EY736192

Overview
NameEY736192
Unique NameEY736192
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736192 vs. ExPASy Swiss-Prot
Match: CH60_HELPY (60 kDa chaperonin OS=Helicobacter pylori GN=groL PE=3 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 2.255e-62
Identity = 120/221 (54.30%), Postives = 161/221 (72.85%), Query Frame = 3
Query:   24 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTATKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSQKLAERIAKLSGG 686
            D  IG +IADA++KVG DGV+                GM+ DRGY+SP FVTN EK+  + +NA +L+TD+KIS++KDI+PLLEKT +   PLLIIAED+ GEAL TLVVNKLRG+LN+AA+KAPGFG+RRK +L+DIAI+TG +  + +LGL +EN  VE LG A ++ I KD+TTI+       +++ R+AQ+K ++A T S YD +KL ER+AKLSGG
Sbjct:  154 DHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVISEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGG 374          
BLAST of EY736192 vs. ExPASy Swiss-Prot
Match: CH60_HELPS (60 kDa chaperonin OS=Helicobacter pylori (strain Shi470) GN=groL PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.255e-62
Identity = 119/221 (53.85%), Postives = 161/221 (72.85%), Query Frame = 3
Query:   24 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTATKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSQKLAERIAKLSGG 686
            D  IG +IADA++KVG DGV+                GM+ DRGY+SP FVTN EK+  + +NA +L+TD+KIS++KDI+PLLEKT +   PLLIIAED+ GEAL TLVVNKLRG+LN+AA+KAPGFG+RRK +L+DIA++TG +  + +LGL +EN  VE LG A ++ I KD+TTI+       +++ R+AQ+K ++A T S YD +KL ER+AKLSGG
Sbjct:  154 DHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVISEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGG 374          
BLAST of EY736192 vs. ExPASy Swiss-Prot
Match: CH60_HELAH (60 kDa chaperonin OS=Helicobacter acinonychis (strain Sheeba) GN=groL PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.255e-62
Identity = 119/221 (53.85%), Postives = 161/221 (72.85%), Query Frame = 3
Query:   24 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTATKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSQKLAERIAKLSGG 686
            D  IG +IADA++KVG DGV+                GM+ DRGY+SP FVTN EK+  + +NA +L+TD+KIS++KDI+PLLEKT +   PLLIIAED+ GEAL TLVVNKLRG+LN+AA+KAPGFG+RRK +L+DIA++TG +  + +LGL +EN  VE LG A ++ I KD+TTI+       +++ R+AQ+K ++A T S YD +KL ER+AKLSGG
Sbjct:  154 DHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVISEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYDKEKLQERLAKLSGG 374          
BLAST of EY736192 vs. ExPASy Swiss-Prot
Match: CH60_CAMC1 (60 kDa chaperonin OS=Campylobacter concisus (strain 13826) GN=groL PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.255e-62
Identity = 119/221 (53.85%), Postives = 161/221 (72.85%), Query Frame = 3
Query:   24 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTATKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSQKLAERIAKLSGG 686
            D+ IG +IADA++KVG DGV+                GM+ DRGY+SP F+TNPEK+ VE  N  +L+ D+KI+ +KD++P+LE+  +   PLLIIAED+ GEALATLVVNKLRG+LN++A+KAPGFG+RRKA+L+DIAI+TG E  + +LG  +E+ ++  LG A+ V I KD+TTI+  A  K  I ARI Q+K ++AET S YD +KL ER+AKLSGG
Sbjct:  154 DESIGKLIADAMEKVGKDGVITVEEAKSIQDELSVVEGMQFDRGYLSPYFITNPEKMQVELSNPFILLFDKKITNLKDLLPVLEQVQKSGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGEVISEELGRTLESATINDLGQASSVVIDKDNTTIVNGAGEKSAIDARITQIKAQIAETTSDYDKEKLQERLAKLSGG 374          
BLAST of EY736192 vs. ExPASy Swiss-Prot
Match: CH60_ODOSI (60 kDa chaperonin, chloroplastic OS=Odontella sinensis GN=groL PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 2.981e-62
Identity = 107/222 (48.20%), Postives = 159/222 (71.62%), Query Frame = 3
Query:   24 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIK-DIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTATKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSQKLAERIAKLSGG 686
            D+LIG++IADA+ KVG +GV+                GM++++G+ISP F+TN EK+ V +EN  +L+TD++I+ ++ D++P+LE+ T+ + PLL+IAEDV  EALATL++NKLRGI+NV A++APGFGE RK +L+DIA++TG      D GL +EN  V  LG A ++ + KDSTTI+ D    ++I+AR  QL+K++   D+ Y+ +KL +RIAKLSGG
Sbjct:  154 DNLIGSLIADALSKVGKEGVISLEEGKGIITELEITEGMKLEKGFISPYFITNTEKMEVSYENPFILLTDKRITLVQQDLLPILEQITKTKRPLLLIAEDVEKEALATLILNKLRGIVNVVAVRAPGFGELRKQMLEDIAVLTGGTVITQDAGLSLENIQVNLLGQARRIIVNKDSTTIVGDGLEIEQIKARCEQLRKQVNIADTGYEKEKLQDRIAKLSGG 375          

HSP 2 Score: 43.5134 bits (101), Expect = 2.981e-62
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 1
Query:  685 GVAGINVGPGPKTDLEDR*LPFEDATNAPVAPLEEGLSPAGGAGPRPLPDHL 840
            G+A I VG   +T+++D+ L  EDA NA  A +EEG+ P GGA    L ++L
Sbjct:  375 GIAVIRVGAVTETEMKDKKLRLEDAINATRAAVEEGIVPGGGATLAHLAENL 426          
BLAST of EY736192 vs. ExPASy Swiss-Prot
Match: CH601_MOOTA (60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL1 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.847e-62
Identity = 120/218 (55.05%), Postives = 155/218 (71.10%), Query Frame = 3
Query:   33 IGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTATKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSQKLAERIAKLSGG 686
            IG +IADA++KVG DGV+                GME DRGY+SP FVTN E +  EFE   +L+ ++KISAI D++PLLEK  +   PL+IIAED+ GEALATLVVNKLRG LN AA+KAPGFG+RRKA+++DIAI+TG  F + DLG+ +EN  +  LG A KV I K+ TTI+     K+ +  RIAQ+KK++ ETDS YD +KL ER+AKL+GG
Sbjct:  157 IGELIADAMEKVGKDGVITVEESKGTATTVEVVEGMEFDRGYVSPYFVTNTEAMEAEFEEPYILIHEKKISAINDLLPLLEKVVRTGKPLVIIAEDIEGEALATLVVNKLRGTLNCAAVKAPGFGDRRKAMMEDIAILTGGTFLSEDLGVKLENVDLNMLGRAKKVKIAKEKTTIVEGYGKKEAVDGRIAQIKKQIEETDSDYDREKLQERLAKLAGG 374          
BLAST of EY736192 vs. ExPASy Swiss-Prot
Match: CH60_HALHL (60 kDa chaperonin OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=groL PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.886e-62
Identity = 113/221 (51.13%), Postives = 156/221 (70.59%), Query Frame = 3
Query:   24 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTATKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSQKLAERIAKLSGG 686
            D+ +G +IADA+ KVG +GV+                GM+ DRGY+SP FVT+ + +  E E+A +L+ D+KIS I+D++PLLE   +   PLLIIAE+V GEALATLVVN LRGI+ VAA+KAPGFG+RRKA+LQDIAI+TG    + ++G+ +EN +V+ LGTA KV I K+ TTI+  A   D+I AR+ Q++ ++ E+ S YD +KL ER+AKL GG
Sbjct:  156 DEAVGRIIADAMGKVGKEGVITVEEGSGLDNELDVVEGMQFDRGYLSPYFVTDQQTMKAELEDAAILLHDKKISNIRDLLPLLEGVAKQNRPLLIIAEEVEGEALATLVVNNLRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISDEVGMTLENATVDDLGTAKKVQISKEETTIVGGAGRHDDIMARVEQIRAQMEESTSDYDKEKLQERVAKLVGG 376          

HSP 2 Score: 35.4242 bits (80), Expect = 3.886e-62
Identity = 17/44 (38.64%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  679 LAGVAGINVGPGPKTDLEDR*LPFEDATNAPVAPLEEGLSPAGG 810
            + GVA I VG   + +++++    EDA +A  A +EEG+ P GG
Sbjct:  374 VGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGG 417          
BLAST of EY736192 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.562e-62
Identity = 113/221 (51.13%), Postives = 161/221 (72.85%), Query Frame = 3
Query:   24 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTATKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSQKLAERIAKLSGG 686
            D  +G MIA A+D VG DGV+                GM+ DRGYISP FVT+ E+++ E+ENA +L+T  K+S ++D++P+LE+  +   PLL+IAEDV GEALATLVVNKLRG+LN  A+KAP FG+RRKA+L+DIAI+TG +  + D+G+ +EN +++ +G A K+T+ KD TTI+ D ++K  ++ R+AQ++K+L  TDS YD +KL ERIAKL+GG
Sbjct:  154 DPEVGEMIARAMDAVGRDGVITVEESKSLETQLEVVEGMQFDRGYISPYFVTDTERMVAEYENAYLLITSNKLSNLQDLVPVLERVAREGRPLLVIAEDVEGEALATLVVNKLRGVLNAVAVKAPAFGDRRKAMLEDIAILTGGQLISEDIGIKLENVTLDMMGVARKITVTKDKTTIVTDGSTKAAVEKRVAQIRKQLETTDSEYDREKLQERIAKLAGG 374          
BLAST of EY736192 vs. ExPASy Swiss-Prot
Match: CH60_THEYD (60 kDa chaperonin OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=groL PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 8.571e-62
Identity = 123/221 (55.66%), Postives = 159/221 (71.95%), Query Frame = 3
Query:   24 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTATKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSQKLAERIAKLSGG 686
            D  IG +IA+A+DKVG DGV+                GM+ DRGYISP F+T+PE+L    E+A VL+ D+KIS +KD++P+LE+  ++  PLLIIAEDV GEALATLVVNKLRG+L V A+KAPGFGERRKA+L+DIAI+TG    + D+GL +EN  VE LG A K+ I KD+TTI+  A    +IQARI Q+K ++ ET S YD +KL ER+AKL+GG
Sbjct:  155 DVSIGELIAEAMDKVGKDGVITVEEAKGMATTLDIVEGMQFDRGYISPYFITDPERLECILEDAFVLIHDKKISTMKDLLPILEQIARMGRPLLIIAEDVEGEALATLVVNKLRGVLQVCAVKAPGFGERRKAMLEDIAILTGGTVISEDIGLKLENVKVEDLGKAKKIIIDKDNTTIVEGAGDPQKIQARIKQIKVQIDETTSDYDREKLQERLAKLAGG 375          
BLAST of EY736192 vs. ExPASy Swiss-Prot
Match: CH60_CAMLR (60 kDa chaperonin OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=groL PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 8.571e-62
Identity = 118/221 (53.39%), Postives = 161/221 (72.85%), Query Frame = 3
Query:   24 DDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTATKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSQKLAERIAKLSGG 686
            D+ IG +IADA++KVG DGV+                GM+ DRGY+SP F+TN EK+  E +N  +L+ D+KI+ +KD++P+LE+  +   PLLIIAED+ GEALATLVVNKLRG+LN++A+KAPGFG+RRKA+L+DIAI+TG E  + +LG  +E+ S++ LG A+ V I KD+TTI+  A  K  I ARI Q+K ++AET S YD +KL ER+AKLSGG
Sbjct:  154 DEKIGNLIADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNTEKMTAELQNPFILLFDKKIANLKDLLPILEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVKAPGFGDRRKAMLEDIAILTGGEVISEELGRTLESASIQDLGQASSVIIDKDNTTIVNGAGEKANINARINQIKAQIAETSSDYDREKLQERLAKLSGG 374          
The following BLAST results are available for this feature:
BLAST of EY736192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_HELPY2.255e-6254.3060 kDa chaperonin OS=Helicobacter pylori GN=groL P... [more]
CH60_HELPS2.255e-6253.8560 kDa chaperonin OS=Helicobacter pylori (strain S... [more]
CH60_HELAH2.255e-6253.8560 kDa chaperonin OS=Helicobacter acinonychis (str... [more]
CH60_CAMC12.255e-6253.8560 kDa chaperonin OS=Campylobacter concisus (strai... [more]
CH60_ODOSI2.981e-6248.2060 kDa chaperonin, chloroplastic OS=Odontella sine... [more]
CH601_MOOTA3.847e-6255.0560 kDa chaperonin 1 OS=Moorella thermoacetica (str... [more]
CH60_HALHL3.886e-6251.1360 kDa chaperonin OS=Halorhodospira halophila (str... [more]
CH601_SYNJA6.562e-6251.1360 kDa chaperonin 1 OS=Synechococcus sp. (strain J... [more]
CH60_THEYD8.571e-6255.6660 kDa chaperonin OS=Thermodesulfovibrio yellowsto... [more]
CH60_CAMLR8.571e-6253.3960 kDa chaperonin OS=Campylobacter lari (strain RM... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-A11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736192 ID=EY736192; Name=EY736192; organism=Citrus sinensis; type=EST; length=859bp
CCACGCGTCCGCCCACGCGTCCGGATGACCTGATTGGGACAATGATCGCC
GATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCATC
ATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGACA
GGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTGTT
GAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCAAT
AAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACCAT
TGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAGTC
GTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCTGG
TTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGACTG
GAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTTCA
GTTGAGCAGCTAGGTACAGCTACAAAGGTGACCATCAGAAAGGACTCCAC
TACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTG
CACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCACAG
AAACTTGCTGAGAGAATCGCTAAATTGTCTGGCGGGGGTTGCTGGTATTA
ACGTCGGACCTGGCCCAAAAACTGACCTTGAGGACCGGTAACTCCCCTTT
GAAGATGCCACGAATGCACCTGTTGCACCCCTGGAGGAAGGGCTGTCCCC
TGCTGGGGGCGCGGGTCCGCGTCCTCTGCCTGATCATCTCCCGGCTGCCA
CGGACCGCC
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