EY736420

Overview
NameEY736420
Unique NameEY736420
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH602_RHIME (60 kDa chaperonin 2 OS=Rhizobium meliloti GN=groL2 PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 5.665e-57
Identity = 111/221 (50.23%), Postives = 160/221 (72.40%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG  +A+A++KVG +GV+                GME DRGY+SP F+TN EK+ VE E+A +L+ ++K+S ++ +IP+LE   Q   PLLIIAEDV GEALATLVVNKLRG L +AA+KAPGFG+RRK++L+DIAI+TG    + +LG+ +ENT+++ LG A+++ + K++TTI+  A SK++I  R+AQ+K ++ +T S YD  KL ER+AKL+GG
Sbjct:  155 DAEIGRYLAEAMEKVGNEGVITVEEAKTAEIELEVVEGMEFDRGYLSPYFITNQEKMRVELEDAYILLHEKKLSNLQAMIPILESVIQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKSMLEDIAILTGGTVISEELGIKLENTTMDTLGRAKRIMVDKETTTIVDGAGSKEDIGGRVAQIKAQIEDTTSDYDREKLQERLAKLAGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH602_RENSM (60 kDa chaperonin 2 OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groL2 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.665e-57
Identity = 110/218 (50.46%), Postives = 155/218 (71.10%), Query Frame = 2
Query:   32 IGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            IG ++A+A DKVG DGV+                GM+ D+GY+SP FVT+ E+     E+A +L+   KIS+I++ +PLLEKT +   PL IIAEDV GEAL+TL+VN+LRG LNV A+KAPGFG+RRKA+LQDIAI+TGA+  + ++GL ++   +E LGTAR++T+ KD+TTI+  A +  ++  R++QL+ EL  TDS +D  KL ER+AKL+GG
Sbjct:  155 IGELLAEAFDKVGKDGVITIEESSSMVTELVLTEGMQFDKGYLSPHFVTDHERQEAVLEDALILINQGKISSIQEFLPLLEKTLKASKPLFIIAEDVDGEALSTLIVNRLRGNLNVVAVKAPGFGDRRKAMLQDIAILTGAQVVSPEIGLSLDQVGLEVLGTARRITVTKDNTTIVDGAGTDADVADRVSQLRAELERTDSDWDKEKLQERLAKLAGG 372          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH602_METCA (60 kDa chaperonin 2 OS=Methylococcus capsulatus GN=groL2 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.665e-57
Identity = 112/221 (50.68%), Postives = 155/221 (70.14%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ IG +IA A+D VG +GV+                GM+ DRGY+SP F+   + + VE EN  VL+ D+KIS+I+D++P+LEKT +    LLIIAEDV GEALATLVVN +RGIL V A+KAPGFG+RRKA+L+DIAI+TG +  + +LGL +E   +  LG A+K+ I K++TTI+  A S D I+AR+ Q++K++ +T S YD  KL ER+AKL+GG
Sbjct:  155 DESIGQIIAQAMDTVGKEGVITVEEGSGLQNELDVVEGMQFDRGYLSPYFINKQDTMGVELENPYVLLHDKKISSIRDLLPVLEKTAKAGRSLLIIAEDVDGEALATLVVNNMRGILKVCAVKAPGFGDRRKAMLEDIAILTGGQVISEELGLSLEKVELTDLGQAKKIQINKETTTIVDGAGSADAIKARVEQIRKQIEDTTSDYDREKLQERVAKLAGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH601_ROSCS (60 kDa chaperonin 1 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=groL1 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.665e-57
Identity = 112/221 (50.68%), Postives = 155/221 (70.14%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG +IA+ ++KVG DGV+                GM+IDRGYISP FVTNPE++  E E+  +L+TD+KIS+I+DI+P+LEK  Q+   L+I+AEDV GEALATLVVNKLRG +N  A+KAPGFG+RRKA+LQDIAI+TG    + ++G  +++ ++E LG AR+V   KD+TT I     +  I+ARI Q++ ++  T S +D  KL ER+AKL+GG
Sbjct:  153 DSEIGDLIAEVMEKVGKDGVITVEESKGIAFEKEYTEGMQIDRGYISPYFVTNPERMEAELEDPYILITDKKISSIQDILPVLEKALQVTKNLVIVAEDVDGEALATLVVNKLRGTINALAVKAPGFGDRRKAMLQDIAILTGGTLISEEIGRKLDSATIEDLGRARRVVSDKDNTTFIEGRGDERAIRARIEQIRAQIETTTSDFDREKLQERLAKLAGG 373          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH603_NITWN (60 kDa chaperonin 3 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL3 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.508e-57
Identity = 108/221 (48.87%), Postives = 153/221 (69.23%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG MIA A+ KVG DGV+                GM+ DRGY+SP FVTN EK+  E ++A +L+ ++K++ ++ ++P+LE   +   PLLI+AEDV GEALA LVVN+LRG L VAA+KAPGFG+RRKA+L+DIAI+T  +  + +LG+ +EN ++  LG A+KV I K++TTI+  A  K +I+AR+ Q++  + ET S YD  KL ER+AKL+GG
Sbjct:  155 DASIGKMIAQAMQKVGNDGVITVEENKSLETDVDIVEGMKFDRGYLSPYFVTNAEKMAAELDDAYILLHEKKLTGLQALLPVLEAVVKSGKPLLIVAEDVEGEALAALVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTSGQLISDELGMKLENVTLNMLGRAKKVLIDKENTTIVNGAGKKKDIEARVGQIRARIEETTSDYDREKLQERLAKLAGG 375          

HSP 2 Score: 28.4906 bits (62), Expect = 6.508e-57
Identity = 14/26 (53.85%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            E E+ ++K R EDA NAT A +E GI
Sbjct:  386 EIEVKEKKDRVEDALNATRAAVEEGI 411          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.508e-57
Identity = 105/221 (47.51%), Postives = 150/221 (67.87%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ IG +IADA++KVG DGV+                GM+ DRGY+S   VT+ EK+   F +  +L+TD+KI+ +++I+P+LE+  Q    LLIIAED+ GEALATLV+NKLRG     A+KAPGFG+RRKA+L DIA++TGA   + +LG  ++  +++ LGTAR V + KD+TTI+  A     I+ R+ Q+K+++ ET S +D  KL ER+AKLSGG
Sbjct:  153 DEEIGQLIADAMEKVGNDGVITVEESKSMGTTLDVVEGMQFDRGYLSAYMVTDTEKMEAVFNDPYILLTDKKINTVQEILPVLEQIVQQGRKLLIIAEDIEGEALATLVLNKLRGTFECVAVKAPGFGDRRKAMLDDIAVLTGATVISDELGYDLKTATIDMLGTARTVKVDKDNTTIVEGAGDSSAIKDRVNQIKRQIEETTSDFDKEKLQERLAKLSGG 373          

HSP 2 Score: 35.039 bits (79), Expect = 6.508e-57
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            ETEL +RKLR EDA NAT A +E G+
Sbjct:  384 ETELKERKLRIEDALNATRAGVEEGM 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_PETMO (60 kDa chaperonin OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 6.509e-57
Identity = 109/218 (50.00%), Postives = 145/218 (66.51%), Query Frame = 2
Query:   32 IGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            IG +IA+A+DKVG DGV+                GM+ DRGYISP FVTN EK+  E +   +L+TD+KISA+K I+P+LEK  Q   PL+IIAEDV GEAL+TLV+NKLRG L   A+KAPGFG+RRK +L+DIAI+TG    + ++GL +E+ S+  LG A  V + K+ T I+        I+ RIAQ+K ++  T S Y+   L ER+AKLSGG
Sbjct:  156 IGNIIAEAMDKVGEDGVITVEDSKTLETYVEFTEGMQFDRGYISPYFVTNTEKMEAEMKEPYILITDRKISAVKSIVPILEKVAQAGKPLVIIAEDVEGEALSTLVLNKLRGTLESVAVKAPGFGDRRKEMLRDIAILTGGTVISEEIGLTLEDISINDLGQADLVRVAKEDTIIVGGKGEPTAIKERIAQIKAQIENTSSDYEKETLQERLAKLSGG 373          

HSP 2 Score: 30.8018 bits (68), Expect = 6.509e-57
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            ETEL ++K R EDA +AT A +E GI
Sbjct:  384 ETELKEKKHRIEDALSATRAAVEEGI 409          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_CHLPD (60 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groL PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.399e-57
Identity = 110/221 (49.77%), Postives = 156/221 (70.59%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG +IA+A+DKVG DGV+                GM+ DRGY+SP FVTNPE +  E E+  +L+ D+KIS +K+++P+LEK+ Q   PLLII+ED+ GEALATLVVN+LRG L V A+KAPGFG+RRKA+L+DIAI+TG    + + G  +EN ++  LG A ++T+ KD+TT++      +EI+ARI ++K ++ ++ S YD+ KL ER+AKLSGG
Sbjct:  155 DPEIGELIAEAMDKVGKDGVITVEEAKGMDTELKVVEGMQFDRGYLSPYFVTNPENMEAELEDPLILIHDKKISNMKELLPILEKSAQSGRPLLIISEDIEGEALATLVVNRLRGTLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEEKGYKLENATLTYLGQAGRITVDKDNTTVVEGKGKPEEIKARINEIKGQIEKSTSDYDTEKLQERLAKLSGG 375          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH604_FRASC (60 kDa chaperonin 4 OS=Frankia sp. (strain CcI3) GN=groL4 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.399e-57
Identity = 110/221 (49.77%), Postives = 153/221 (69.23%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D  IG +IA+A+DKVG +GV+                GM  D+GYISP FVT+ ++     ++  +L+ + KISA+KD++PLLEK  Q   PL IIAEDV GEALATLVVNK+RG    AA+KAPGFG+RRKA+L DIAI+TG +  + D+GL +E+TS++ LG ARK+ + KD TT++  A   D+I  R++Q++ E+ ++DS YD  KL ER+AKL+GG
Sbjct:  153 DSAIGGLIAEALDKVGKEGVVTVEESNTFGLELELTEGMRFDKGYISPYFVTDADRQEAVLDDPYILIVNSKISAVKDLLPLLEKVMQTGKPLAIIAEDVEGEALATLVVNKIRGTFKSAAVKAPGFGDRRKAILGDIAILTGGQVISEDVGLKLESTSLDLLGRARKIVVTKDETTVVEGAGDPDQIAGRVSQIRNEIEKSDSDYDREKLQERLAKLAGG 373          
BLAST of EY736420 vs. ExPASy Swiss-Prot
Match: CH60_ZYMMO (60 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=3 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 8.485e-57
Identity = 106/221 (47.96%), Postives = 155/221 (70.14%), Query Frame = 2
Query:   23 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSXKLAERIAKLSGG 685
            D+ +G  IA+A++KVG +GV+                GM+ DRGY+SP F+TNPEK++ E  +  +L+ ++K+S ++ I+P+LE   Q   PLLIIAED+ GEALATLVVNKLRG L VAA+KAPGFG+RRKA+L+DIAI+T  E  + DLG+ +EN ++  LG+A++V+I K++TTI+  A  +  I+ R+  ++ ++  T S YD  KL ER+AKL+GG
Sbjct:  155 DEEVGRRIAEAMEKVGKEGVITVEEAKGFDFELDVVEGMQFDRGYLSPYFITNPEKMVAELADPYILIYEKKLSNLQSILPILESVVQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTKGELISEDLGIKLENVTLNMLGSAKRVSITKENTTIVDGAGDQSTIKDRVEAIRSQIEATTSDYDREKLQERVAKLAGG 375          

HSP 2 Score: 25.7942 bits (55), Expect = 8.485e-57
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  717 ETELDDRKLRFEDAKNATFAPIEGGI 794
            E E+ +RK R +DA +AT A ++ GI
Sbjct:  386 EVEVKERKDRVDDALHATRAAVQEGI 411          
The following BLAST results are available for this feature:
BLAST of EY736420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_RHIME5.665e-5750.2360 kDa chaperonin 2 OS=Rhizobium meliloti GN=groL2... [more]
CH602_RENSM5.665e-5750.4660 kDa chaperonin 2 OS=Renibacterium salmoninarum ... [more]
CH602_METCA5.665e-5750.6860 kDa chaperonin 2 OS=Methylococcus capsulatus GN... [more]
CH601_ROSCS5.665e-5750.6860 kDa chaperonin 1 OS=Roseiflexus castenholzii (s... [more]
CH603_NITWN6.508e-5748.8760 kDa chaperonin 3 OS=Nitrobacter winogradskyi (s... [more]
CH60_ALKOO6.508e-5747.5160 kDa chaperonin OS=Alkaliphilus oremlandii (stra... [more]
CH60_PETMO6.509e-5750.0060 kDa chaperonin OS=Petrotoga mobilis (strain DSM... [more]
CH60_CHLPD7.399e-5749.7760 kDa chaperonin OS=Chlorobium phaeobacteroides (... [more]
CH604_FRASC7.399e-5749.7760 kDa chaperonin 4 OS=Frankia sp. (strain CcI3) G... [more]
CH60_ZYMMO8.485e-5747.9660 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-B04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736420 ID=EY736420; Name=EY736420; organism=Citrus sinensis; type=EST; length=796bp
CACGCGTCCGCCCACGCGTCCGGATGACCTGATTGGGACAATGATCGCCG
ATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCATCA
TCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGACAG
GGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTGTTG
AATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCAATA
AAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACCATT
GCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAGTCG
TCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCTGGT
TTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGACTGG
AGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCAG
TTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCCACT
ACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGC
ACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTNTATGACTCANAGA
AACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGGTTGCTGTTATCTA
AGTTGGAGCTGCCCCAGAAACTGAGCTTGATGACCGTAAACTCCGTTTTG
AAGATGCCAAGAATGCGACTTTTGCCCCCATAGAAGGAGGGATTGT
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