EY736339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736339 vs. ExPASy Swiss-Prot
Match: ATPB_THAPS (ATP synthase subunit beta, chloroplastic OS=Thalassiosira pseudonana GN=atpB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 6.930e-33 Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI A+SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 201 ESGVIN-SSNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 290
BLAST of EY736339 vs. ExPASy Swiss-Prot
Match: ATPB_MOOTA (ATP synthase subunit beta OS=Moorella thermoacetica (strain ATCC 39073) GN=atpD PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.050e-33 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV++ K ALV+GQMNEPPGAR RVGLTGLT+AE+FRDAEGQDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 196 ESGVLE--------KTALVFGQMNEPPGARLRVGLTGLTMAEYFRDAEGQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG 278
BLAST of EY736339 vs. ExPASy Swiss-Prot
Match: ATPB_BRASO (ATP synthase subunit beta OS=Bradyrhizobium sp. (strain ORS278) GN=atpD PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.050e-33 Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 3 Query: 27 DKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 D SKCALV+GQMNEPPGARARV LTGLT+AE FRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 211 DPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRD-KGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 292
BLAST of EY736339 vs. ExPASy Swiss-Prot
Match: ATPB_BRAJA (ATP synthase subunit beta OS=Bradyrhizobium japonicum GN=atpD PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.050e-33 Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 3 Query: 27 DKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 D SKCALV+GQMNEPPGARARV LTGLT+AE FRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 208 DPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRD-KGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 289
BLAST of EY736339 vs. ExPASy Swiss-Prot
Match: ATPB1_BRASB (ATP synthase subunit beta 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=atpD1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.050e-33 Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 3 Query: 27 DKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 D SKCALV+GQMNEPPGARARV LTGLT+AE FRD +GQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 211 DPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRD-KGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 292
BLAST of EY736339 vs. ExPASy Swiss-Prot
Match: ATPB_DESPS (ATP synthase subunit beta OS=Desulfotalea psychrophila GN=atpD PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.182e-32 Identity = 72/91 (79.12%), Postives = 75/91 (82.42%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGV+ K ALVYGQM EPPGARARV LTGLT AE+FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATDLG Sbjct: 204 ESGVLP--------KAALVYGQMTEPPGARARVALTGLTAAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDLG 286
BLAST of EY736339 vs. ExPASy Swiss-Prot
Match: ATPB_SPHWW (ATP synthase subunit beta OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpD PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.544e-32 Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 3 Query: 42 SKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 SK ALV+GQMNEPPGARARV L+GLT+AE+FRD EGQDVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTL+TD+G Sbjct: 219 SKVALVFGQMNEPPGARARVALSGLTIAEYFRDVEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMG 296
BLAST of EY736339 vs. ExPASy Swiss-Prot
Match: ATPB_ROSDO (ATP synthase subunit beta OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpD PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.544e-32 Identity = 71/91 (78.02%), Postives = 76/91 (83.52%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ES VI + D +SK ALVYGQMNEPPGAR RV LTGLT+AE FRD G DVL F+DNIFRFTQA SEVSALLGRIPSAVGYQPTLATD+G Sbjct: 197 ESSVI-VPDNLTESKVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 286
BLAST of EY736339 vs. ExPASy Swiss-Prot
Match: ATPB_PSEAK (ATP synthase subunit beta, chloroplastic OS=Pseudendoclonium akinetum GN=atpB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.544e-32 Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = 3 Query: 3 ESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGG 278 ESGVI+ + A SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRF QA SEVSALLGR+PSAVGYQPTLAT++GG Sbjct: 209 ESGVIQEKNMSA-SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGG 299
BLAST of EY736339 vs. ExPASy Swiss-Prot
Match: ATPB_PHATR (ATP synthase subunit beta, chloroplastic OS=Phaeodactylum tricornutum GN=atpB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.544e-32 Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 3 Query: 3 ESGVIKLGDKQ-ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLG 275 ESGVI +K A+SK ALVYGQMNEPPGAR RVGLT LT+AE+FRD QDVLLFIDNIFRFTQA SEVSALLGR+PSAVGYQPTLAT++G Sbjct: 202 ESGVIN--EKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMG 291 The following BLAST results are available for this feature:
BLAST of EY736339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736339 ID=EY736339; Name=EY736339; organism=Citrus sinensis; type=EST; length=280bpback to top |