EY736336

Overview
NameEY736336
Unique NameEY736336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length333
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTB_ENTS8 (Multidrug resistance protein mdtB OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mdtB PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.912e-32
Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 3
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+  A+++N+QRQPGAN+I   + I+ LLP +T++LP  + V VLTDRT  I ASV D Q EL++AIALVVM+ +LFLR   ATIIP++AVPLSLVGTF
Sbjct:  275 AENAWLGAWANKQPAIVMNVQRQPGANIITTAETIQKLLPQLTESLPKSVQVKVLTDRTTNISASVNDTQFELMLAIALVVMIIYLFLRNIPATIIPAVAVPLSLVGTF 383          
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_YERE8 (Multidrug resistance protein mdtC OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mdtC PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.142e-25
Identity = 54/108 (50.00%), Postives = 82/108 (75.93%), Query Frame = 3
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A  ++   AVLL I R+PGAN+I  VDRI+A LP++  ++PA +++ +  DR+ TIRAS+ +V+  L+IA+ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMSDGKPAVLLVISREPGANIIATVDRIRAELPALRASIPASIELNIAQDRSPTIRASLDEVERSLVIAVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374          
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_ENTS8 (Multidrug resistance protein mdtC OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mdtC PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.194e-24
Identity = 53/108 (49.07%), Postives = 78/108 (72.22%), Query Frame = 3
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+IE VDRI+A LP + D +PA +D+ +  DR+ TIRAS+ +V+  L I++ LV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIETVDRIRAALPELRDTIPAAIDMQIAQDRSPTIRASLAEVEQSLAISVGLVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374          
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_SERP5 (Multidrug resistance protein mdtC OS=Serratia proteamaculans (strain 568) GN=mdtC PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.559e-24
Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A++L I R P AN+IE VDRI+A LP++ +N+PA + + +  DR+ TIRAS+ +V+  L+IAI LV++V F+FLR   AT+IP++AVP+SL+G+F
Sbjct:  267 QDVRNAGMTNAKPAIILTISRAPDANIIETVDRIRAELPTLQNNIPASIQLNIAQDRSPTIRASLAEVEQSLVIAIGLVILVVFIFLRSGRATLIPAVAVPVSLIGSF 374          
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_ERWCT (Multidrug resistance protein mdtC OS=Erwinia carotovora subsp. atroseptica GN=mdtC PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.559e-24
Identity = 54/108 (50.00%), Postives = 78/108 (72.22%), Query Frame = 3
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            +N R A  AN   A+L+ I+R P AN+I  VD I+A +P +  +LPA + + V  DR+ TIRAS+ +V+  L+IA+ALV++V FLFLR + AT IP++AVP+SL+GTF
Sbjct:  267 QNSRNAGMANSKPAILVMIRRAPDANIITTVDNIRAAMPELRASLPAEIQLDVAQDRSPTIRASLAEVEQSLIIAVALVILVVFLFLRSWRATAIPALAVPVSLIGTF 374          
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_SHIFL (Multidrug resistance protein mdtC OS=Shigella flexneri GN=mdtC PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24
Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374          
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_SHIF8 (Multidrug resistance protein mdtC OS=Shigella flexneri serotype 5b (strain 8401) GN=mdtC PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24
Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374          
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_SHIBS (Multidrug resistance protein mdtC OS=Shigella boydii serotype 4 (strain Sb227) GN=mdtC PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24
Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374          
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_SHIB3 (Multidrug resistance protein mdtC OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=mdtC PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24
Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374          
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_ESCF3 (Multidrug resistance protein mdtC OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=mdtC PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24
Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374          
The following BLAST results are available for this feature:
BLAST of EY736336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
MDTB_ENTS85.912e-3260.55Multidrug resistance protein mdtB OS=Enterobacter ... [more]
MDTC_YERE89.142e-2550.00Multidrug resistance protein mdtC OS=Yersinia ente... [more]
MDTC_ENTS81.194e-2449.07Multidrug resistance protein mdtC OS=Enterobacter ... [more]
MDTC_SERP51.559e-2448.15Multidrug resistance protein mdtC OS=Serratia prot... [more]
MDTC_ERWCT1.559e-2450.00Multidrug resistance protein mdtC OS=Erwinia carot... [more]
MDTC_SHIFL3.474e-2448.15Multidrug resistance protein mdtC OS=Shigella flex... [more]
MDTC_SHIF83.474e-2448.15Multidrug resistance protein mdtC OS=Shigella flex... [more]
MDTC_SHIBS3.474e-2448.15Multidrug resistance protein mdtC OS=Shigella boyd... [more]
MDTC_SHIB33.474e-2448.15Multidrug resistance protein mdtC OS=Shigella boyd... [more]
MDTC_ESCF33.474e-2448.15Multidrug resistance protein mdtC OS=Escherichia f... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-A04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736336 ID=EY736336; Name=EY736336; organism=Citrus sinensis; type=EST; length=333bp
GAGCCGAGAACGAACGCCTCGCGGCCTGGGCCAATGAAAACCAGGCGGTC
TTGCTGAACATTCAGCGCCAGCCCGGGGCCAACGTCATCGAAGTGGTGGA
CCGGATCAAGGCATTGTTGCCGAGCATCACCGACAACCTGCCGGCCGGCC
TGGACGTGACGGTGCTCACTGACCGGACCCAGACCATCCGGGCCTCGGTC
AAGGACGTACAACACGAATTGCTGATCGCCATTGCCCTGGTGGTGATGGT
GACGTTCCTGTTCCTGCGCCGCTTCAGCGCGACCATCATCCCGTCCATTG
CCGTGCCACTGTCCCTGGTGGGCACCTTTGGCG
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