+DIAI+TG E  + +LG  I++ +++ LGTA  + + K++TTI+    SK EI+ RI Q+K+++ ET S +D  KL ER+AK++GG
Sbjct:  153 DPEIGKLIADAMERVGNEGVITVEESNTMATELEVVEGMQFDRGYLSPYMVTDAEKMEAVLENPYILLTDKKISNIQEILPILEQIVQQGKKLLIIAEDIEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLRDIAILTGGEVISEELGREIKDVTLDMLGTAESIKVTKENTTIVNGKGSKAEIEDRIGQIKRQIEETTSEFDKEKLQERLAKIAGG 373          

HSP 2 Score: 33.4982 bits (75), Expect = 3.829e-57
Identity = 17/26 (65.38%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            ETEL +RKLR EDA  AT A +E GI
Sbjct:  384 ETELKERKLRIEDALAATKAAVEEGI 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_STRSV (60 kDa chaperonin OS=Streptococcus sanguinis (strain SK36) GN=groL PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.829e-57
Identity = 104/218 (47.71%), Postives = 149/218 (68.35%), Query Frame = 2
Query:   32 IGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            +G  I++A++KVG DGV+                GM+ DRGY+S   VT+ EK++ E +N  +L+TD+KIS I++I+PLLE   +   PLLI+A+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A KVT+ KDST I+  + + + I  R+A +K ++  + S +D  KL ER+AKLSGG
Sbjct:  156 VGEYISEAMEKVGNDGVITIEESKGMETELDVVEGMQFDRGYLSQYMVTDNEKMVAELDNPYILITDKKISNIQEILPLLENILKTNRPLLIVADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITDDLGLELKDATIEALGQASKVTVDKDSTVIVEGSGNPEAIANRVAVIKSQIESSTSEFDREKLQERLAKLSGG 373          

HSP 2 Score: 34.2686 bits (77), Expect = 3.829e-57
Identity = 17/26 (65.38%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            ETEL + KLR EDA NAT A +E GI
Sbjct:  384 ETELKEMKLRIEDALNATRAAVEEGI 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_STRSA (60 kDa chaperonin OS=Streptococcus sanguis GN=groL PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.829e-57
Identity = 104/218 (47.71%), Postives = 149/218 (68.35%), Query Frame = 2
Query:   32 IGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            +G  I++A++KVG DGV+                GM+ DRGY+S   VT+ EK++ E +N  +L+TD+KIS I++I+PLLE   +   PLLI+A+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A KVT+ KDST I+  + + + I  R+A +K ++  + S +D  KL ER+AKLSGG
Sbjct:  156 VGEYISEAMEKVGNDGVITIEESKGMETELDVVEGMQFDRGYLSQYMVTDNEKMVAELDNPYILITDKKISNIQEILPLLENILKTNRPLLIVADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITDDLGLELKDATIEALGQASKVTVDKDSTVIVEGSGNPEAIANRVAVIKSQIESSTSEFDREKLQERLAKLSGG 373          

HSP 2 Score: 34.2686 bits (77), Expect = 3.829e-57
Identity = 17/26 (65.38%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            ETEL + KLR EDA NAT A +E GI
Sbjct:  384 ETELKEMKLRIEDALNATRAAVEEGI 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_STAAU (60 kDa chaperonin OS=Staphylococcus aureus GN=groL PE=1 SV=3)

HSP 1 Score: 207.994 bits (528), Expect = 3.829e-57
Identity = 102/222 (45.95%), Postives = 153/222 (68.92%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXX-GMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ IG  I++A +KVG DGV+                 GM+ DRGY SP  VT+ +K++ E E   +LVTD+KIS+ +DI+PLLE+  Q   P+LI+A++V G+AL  +V+N++RG     A+KAPGFG+RRKA+L+D+AI+TGA+    DLGL +++ S++ LGTA KV + KD+TT++     ++ I AR++QLK ++ ET+S +D  KL ER+AKL+GG
Sbjct:  153 DEEIGRYISEATEKVGNDGVITIITIEESNRLNTELELGMQFDRGYQSPYMVTDSDKMVAELERPYILVTDKKISSFQDILPLLEQVVQSNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGG 374          

HSP 2 Score: 35.4242 bits (80), Expect = 3.829e-57
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            ETEL +RKLR EDA N+T A +E GI
Sbjct:  385 ETELKERKLRIEDALNSTRAAVEEGI 410          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_SULMW (60 kDa chaperonin OS=Sulcia muelleri (strain GWSS) GN=groL PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.338e-57
Identity = 112/221 (50.68%), Postives = 156/221 (70.59%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ IG +I+ A DKVG +GV+                GM+ DRGY SP FVTN +K+I EF+N  +L++D+KIS++KD++P+LE   Q   PLLII+E+V GEALATLVVNK+RG L VAA+KAPGFG+RRKA+L+DIAI+TG    + + G  +E+T +  LG A +VTI KD+TTI+     K +I++R+ Q+K ++ +T S YD  KL ER+AKL+GG
Sbjct:  155 DEAIGELISVAFDKVGKEGVITVEEAKGIETTVDVVEGMQFDRGYQSPYFVTNSDKMITEFDNPYILLSDKKISSMKDLLPILEPVAQSGKPLLIISEEVEGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEETGSKLEDTKLSFLGKAERVTIDKDNTTIVNGNGKKSDIESRVNQIKAQIEKTTSDYDKEKLQERLAKLAGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_PSEF5 (60 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=groL PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.338e-57
Identity = 107/221 (48.42%), Postives = 160/221 (72.40%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ IG +IA+A++KVG +GV+                GM+ DRGY+SP F+  P+ ++ E +   +L+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIA++TG    + ++GL +E+T++E LG A++V + K++TTII  A  + +IQAR+ Q+++++A+T S YD  KL ER+AKLSGG
Sbjct:  155 DNSIGDIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDGPLILLVDKKISNIREMLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTVISEEIGLSLESTTLEHLGNAKRVILSKENTTIIDGAGVEADIQARVTQIRQQVADTSSDYDREKLQERLAKLSGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_PARD8 (60 kDa chaperonin OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=groL PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.338e-57
Identity = 110/221 (49.77%), Postives = 154/221 (69.68%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ IG +IA+A+ +V  +GV+                GM+ DRGYISP FVT+ EK+  + EN  +L+ D+KIS +KD++P+LE T Q   PLLIIAED+  EALATLVVN+LRG L + A+KAPGFG+RRKA+L+DIA++TG    + + GL +E  +++ LGTA K+T+ KD+TTI+  A  K+ IQARI Q+K ++  T S YD  KL ER+AK++GG
Sbjct:  155 DEAIGKLIAEAMQRVKTEGVITVEEAKGTETTVDVVEGMQFDRGYISPYFVTDTEKMECQMENPYILIYDKKISVLKDLLPILEPTVQSGRPLLIIAEDIDSEALATLVVNRLRGSLKICAVKAPGFGDRRKAMLEDIAVLTGGTVISEEKGLKLEGATMDMLGTAEKITVDKDTTTIVNGAGDKEAIQARIGQIKIQMENTTSDYDKEKLQERLAKMAGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_BUCRM (60 kDa chaperonin OS=Buchnera aphidicola subsp. Rhopalosiphum maidis GN=groL PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.338e-57
Identity = 108/221 (48.87%), Postives = 156/221 (70.59%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ +G +IA+A++KVG DGV+                GM+ DRGY+SP F+  PE  +VE EN  +L+ D+KIS +++++P+LE   +   PLLII+ED+ GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDI+++TG    + +L + +E +++E LG A++V I KD+TTII     K  IQ+RI+Q+++E+ E  S YD  KL ER+AKLSGG
Sbjct:  155 DEKVGALIAEAMEKVGNDGVITVEEGTGLQNELEVVKGMQFDRGYLSPYFINKPETGVVELENPYILMADKKISNVREMLPILESVAKSGKPLLIISEDLEGEALATLVVNSMRGIVKVAAVKAPGFGDRRKAMLQDISVLTGGSVISEELAMDLEKSTLEDLGQAKRVVINKDTTTIIGGVGEKQAIQSRISQIRQEIQEATSDYDKEKLNERLAKLSGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_BUCCC (60 kDa chaperonin OS=Buchnera aphidicola subsp. Cinara cedri GN=groL PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.338e-57
Identity = 110/221 (49.77%), Postives = 159/221 (71.95%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ +G++IA+A++KVG DGV+                GM+ DRGY+SP F+  PE  +VE EN  +L+ D+KIS I++++P+LE   +   PLLII+ED+ GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDI+I+TG    + +L + +E +S+E LG A++V I KD+TTII    +K+ I++RI+Q+++E+ E  S YD  KL ER+AKLSGG
Sbjct:  155 DEKVGSLIAEAMEKVGNDGVITVEEGTGLQNELEVVKGMQFDRGYLSPYFINQPETGLVELENPYILMVDKKISNIRELLPILEAVAKSSKPLLIISEDLEGEALATLVVNSMRGIVKVAAVKAPGFGDRRKAMLQDISILTGGSVISEELAMDLEKSSLEDLGQAKRVVINKDTTTIIDGNGNKEAIKSRISQIRQEINEATSDYDKEKLNERLAKLSGG 375          
The following BLAST results are available for this feature:
BLAST of EY736420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_OENOB3.829e-5750.0060 kDa chaperonin OS=Oenococcus oeni (strain BAA-3... [more]
CH60_CLOBO3.829e-5748.4260 kDa chaperonin OS=Clostridium botulinum GN=groL... [more]
CH60_STRSV3.829e-5747.7160 kDa chaperonin OS=Streptococcus sanguinis (stra... [more]
CH60_STRSA3.829e-5747.7160 kDa chaperonin OS=Streptococcus sanguis GN=groL... [more]
CH60_STAAU3.829e-5745.9560 kDa chaperonin OS=Staphylococcus aureus GN=groL... [more]
CH60_SULMW4.338e-5750.6860 kDa chaperonin OS=Sulcia muelleri (strain GWSS)... [more]
CH60_PSEF54.338e-5748.4260 kDa chaperonin OS=Pseudomonas fluorescens (stra... [more]
CH60_PARD84.338e-5749.7760 kDa chaperonin OS=Parabacteroides distasonis (s... [more]
CH60_BUCRM4.338e-5748.8760 kDa chaperonin OS=Buchnera aphidicola subsp. Rh... [more]
CH60_BUCCC4.338e-5749.7760 kDa chaperonin OS=Buchnera aphidicola subsp. Ci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-B04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736420 ID=EY736420; Name=EY736420; organism=Citrus sinensis; type=EST; length=796bp
CACGCGTCCGCCCACGCGTCCGGATGACCTGATTGGGACAATGATCGCCG
ATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCATCA
TCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGACAG
GGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTGTTG
AATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCAATA
AAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACCATT
GCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAGTCG
TCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCTGGT
TTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGACTGG
AGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAG
TTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACT
ACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGC
ACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTNTATGACTCANAGA
AACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGGTTGCTGTTATCTA
AGTTGGAGCTGCCCCAGAAACTGAGCTTGATGACCGTAAACTCCGTTTTG
AAGATGCCAAGAATGCGACTTTTGCCCCCATAGAAGGAGGGATTGT
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