EY736406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736406 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 5.905e-67 Identity = 80/97 (82.47%), Postives = 87/97 (89.69%), Query Frame = 2 Query: 308 SPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLINIADNPTCVQ-PLVCTQEENP-CPII 592 +PIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATL+NIAD PT VQ P + + ENP PI+ Sbjct: 175 NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIV 271 HSP 2 Score: 120.939 bits (302), Expect = 5.905e-67 Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 3 Query: 27 RYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 218 +Y+ DNT+ G YIAPAFMDKLVVH++KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI Sbjct: 111 KYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 174
BLAST of EY736406 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 155.221 bits (391), Expect = 4.940e-66 Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 2 Query: 308 SPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLINIADNPTCVQ-PLVCTQEENP-CPII 592 +PIMMSAGELESGNAGEPAKLIRQRYREA+D+I+KGKM CL INDLDAGAGRMGGTTQYTVNNQMVNATL+NIADNPT VQ P + +E+NP PII Sbjct: 181 TPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPII 277 HSP 2 Score: 118.242 bits (295), Expect = 4.940e-66 Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 3 Query: 30 YNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 218 YN DN +DG YIA FMDKLVVH++KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI Sbjct: 118 YNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 180
BLAST of EY736406 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.862e-65 Identity = 78/97 (80.41%), Postives = 87/97 (89.69%), Query Frame = 2 Query: 308 SPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLINIADNPTCVQ-PLVCTQEENP-CPII 592 +PIMMSAGELESGNAGEPAKLIRQRYREA+D+I+KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATL+NIADNPT VQ P + +E+N PII Sbjct: 189 NPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPII 285 HSP 2 Score: 120.553 bits (301), Expect = 1.862e-65 Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 3 Query: 27 RYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 218 +YN DN DG YIAPAF+DKLVVHI KNFM+LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGI Sbjct: 125 QYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGI 188
BLAST of EY736406 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.862e-65 Identity = 80/97 (82.47%), Postives = 86/97 (88.66%), Query Frame = 2 Query: 308 SPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLINIADNPTCVQ-PLVCTQEENP-CPII 592 +PIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATL+NIADNPT VQ P + +EEN PII Sbjct: 187 NPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPII 283 HSP 2 Score: 119.013 bits (297), Expect = 1.862e-65 Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 3 Query: 36 LDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 218 LDN DG YIAPAF+DKLVVHITKNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI Sbjct: 126 LDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 186
BLAST of EY736406 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 2.211e-63 Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 2 Query: 308 SPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLINIADNPTCVQ-PLVCTQEENP-CPII 592 +PIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDL+ GAGRMGGTTQYTVNNQMVNATL+NIADNPT VQ P + +++N PII Sbjct: 183 NPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPII 279 HSP 2 Score: 116.701 bits (291), Expect = 2.211e-63 Identity = 51/64 (79.69%), Postives = 60/64 (93.75%), Query Frame = 3 Query: 27 RYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 218 +Y++DN + YIAPAFMDKLVVHITKNF++LPNIK+PLILG+WGGKGQGKSFQCELVFAK+GI Sbjct: 119 KYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGI 182
BLAST of EY736406 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.277e-57 Identity = 77/97 (79.38%), Postives = 84/97 (86.60%), Query Frame = 2 Query: 308 SPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLINIADNPTCVQ-PLVCTQEENP-CPII 592 +PI+MSAGELESGNAGEPAKLIR RYREA+DII+KG+MC L INDLDAGAGRMG TTQYTVNNQMVNATL+NIADNPT VQ P V EE P PI+ Sbjct: 158 APIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIV 254 HSP 2 Score: 99.3673 bits (246), Expect = 1.277e-57 Identity = 43/64 (67.19%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 27 RYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 218 R + +N DG YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L + K+GI Sbjct: 94 RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGI 157
BLAST of EY736406 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.354e-44 Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 317 MMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLINIADNPTCVQPLVCTQEENP 580 ++S GELES +AG+PA+LIR RYRE A++I+ +GKMC LMINDLDAGAGR TQYTVN Q+VNATL+NIADNPT VQ L + + NP Sbjct: 60 LISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQ-LPGSYDSNP 147 HSP 2 Score: 87.0409 bits (214), Expect = 6.354e-44 Identity = 38/54 (70.37%), Postives = 47/54 (87.04%), Query Frame = 3 Query: 60 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGIK 221 YIAP F+DKL VHITKNF+++P ++VPLILGI G KG+GK+FQCEL F KMGI+ Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIE 57
BLAST of EY736406 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 8.281e-44 Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 2 Query: 317 MMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLINIADNPTCVQ 550 ++S GELES +AG+PA+LIR RYRE A++I+ +GKMC LMINDLDAGAGR TQYTVN Q+VNATL+NIADNPT VQ Sbjct: 60 LISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQ 138 HSP 2 Score: 87.4261 bits (215), Expect = 8.281e-44 Identity = 38/54 (70.37%), Postives = 47/54 (87.04%), Query Frame = 3 Query: 60 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGIK 221 YIAP F+DKL VHITKNF++LP ++VPLILGI G KG+GK+FQCEL F KMG++ Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVE 57 The following BLAST results are available for this feature:
BLAST of EY736406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736406 ID=EY736406; Name=EY736406; organism=Citrus sinensis; type=EST; length=872bpback to top |