EY736341

Overview
NameEY736341
Unique NameEY736341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_METVS (50S ribosomal protein L6P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 5.073e-15
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 3
Query:  345 ETFLGEKKVRKVDMLDGVTVVRSEKVK-DELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554
            + FLGEK  R   +++GVTV    KV  +E+I+ G + E V ++AA I+Q   VK  D R F DGIY+ E+
Sbjct:  111 DNFLGEKYPRTAKVMEGVTV----KVNGEEVIVSGTNKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177          

HSP 2 Score: 50.0618 bits (118), Expect = 5.073e-15
Identity = 23/66 (34.85%), Postives = 40/66 (60.61%), Query Frame = 2
Query:  161 KLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            K+ +++ F  +  +A + T  SH+ N+I GV++G+ YK+   YAHFP+  +      ++ I NFLG
Sbjct:   52 KVVVESTFPKKNQTAMVGTYRSHIQNMIKGVSEGFEYKLVIRYAHFPMKVTF--KGNTVIIDNFLG 115          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_METVA (50S ribosomal protein L6P OS=Methanococcus vannielii GN=rpl6p PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 5.073e-15
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 3
Query:  345 ETFLGEKKVRKVDMLDGVTVVRSEKVK-DELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554
            + FLGEK  R   +++GVTV    KV  +E+I+ G + E V ++AA I+Q   VK  D R F DGIY+ E+
Sbjct:  111 DNFLGEKYPRTAKVMEGVTV----KVNGEEVIVSGTNKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177          

HSP 2 Score: 50.0618 bits (118), Expect = 5.073e-15
Identity = 23/66 (34.85%), Postives = 40/66 (60.61%), Query Frame = 2
Query:  161 KLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            K+ +++ F  +  +A + T  SH+ N+I GV++G+ YK+   YAHFP+  +      ++ I NFLG
Sbjct:   52 KVVVESTFPKKNQTAMVGTYRSHIQNMIKGVSEGFEYKLVIRYAHFPMKVTF--KGNTVIIDNFLG 115          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_METBU (50S ribosomal protein L6P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 4.129e-14
Identity = 24/71 (33.80%), Postives = 38/71 (53.52%), Query Frame = 2
Query:  146 ETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            E    ++ +D+    +K  A + T  SH+ N++ GV  G+ Y M+ VY+HFP+   +    K   I NFLG
Sbjct:   45 EVNGSEIIVDSASSRKKQKAMVGTYTSHITNMMKGVVDGFEYHMKVVYSHFPMQIKVN--GKKFVINNFLG 113          

HSP 2 Score: 47.7506 bits (112), Expect = 4.129e-14
Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554
            FLGEKK R  ++L   +V  S    DE+I+ G + E V ++AA I+QK  +K  D R F DGIY+ ++
Sbjct:  111 FLGEKKPRVSNILGETSVKASG---DEVIVSGINKEDVGQTAANIEQKTKIKRFDPRVFQDGIYIVDK 175          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_HALMA (50S ribosomal protein L6P OS=Haloarcula marismortui GN=rpl6p PE=1 SV=3)

HSP 1 Score: 48.1358 bits (113), Expect = 5.657e-13
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 2
Query:  194 KTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            KT + I T  SH+ N+ +GVT+G+ Y M   Y+HFP+  ++      + I NFLG
Sbjct:   58 KTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNV--EGDEVVIENFLG 110          

HSP 2 Score: 47.3654 bits (111), Expect = 5.657e-13
Identity = 27/70 (38.57%), Postives = 42/70 (60.00%), Query Frame = 3
Query:  345 ETFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554
            E FLGEK  R+   + G T V  +   +EL + G DIE V ++AA I+Q   + + D+R F DG+Y++ +
Sbjct:  106 ENFLGEKAPRRTT-IHGDTDVEIDG--EELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_IGNH4 (50S ribosomal protein L6P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.067e-13
Identity = 34/94 (36.17%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   77 GAQRKAQPGFQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            G + + +  F H      +   EE GK+++ ++ +F +RK  A + T  +H+ N+I GVTKG+RYKM+ V++HFPI+  +      +EI NF+G
Sbjct:   30 GPKGELERDFSHAK-GIRIRVVEEEGKKQVLVETFFANRKRKALVNTVAAHIKNMITGVTKGWRYKMKIVFSHFPISVKV--VGDRVEIHNFIG 120          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_METAC (50S ribosomal protein L6P OS=Methanosarcina acetivorans GN=rpl6p PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 7.356e-13
Identity = 28/76 (36.84%), Postives = 45/76 (59.21%), Query Frame = 2
Query:  131 LMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            +M D + G+  + +DA +  ++  A + T  SH+ NL+ GV +G+  KM  VYAHFP+   +    K++ I NFLG
Sbjct:   42 IMIDVKDGE--VVVDAEYARKEQKAMVGTFASHIRNLVKGVNEGFECKMSIVYAHFPMQVKVD--GKTLIIGNFLG 113          

HSP 2 Score: 40.0466 bits (92), Expect = 7.356e-13
Identity = 26/68 (38.24%), Postives = 41/68 (60.29%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554
            FLGEKK R   ++ G T V+     +++ + G + E V ++AA I+QK  +K  D R F DGIY+ ++
Sbjct:  111 FLGEKKPRFAKII-GETKVKVSG--NDVTITGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_HYPBU (50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12
Identity = 53/182 (29.12%), Postives = 91/182 (50.00%), Query Frame = 3
Query:   12 SETMDIPDGVKIKINAKIIEVEGPRGKLSRDFST*ISTSI**PTRKPGSGSSRSTLGSVLARPAPPSGLPSATSGISSTVSPRDTATR*DXXXXXXXXXXXXXXXXXXXXXETFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSERG 557
            +E + +P+GV++ I+   + V+GP+G+L+RDFS   +  I     + G    +  + +  A     + + +  + I + ++      R                       E FLGEK  R   ++ GVTV   +  KD++I++G DIE V ++AA I+Q   VK+ D R F+DGIY+ E+G
Sbjct:    8 AEEVRVPEGVEVSIDGLKVTVKGPKGELTRDFSHARNIVIRLDEDEEGK---KVVVEAYFANRRVKALVGTIAAHIENMITGVTKGFRYKLKIVYSHFPVTVKVQGDKVVIENFLGEKAPRIAKIMPGVTV---KVQKDDVIVEGIDIEAVGQTAANIEQATKVKDKDRRVFIDGIYIYEKG 183          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_METBF (50S ribosomal protein L6P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 2.716e-12
Identity = 24/66 (36.36%), Postives = 40/66 (60.61%), Query Frame = 2
Query:  161 KLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            ++++DA    ++  A + T  SH+ NL+ GV +G+  KM  +YAHFP+   +    K++ I NFLG
Sbjct:   51 EVEVDAESSRKEQKAMVGTFTSHIKNLMKGVNEGFECKMTILYAHFPMQVKVD--GKTLIIGNFLG 114          

HSP 2 Score: 41.9726 bits (97), Expect = 2.716e-12
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 3
Query:  351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554
            FLGEKK R   +L G T V+     +E+ + G + E V ++AA I+QK  +K  D R F DGIY+ ++
Sbjct:  112 FLGEKKPRIAKIL-GETKVKVSG--NEVTVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 176          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_STAMF (50S ribosomal protein L6P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12
Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 2
Query:  161 KLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            K+ ++ +F  R+  A + T  SH+ N+I GV KGYRYK++ +Y+HFPI   + + N+ + I+NFLG
Sbjct:   53 KIIVETFFADRRKKALVGTIASHIENMIKGVLKGYRYKLKIIYSHFPITVEVDDRNRIVRIKNFLG 118          
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_ARCFU (50S ribosomal protein L6P OS=Archaeoglobus fulgidus GN=rpl6p PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 5.917e-12
Identity = 25/71 (35.21%), Postives = 38/71 (53.52%), Query Frame = 2
Query:  146 ETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358
            E G  K+++      +K  A + T   H+ NLI GV +G+ Y ++ VYAHFPI   +      + I NF+G
Sbjct:   65 EVGDGKVRVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIKVRV--EGNEVIIENFIG 133          

HSP 2 Score: 39.6614 bits (91), Expect = 5.917e-12
Identity = 23/70 (32.86%), Postives = 39/70 (55.71%), Query Frame = 3
Query:  345 ETFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554
            E F+GEK  R+  ++    V  S +   ++ + G DIE   ++AA ++Q   +K  D R F DGIY+ ++
Sbjct:  129 ENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195          
The following BLAST results are available for this feature:
BLAST of EY736341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
RL6_METVS5.073e-1543.6650S ribosomal protein L6P OS=Methanococcus vanniel... [more]
RL6_METVA5.073e-1543.6650S ribosomal protein L6P OS=Methanococcus vanniel... [more]
RL6_METBU4.129e-1433.8050S ribosomal protein L6P OS=Methanococcoides burt... [more]
RL6_HALMA5.657e-1340.0050S ribosomal protein L6P OS=Haloarcula marismortu... [more]
RL6_IGNH46.067e-1336.1750S ribosomal protein L6P OS=Ignicoccus hospitalis... [more]
RL6_METAC7.356e-1336.8450S ribosomal protein L6P OS=Methanosarcina acetiv... [more]
RL6_HYPBU2.293e-1229.1250S ribosomal protein L6P OS=Hyperthermus butylicu... [more]
RL6_METBF2.716e-1236.3650S ribosomal protein L6P OS=Methanosarcina barker... [more]
RL6_STAMF3.011e-1242.4250S ribosomal protein L6P OS=Staphylothermus marin... [more]
RL6_ARCFU5.917e-1235.2150S ribosomal protein L6P OS=Archaeoglobus fulgidu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-B02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736341 ID=EY736341; Name=EY736341; organism=Citrus sinensis; type=EST; length=895bp
CACGCGTCCGATCAGAGACGATGGACATCCCAGACGGGGTGAAAATCAAG
ATCAATGCTAAGATCATCGAGGTTGAGGGGCCCAGAGGAAAGCTCAGCCG
GGATTTCAGCACCTGAATCTCGACTTCCATCTGATGACCGACGAGGAAAC
CGGGAAGCGGAAGCTCAAGATCGACGCTTGGTTCGGTTCTCGCAAGACCA
GCGCCGCCATCAGGACTGCCCTCAGCCACGTCGGGAATCTCATCAACGGT
GTCACCAAGGGATACCGCTACAAGATGAGATTCGTCTACGCTCACTTCCC
CATCAACGCCTCCATCGGCAATGCCAACAAGTCCATCGAGATCCGAAACT
TTCTTGGGGGAGAAGAAGGTTCGCAAAGTGGATATGCTTGATGGTGTTAC
TGTTGTTCGGTCTGAGAAGGTTAAGGATGAACTCATTCTTGATGGGAATG
ACATTGAGCTTGTGTCTCGGTCTGCTGCTCTGATCGACCAGAAATGCCAT
GTGAAGAACANGGACATTAGGAAATTCCTTGACGGGATCTATGTCAGCGA
GAGAGGGCACATATTTGAAGAAAACTGACGACTAGCTCTNCATATTATGA
AATTTGTGGTCCTTCTTTTTTTAATTTTGCTCTTACCTTGTGCTTGAGGA
CATGCTTTTGGGTTGGATCCGGGATTTAAAGGAAAGGTTATGCAAATCAA
ATGGGCTGGCCGCCGATTTCCTATGGTGACGTGTATAAGTATGGGATTTT
AAGCTGTGCACGCTGGGCCCAAGGCAAGTGAGGANAGGTGGGGGAATGGC
GAGGCCGTTGGGGGGGCGCGTCTCTAGAGGGTGCTAGAGTTACGTTCCGC
GTTGTTTGGCAACGCCATAACCCTCTTAAGGTGTGCCCCCAAGTC
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