EY736336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTB_ENTS8 (Multidrug resistance protein mdtB OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mdtB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.912e-32 Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 3 Query: 3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 AEN L AWAN+ A+++N+QRQPGAN+I + I+ LLP +T++LP + V VLTDRT I ASV D Q EL++AIALVVM+ +LFLR ATIIP++AVPLSLVGTF Sbjct: 275 AENAWLGAWANKQPAIVMNVQRQPGANIITTAETIQKLLPQLTESLPKSVQVKVLTDRTTNISASVNDTQFELMLAIALVVMIIYLFLRNIPATIIPAVAVPLSLVGTF 383
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_YERE8 (Multidrug resistance protein mdtC OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mdtC PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.142e-25 Identity = 54/108 (50.00%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A ++ AVLL I R+PGAN+I VDRI+A LP++ ++PA +++ + DR+ TIRAS+ +V+ L+IA+ALV++V FLFLR AT+IP++AVP+SL+GTF Sbjct: 267 QDVRNAGMSDGKPAVLLVISREPGANIIATVDRIRAELPALRASIPASIELNIAQDRSPTIRASLDEVERSLVIAVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_ENTS8 (Multidrug resistance protein mdtC OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mdtC PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.194e-24 Identity = 53/108 (49.07%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+IE VDRI+A LP + D +PA +D+ + DR+ TIRAS+ +V+ L I++ LV++V FLFLR AT+IP++AVP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIETVDRIRAALPELRDTIPAAIDMQIAQDRSPTIRASLAEVEQSLAISVGLVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_SERP5 (Multidrug resistance protein mdtC OS=Serratia proteamaculans (strain 568) GN=mdtC PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.559e-24 Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A++L I R P AN+IE VDRI+A LP++ +N+PA + + + DR+ TIRAS+ +V+ L+IAI LV++V F+FLR AT+IP++AVP+SL+G+F Sbjct: 267 QDVRNAGMTNAKPAIILTISRAPDANIIETVDRIRAELPTLQNNIPASIQLNIAQDRSPTIRASLAEVEQSLVIAIGLVILVVFIFLRSGRATLIPAVAVPVSLIGSF 374
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_ERWCT (Multidrug resistance protein mdtC OS=Erwinia carotovora subsp. atroseptica GN=mdtC PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.559e-24 Identity = 54/108 (50.00%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 +N R A AN A+L+ I+R P AN+I VD I+A +P + +LPA + + V DR+ TIRAS+ +V+ L+IA+ALV++V FLFLR + AT IP++AVP+SL+GTF Sbjct: 267 QNSRNAGMANSKPAILVMIRRAPDANIITTVDNIRAAMPELRASLPAEIQLDVAQDRSPTIRASLAEVEQSLIIAVALVILVVFLFLRSWRATAIPALAVPVSLIGTF 374
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_SHIFL (Multidrug resistance protein mdtC OS=Shigella flexneri GN=mdtC PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24 Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP++AVP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_SHIF8 (Multidrug resistance protein mdtC OS=Shigella flexneri serotype 5b (strain 8401) GN=mdtC PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24 Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP++AVP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_SHIBS (Multidrug resistance protein mdtC OS=Shigella boydii serotype 4 (strain Sb227) GN=mdtC PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24 Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP++AVP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_SHIB3 (Multidrug resistance protein mdtC OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=mdtC PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24 Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP++AVP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
BLAST of EY736336 vs. ExPASy Swiss-Prot
Match: MDTC_ESCF3 (Multidrug resistance protein mdtC OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=mdtC PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.474e-24 Identity = 52/108 (48.15%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP++AVP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374 The following BLAST results are available for this feature:
BLAST of EY736336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736336 ID=EY736336; Name=EY736336; organism=Citrus sinensis; type=EST; length=333bpback to top |