EY736341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_METVS (50S ribosomal protein L6P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl6p PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 5.073e-15 Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 345 ETFLGEKKVRKVDMLDGVTVVRSEKVK-DELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554 + FLGEK R +++GVTV KV +E+I+ G + E V ++AA I+Q VK D R F DGIY+ E+ Sbjct: 111 DNFLGEKYPRTAKVMEGVTV----KVNGEEVIVSGTNKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177 HSP 2 Score: 50.0618 bits (118), Expect = 5.073e-15 Identity = 23/66 (34.85%), Postives = 40/66 (60.61%), Query Frame = 2 Query: 161 KLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358 K+ +++ F + +A + T SH+ N+I GV++G+ YK+ YAHFP+ + ++ I NFLG Sbjct: 52 KVVVESTFPKKNQTAMVGTYRSHIQNMIKGVSEGFEYKLVIRYAHFPMKVTF--KGNTVIIDNFLG 115
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_METVA (50S ribosomal protein L6P OS=Methanococcus vannielii GN=rpl6p PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 5.073e-15 Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 345 ETFLGEKKVRKVDMLDGVTVVRSEKVK-DELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554 + FLGEK R +++GVTV KV +E+I+ G + E V ++AA I+Q VK D R F DGIY+ E+ Sbjct: 111 DNFLGEKYPRTAKVMEGVTV----KVNGEEVIVSGTNKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177 HSP 2 Score: 50.0618 bits (118), Expect = 5.073e-15 Identity = 23/66 (34.85%), Postives = 40/66 (60.61%), Query Frame = 2 Query: 161 KLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358 K+ +++ F + +A + T SH+ N+I GV++G+ YK+ YAHFP+ + ++ I NFLG Sbjct: 52 KVVVESTFPKKNQTAMVGTYRSHIQNMIKGVSEGFEYKLVIRYAHFPMKVTF--KGNTVIIDNFLG 115
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_METBU (50S ribosomal protein L6P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl6p PE=3 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 4.129e-14 Identity = 24/71 (33.80%), Postives = 38/71 (53.52%), Query Frame = 2 Query: 146 ETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358 E ++ +D+ +K A + T SH+ N++ GV G+ Y M+ VY+HFP+ + K I NFLG Sbjct: 45 EVNGSEIIVDSASSRKKQKAMVGTYTSHITNMMKGVVDGFEYHMKVVYSHFPMQIKVN--GKKFVINNFLG 113 HSP 2 Score: 47.7506 bits (112), Expect = 4.129e-14 Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 3 Query: 351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554 FLGEKK R ++L +V S DE+I+ G + E V ++AA I+QK +K D R F DGIY+ ++ Sbjct: 111 FLGEKKPRVSNILGETSVKASG---DEVIVSGINKEDVGQTAANIEQKTKIKRFDPRVFQDGIYIVDK 175
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_HALMA (50S ribosomal protein L6P OS=Haloarcula marismortui GN=rpl6p PE=1 SV=3) HSP 1 Score: 48.1358 bits (113), Expect = 5.657e-13 Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 2 Query: 194 KTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358 KT + I T SH+ N+ +GVT+G+ Y M Y+HFP+ ++ + I NFLG Sbjct: 58 KTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNV--EGDEVVIENFLG 110 HSP 2 Score: 47.3654 bits (111), Expect = 5.657e-13 Identity = 27/70 (38.57%), Postives = 42/70 (60.00%), Query Frame = 3 Query: 345 ETFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554 E FLGEK R+ + G T V + +EL + G DIE V ++AA I+Q + + D+R F DG+Y++ + Sbjct: 106 ENFLGEKAPRRTT-IHGDTDVEIDG--EELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_IGNH4 (50S ribosomal protein L6P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl6p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.067e-13 Identity = 34/94 (36.17%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 77 GAQRKAQPGFQHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358 G + + + F H + EE GK+++ ++ +F +RK A + T +H+ N+I GVTKG+RYKM+ V++HFPI+ + +EI NF+G Sbjct: 30 GPKGELERDFSHAK-GIRIRVVEEEGKKQVLVETFFANRKRKALVNTVAAHIKNMITGVTKGWRYKMKIVFSHFPISVKV--VGDRVEIHNFIG 120
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_METAC (50S ribosomal protein L6P OS=Methanosarcina acetivorans GN=rpl6p PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 7.356e-13 Identity = 28/76 (36.84%), Postives = 45/76 (59.21%), Query Frame = 2 Query: 131 LMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358 +M D + G+ + +DA + ++ A + T SH+ NL+ GV +G+ KM VYAHFP+ + K++ I NFLG Sbjct: 42 IMIDVKDGE--VVVDAEYARKEQKAMVGTFASHIRNLVKGVNEGFECKMSIVYAHFPMQVKVD--GKTLIIGNFLG 113 HSP 2 Score: 40.0466 bits (92), Expect = 7.356e-13 Identity = 26/68 (38.24%), Postives = 41/68 (60.29%), Query Frame = 3 Query: 351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554 FLGEKK R ++ G T V+ +++ + G + E V ++AA I+QK +K D R F DGIY+ ++ Sbjct: 111 FLGEKKPRFAKII-GETKVKVSG--NDVTITGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_HYPBU (50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl6p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12 Identity = 53/182 (29.12%), Postives = 91/182 (50.00%), Query Frame = 3 Query: 12 SETMDIPDGVKIKINAKIIEVEGPRGKLSRDFST*ISTSI**PTRKPGSGSSRSTLGSVLARPAPPSGLPSATSGISSTVSPRDTATR*DXXXXXXXXXXXXXXXXXXXXXETFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSERG 557 +E + +P+GV++ I+ + V+GP+G+L+RDFS + I + G + + + A + + + + I + ++ R E FLGEK R ++ GVTV + KD++I++G DIE V ++AA I+Q VK+ D R F+DGIY+ E+G Sbjct: 8 AEEVRVPEGVEVSIDGLKVTVKGPKGELTRDFSHARNIVIRLDEDEEGK---KVVVEAYFANRRVKALVGTIAAHIENMITGVTKGFRYKLKIVYSHFPVTVKVQGDKVVIENFLGEKAPRIAKIMPGVTV---KVQKDDVIVEGIDIEAVGQTAANIEQATKVKDKDRRVFIDGIYIYEKG 183
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_METBF (50S ribosomal protein L6P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl6p PE=3 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 2.716e-12 Identity = 24/66 (36.36%), Postives = 40/66 (60.61%), Query Frame = 2 Query: 161 KLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358 ++++DA ++ A + T SH+ NL+ GV +G+ KM +YAHFP+ + K++ I NFLG Sbjct: 51 EVEVDAESSRKEQKAMVGTFTSHIKNLMKGVNEGFECKMTILYAHFPMQVKVD--GKTLIIGNFLG 114 HSP 2 Score: 41.9726 bits (97), Expect = 2.716e-12 Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 3 Query: 351 FLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554 FLGEKK R +L G T V+ +E+ + G + E V ++AA I+QK +K D R F DGIY+ ++ Sbjct: 112 FLGEKKPRIAKIL-GETKVKVSG--NEVTVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 176
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_STAMF (50S ribosomal protein L6P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl6p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12 Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 2 Query: 161 KLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358 K+ ++ +F R+ A + T SH+ N+I GV KGYRYK++ +Y+HFPI + + N+ + I+NFLG Sbjct: 53 KIIVETFFADRRKKALVGTIASHIENMIKGVLKGYRYKLKIIYSHFPITVEVDDRNRIVRIKNFLG 118
BLAST of EY736341 vs. ExPASy Swiss-Prot
Match: RL6_ARCFU (50S ribosomal protein L6P OS=Archaeoglobus fulgidus GN=rpl6p PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 5.917e-12 Identity = 25/71 (35.21%), Postives = 38/71 (53.52%), Query Frame = 2 Query: 146 ETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLG 358 E G K+++ +K A + T H+ NLI GV +G+ Y ++ VYAHFPI + + I NF+G Sbjct: 65 EVGDGKVRVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIKVRV--EGNEVIIENFIG 133 HSP 2 Score: 39.6614 bits (91), Expect = 5.917e-12 Identity = 23/70 (32.86%), Postives = 39/70 (55.71%), Query Frame = 3 Query: 345 ETFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALIDQKCHVKNXDIRKFLDGIYVSER 554 E F+GEK R+ ++ V S + ++ + G DIE ++AA ++Q +K D R F DGIY+ ++ Sbjct: 129 ENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195 The following BLAST results are available for this feature:
BLAST of EY736341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736341 ID=EY736341; Name=EY736341; organism=Citrus sinensis; type=EST; length=895bpback to top |