EY736163

Overview
NameEY736163
Unique NameEY736163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MRP6_HUMAN (Multidrug resistance-associated protein 6 OS=Homo sapiens GN=ABCC6 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 9.105e-49
Identity = 81/188 (43.09%), Postives = 120/188 (63.83%), Query Frame = 3
Query:   18 PNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            P WP  G ++  D  +RYR   PL ++G++  IH GEK+G+VGRTG+GKS+L     RL E +                   RSR  IIPQ+P+LF G++R N+D + ++SDE IW +LE  QLK +VA+ P +L    AD G++ SVGQ+QLLCL R +L+ +++L +DEATA+VD  T+ ++Q ++
Sbjct: 1257 PPWPQGGQIEFRDFGLRYRPELPLAVQGVSFKIHAGEKVGIVGRTGAGKSSLASGLLRLQEAAEGGIWIDGVPIAHVGLHTLRSRISIIPQDPILFPGSLRMNLDLLQEHSDEAIWAALETVQLKALVASLPGQLQYKCADRGEDLSVGQKQLLCLARALLRKTQILILDEATAAVDPGTELQMQAML 1444          

HSP 2 Score: 47.7506 bits (112), Expect = 9.105e-49
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 1
Query:  595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSL 726
            A CT++ IAHR+ +VMDC + +V+D     ESG P+QLL +  L
Sbjct: 1449 AQCTVLLIAHRLRSVMDCARVLVMDKGQVAESGSPAQLLAQKGL 1492          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MRP9_RAT (Multidrug resistance-associated protein 9 OS=Rattus norvegicus GN=Abcc12 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.493e-48
Identity = 92/211 (43.60%), Postives = 139/211 (65.88%), Query Frame = 3
Query:   15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647
            P +WP+ G +   D ++RYR NTPLVL G+ L+I  G+ +G+VGRTGSGKS+L    FRLVEP+                   R++  +IPQ+PVLF GTVR N+DP+G ++DE +W  LER  ++D +   P+KL + V ++G+N+SVG+RQLLC+ R +L++S+++ +DEATAS+DS+TD  +Q  I+E       ++ C+  T +H L
Sbjct: 1118 PKDWPSRGEITFKDYRMRYRDNTPLVLDGLNLNIQSGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICTVGLEELRTKLTMIPQDPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLRNSKIILLDEATASMDSKTDTLVQSTIKEA------FKSCTVLTIAHRL 1322          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MRP9_MOUSE (Multidrug resistance-associated protein 9 OS=Mus musculus GN=Abcc12 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.493e-48
Identity = 92/211 (43.60%), Postives = 139/211 (65.88%), Query Frame = 3
Query:   15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647
            P +WP+ G +   D ++RYR NTPLVL G+ L+I  G+ +G+VGRTGSGKS+L    FRLVEP+                   R++  +IPQ+PVLF GTVR N+DP+G ++DE +W  LER  ++D +   P+KL + V ++G+N+SVG+RQLLC+ R +L++S+++ +DEATAS+DS+TD  +Q  I+E       ++ C+  T +H L
Sbjct: 1118 PKDWPSRGEITFKDYRMRYRDNTPLVLDGLNLNIQSGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIIIDEVDICTVGLEDLRTKLTMIPQDPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLRNSKIILLDEATASMDSKTDTLVQSTIKEA------FKSCTVLTIAHRL 1322          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABC2_SCHPO (ATP-binding cassette transporter abc2 OS=Schizosaccharomyces pombe GN=abc2 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.464e-48
Identity = 94/193 (48.70%), Postives = 117/193 (60.62%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            RPP  WP+HG +      VRYR N PLVL  I+++I   EKIG+VGRTG+GKSTL    FRL+EP+                   RSR  IIPQE   FEGT+R N+DP    +DEEIW +LE   LK  +      L S V + G N S GQRQL+CL R +L  +R+L +DEATA+VD +TDA +QR IRE
Sbjct: 1228 RPPEGWPSHGAIKFDHYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINITSIGLHDLRSRLAIIPQENQAFEGTIRENLDPNANATDEEIWHALEAASLKQFIQTLDGGLYSRVTEGGANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVDVETDAIVQRTIRE 1420          

HSP 2 Score: 33.8834 bits (76), Expect = 4.464e-48
Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLE-KPSLSAASVEE 747
            TI++IAHRI TVMD ++ +V+D     E     +LLE K SL  +  +E
Sbjct: 1426 TILTIAHRINTVMDSNRILVLDHGKVVEFDSTKKLLENKASLFYSLAKE 1474          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MRP2_RAT (Canalicular multispecific organic anion transporter 1 OS=Rattus norvegicus GN=Abcc2 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.553e-48
Identity = 98/213 (46.01%), Postives = 133/213 (62.44%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647
            RPP +WP HG +   + QVRYR    LVLKGIT +I  GEK+GVVGRTG+GKS+L    FR++E +                   R R  IIPQ+P+LF G++R N+DP  +YSDEE+W++LE   L+  V+     L S V + GDN S+GQRQLLCLGR +L+ S++L +DEATA+VD +TD+ IQ  IR+       +  C+  T +H L
Sbjct: 1285 RPPADWPRHGEIQFNNYQVRYRPELDLVLKGITCNIKSGEKVGVVGRTGAGKSSLTNCLFRILESAGGQIIIDGIDVASIGLHDLRERLTIIPQDPILFSGSLRMNLDPFNKYSDEEVWRALELAHLRSFVSGLQLGLLSEVTEGGDNLSIGQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRK------EFSQCTVITIAHRL 1491          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: YCFI_YEAST (Metal resistance protein YCF1 OS=Saccharomyces cerevisiae GN=YCF1 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.288e-47
Identity = 90/193 (46.63%), Postives = 119/193 (61.66%), Query Frame = 3
Query:    9 RPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR 584
            RPP  WP+ G++   +   RYR    LVLK I + I   EK+G+VGRTG+GKS+L    FR++E S                   R +  IIPQ+  +FEGTVR NIDPI QY+DE IW++LE   LK+ V++   D LD+ + + G N SVGQRQLLCL R ML  S++L +DEATA+VD +TD  +Q  IR
Sbjct: 1261 RPPKEWPSQGDIKFNNYSTRYRPELDLVLKHINIHIKPNEKVGIVGRTGAGKSSLTLALFRMIEASEGNIVIDNIAINEIGLYDLRHKLSIIPQDSQVFEGTVRENIDPINQYTDEAIWRALELSHLKEHVLSMSNDGLDAQLTEGGGNLSVGQRQLLCLARAMLVPSKILVLDEATAAVDVETDKVVQETIR 1453          

HSP 2 Score: 38.1206 bits (87), Expect = 1.288e-47
Identity = 18/36 (50.00%), Postives = 24/36 (66.67%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLL 711
            TI++IAHR+ T+MD D+ IV+D     E   P QLL
Sbjct: 1460 TILTIAHRLNTIMDSDRIIVLDNGKVAEFDSPGQLL 1495          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC8_DICDI (ABC transporter C family member 8 OS=Dictyostelium discoideum GN=abcC8 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.186e-47
Identity = 86/190 (45.26%), Postives = 117/190 (61.58%), Query Frame = 3
Query:   15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR 584
            P +WP+HG +   +L + YR     VL+GI  +I    K+G+VGRTG+GKS+L Q  FRLVEP                    RSR  IIPQ+PVLF G+VR N+DP  QY D EIW+++E   L   +      LD++V D GDN+SVGQRQLL +GR +LK + ++ +DEA++S+D  +DA IQ  IR
Sbjct: 1335 PMSWPSHGKIVFKNLWLTYREGLDPVLRGINCTIEPKTKVGIVGRTGAGKSSLTQALFRLVEPLRGTIEIDGIDITELGLNPLRSRMAIIPQDPVLFAGSVRYNLDPFDQYDDHEIWEAIENAHLLKAIKDLDGGLDAMVQDGGDNFSVGQRQLLVIGRALLKKANIIVLDEASSSIDIASDALIQETIR 1524          

HSP 2 Score: 39.6614 bits (91), Expect = 2.186e-47
Identity = 18/40 (45.00%), Postives = 27/40 (67.50%), Query Frame = 1
Query:  595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLE 714
            A CT+++IAHR+ T+ D DK +V+D     E   PS+LL+
Sbjct: 1528 ADCTVLTIAHRLGTIADSDKIMVLDKGELIEYDSPSELLK 1567          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MRP9_HUMAN (Multidrug resistance-associated protein 9 OS=Homo sapiens GN=ABCC12 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 6.139e-47
Identity = 90/211 (42.65%), Postives = 137/211 (64.93%), Query Frame = 3
Query:   15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647
            P +WP+ G +   D Q+RYR NTPLVL  + L+I  G+ +G+VGRTGSGKS+L    FRLVEP+                   R++  +IPQ+PVLF GTVR N+DP   ++DE +W+ LER  ++D +   P+KL + V ++G+N+SVG+RQLLC+ R +L++S+++ +DEATAS+DS+TD  +Q  I++       ++ C+  T +H L
Sbjct: 1111 PKDWPSRGEITFRDYQMRYRDNTPLVLDSLNLNIQSGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICILSLEDLRTKLTVIPQDPVLFVGTVRYNLDPFESHTDEMLWQVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCVARALLRNSKIILLDEATASMDSKTDTLVQNTIKDA------FKGCTVLTIAHRL 1315          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MRP6_MOUSE (Multidrug resistance-associated protein 6 OS=Mus musculus GN=Abcc6 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.310e-47
Identity = 80/185 (43.24%), Postives = 115/185 (62.16%), Query Frame = 3
Query:   18 PNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            P WP  G ++  D  +R+R   PL ++G++L IH GEK+G+VGRTG+GKS+L     RL E +                   RSR  IIPQ+PVLF G++R N+D + +++DE IW +LE  QLK  V + P +L    A  GD+ SVG +QLLCL R +L+ +++L +DEATASVD  T+ ++Q
Sbjct: 1252 PLWPCGGQIEFRDFGLRHRPELPLAVQGVSLKIHAGEKVGIVGRTGAGKSSLAWGLLRLQEAAEGNIWIDGVPITHVGLHTLRSRITIIPQDPVLFPGSLRMNLDLLQEHTDEGIWAALETVQLKAFVTSLPGQLQYECAGQGDDLSVGHKQLLCLARALLRKTQILILDEATASVDPGTEMQMQ 1436          

HSP 2 Score: 49.6766 bits (117), Expect = 6.310e-47
Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 1
Query:  562 LKFKGSFERESAACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSL 726
            ++ + + ER    CT++ IAHR+ +VMDC + +V+D     ESG P+QLL +  L
Sbjct: 1433 MQMQAALERWFTQCTLLLIAHRLRSVMDCARVLVMDEGQVAESGNPAQLLAQKGL 1487          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MRP1_CANFA (Multidrug resistance-associated protein 1 OS=Canis familiaris GN=ABCC1 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.018e-47
Identity = 98/212 (46.23%), Postives = 131/212 (61.79%), Query Frame = 3
Query:   12 PPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647
            PP  WP  G V+  D  +RYR N  LVLK I ++I+GGEK+G+VGRTG+GKS+L    FR+ E +                   R +  IIPQ+PVLF G++R N+DP  QYSDEE+W SLE   LKD V+  PDKL+   A+ G+N SVGQRQL+CL R +L+ +++L +DEATA+VD +TD  IQ  IR        +  C+  T +H L
Sbjct: 1283 PPSTWPQVGRVEFRDYGLRYRENLDLVLKHINITINGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDDINIAKIGLHDLRVKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKDFVSGLPDKLNQECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRT------QFDDCTVLTIAHRL 1488          
The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
MRP6_HUMAN9.105e-4943.09Multidrug resistance-associated protein 6 OS=Homo ... [more]
MRP9_RAT2.493e-4843.60Multidrug resistance-associated protein 9 OS=Rattu... [more]
MRP9_MOUSE2.493e-4843.60Multidrug resistance-associated protein 9 OS=Mus m... [more]
ABC2_SCHPO4.464e-4848.70ATP-binding cassette transporter abc2 OS=Schizosac... [more]
MRP2_RAT5.553e-4846.01Canalicular multispecific organic anion transporte... [more]
YCFI_YEAST1.288e-4746.63Metal resistance protein YCF1 OS=Saccharomyces cer... [more]
ABCC8_DICDI2.186e-4745.26ABC transporter C family member 8 OS=Dictyostelium... [more]
MRP9_HUMAN6.139e-4742.65Multidrug resistance-associated protein 9 OS=Homo ... [more]
MRP6_MOUSE6.310e-4743.24Multidrug resistance-associated protein 6 OS=Mus m... [more]
MRP1_CANFA8.018e-4746.23Multidrug resistance-associated protein 1 OS=Canis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGTCCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTC
ATAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGG
TATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTA
CAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAG
CCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTCATTGTTGGG
GCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCC
TTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCA
GATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGT
AGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACA
ACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGTTATGCTA
AAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTC
ACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGGAGTCTGCTGCC
TGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGATTGTGA
TAAAGCTATAGTCGTTGATGCACGATGGGCGAAAGAATCTGGCGAGCCAT
CCCAGTTGCTTGAAAAGCCATCACTCTCCGCAGCATCGGTGGAAGAATTA
CCCAACCACACCATCAAACTGGACGAACGTATCCCTTGGACTCGATCGCG
GGTCGAACCGACGTTCCGGTGAAGGAAGCCCGTTATATATACAAGTTAGT
GTTCTGTCGCTGGCACAATCCCTT
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