EY736163

Overview
NameEY736163
Unique NameEY736163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_PSESM (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas syringae pv. tomato GN=msbA PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 52/185 (28.11%), Postives = 85/185 (45.95%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD------EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            G++++ +L   Y      VL  I+ S   G+ I +VGR+GSGKSTL  +  R                        R     + Q   LF  ++ +NI     Y D       +I  +      K+ +   P   D+ V ++G   S GQRQ L + R +LK++ LL +DEAT+++D++++  IQ
Sbjct:  351 GHLEVKNLSFFYPQTERQVLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHEMGNILLDGVEINDYRLRNLRKHIAQVNQNVTLFNDSIANNI----AYGDLAGAPRADIEAAAADAYAKEFIDQLPQGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQ 531          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_PSEPK (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas putida (strain KT2440) GN=msbA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 54/185 (29.19%), Postives = 83/185 (44.86%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD------EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            G +++ +L   Y      VL  I+     G+ I +VGR+GSGKSTL  +  R                        R     + Q   LF  TV +NI     Y D       +I  +      K+ V   P   D+ V ++G   S GQRQ L + R +LK++ LL +DEAT+++D++++  IQ
Sbjct:  353 GRLEVRNLSFTYPGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNI----AYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQ 533          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCB9_RAT (ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus GN=Abcb9 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 3.107e-12
Identity = 41/184 (22.28%), Postives = 84/184 (45.65%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPL-VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            G VD  ++   YR+     VL+ ++ S+  G+   +VG +GSGKS+ + +                                ++ QEPVLF  ++  NI   +     E + ++ ++      +    D   +   + G   S GQ+Q + + R ++++  +L +DEAT+++D++++  IQ+ I
Sbjct:  498 GRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGEPIGAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAI 681          

HSP 2 Score: 30.8018 bits (68), Expect = 3.107e-12
Identity = 20/69 (28.99%), Postives = 32/69 (46.38%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKLDERIPWTRSRVEP 810
            T++ IAHR+ TV      +V+D     + G   QLL +  L A  V+      + L+  + +T    EP
Sbjct:  689 TVLIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQ---RQMLGLEHPLDYTAGHKEP 754          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CBIO1_SPIKU (Cobalt import ATP-binding protein cbiO 1 OS=Spiroplasma kunkelii GN=cbiO1 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 4.153e-12
Identity = 45/183 (24.59%), Postives = 83/183 (45.36%), Query Frame = 3
Query:   39 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEP--VLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            ++ L D++ RYR N P  + G++  I+ GE + ++G  GSGKST+ ++   ++ P                    R   GI+ Q P       TVR +I   G  + +   K ++    K   AA    +++ +       S GQ+Q + +   +     ++  DEAT+ +D +   EI++I+
Sbjct:   19 SLKLTDVEFRYRENHPNAVDGVSFEINHGEYVTIIGHNGSGKSTISKIIIGVLRPQKGKIEVFGNEVHSSTITGIRKFLGIVFQNPDNQFIGSTVRDDI-AFGLENRQIPQKKMQAIIEK---AAAKVGMNNFLDHEPLMLSGGQKQRVAIASALALSPDIIIFDEATSMLDPKGRKEIKQIM 197          

HSP 2 Score: 33.113 bits (74), Expect = 4.153e-12
Identity = 16/42 (38.10%), Postives = 27/42 (64.29%), Query Frame = 1
Query:  586 RESAACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLL 711
            +ES   TIISI H +  +++ DKAIV++     + G+P ++L
Sbjct:  201 KESREKTIISITHDMDEILNSDKAIVMNKGQMVKCGKPHEVL 242          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: LCN3_LACLA (Lacticin-481/lactococcin-DR transport/processing ATP-binding protein lcnDR3 OS=Lactococcus lactis subsp. lactis GN=lcnDR3 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.252e-12
Identity = 54/194 (27.84%), Postives = 90/194 (46.39%), Query Frame = 3
Query:   21 NWPAHGNVDLI--DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWK---SLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            N   H N  +I  D+   Y  N   +   I  SI  GEKI +VG++GSGKSTL  +   L+                      R   G++ Q   L +G++  NI       + +I K    L+   + ++V + P K+ S + ++G N S GQ Q L + + +L +++ +F DE  +S+D+Q    I + + E
Sbjct:  455 NIEKHSNNAIILKDISYSYELNN-YIFNNINFSIKKGEKIAIVGKSGSGKSTLFNILLGLIS---------YEGEVTYGYENLRQIIGVVSQNMNLRKGSLIENIVSNNNSEELDIQKINDVLKDVNMLELVDSLPQKIFSQLFENGKNLSGGQIQRLLIAKSLLNNNKFIFWDEPFSSLDNQNRIHIYKNVLE 638          

HSP 2 Score: 20.7866 bits (42), Expect = 5.252e-12
Identity = 8/22 (36.36%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVD 669
            TII I+H +  +   D+ I +D
Sbjct:  646 TIIMISHHLDVLKYVDRVIYID 667          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PHNC1_RHOP5 (Phosphonates import ATP-binding protein phnC 1 OS=Rhodopseudomonas palustris (strain BisA53) GN=phnC1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12
Identity = 63/187 (33.69%), Postives = 88/187 (47.06%), Query Frame = 3
Query:   54 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP---SXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKS-LERCQLKDVVAA----KPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            +L  RY++   L LKG++L I  G+ +G++G +G+GKSTLI+   RLV P   S                   R R G+I QE  L E  TV  N+   G+      W S   R    DV  A        L   V    D  S GQRQ + + R + +   LL +DE TAS+D +T  ++ R+I E
Sbjct:    6 NLDKRYKTGD-LALKGVSLHIGAGDIVGLIGPSGAGKSTLIRCVNRLVPPTGGSIRLGDTELTRLGGADLRRARRRIGMIFQEFALIERLTVMENV-LSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSDQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITE 190          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CYDD_HAEIN (ATP-binding/permease protein cydD OS=Haemophilus influenzae GN=cydD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.849e-12
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 3
Query:   96 KGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLD--SLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            K +   I     + +VG++G+GK++L+ V    + P                    R     + Q P+L +GT++ N+  +G  Q +DEEI ++L R Q K+      DKL     + D G   SVGQ Q L + R +L+   LL +DE TAS+D+Q++  + + + E
Sbjct:  367 KPLNFQIPANHNVALVGQSGAGKTSLMNVILGFL-PYEGSLKINGQELRESNLADWRKHIAWVGQNPLLLQGTIKENL-LLGDVQANDEEINQALMRSQAKEFT----DKLGLHHEIKDGGLGISVGQAQRLAIARALLRKGDLLLLDEPTASLDAQSENLVLQALNE 528          

HSP 2 Score: 22.7126 bits (47), Expect = 6.849e-12
Identity = 10/35 (28.57%), Postives = 18/35 (51.43%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQL 708
            T + I HRI  +  CD+  V+      + G+ ++L
Sbjct:  534 TTLMITHRIEDLKQCDQIFVMQRGEIVQQGKFTEL 568          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCB9_HUMAN (ATP-binding cassette sub-family B member 9 OS=Homo sapiens GN=ABCB9 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.146e-11
Identity = 41/184 (22.28%), Postives = 84/184 (45.65%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPL-VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            G VD  ++   YR+     VL+ ++ S+  G+   +VG +GSGKS+ + +                                ++ QEPVLF  ++  NI   +     E + ++ ++      +    D   +   + G   S GQ+Q + + R ++++  +L +DEAT+++D++++  IQ+ I
Sbjct:  502 GRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDGKPISAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAI 685          

HSP 2 Score: 28.8758 bits (63), Expect = 1.146e-11
Identity = 16/47 (34.04%), Postives = 24/47 (51.06%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVE 744
            T++ IAHR+ TV      +V+D     + G   QLL +  L A  V+
Sbjct:  693 TVLIIAHRLSTVEHAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQ 739          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MCJD_ECOLX (Microcin-J25 export ATP-binding/permease protein mcjD OS=Escherichia coli GN=mcjD PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.429e-11
Identity = 50/184 (27.17%), Postives = 92/184 (50.00%), Query Frame = 3
Query:   39 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR 584
            N+ + +L   Y S+   +L  ++L +  G+   + G +GSGKSTL+++     +                           + Q+  +F  T+R N+  +  Y  S+ EI+K L+   L  VV  +P  LD+ + + G+N+S GQ+Q + L R+ L+   ++ +DEAT+++D   ++EI   IR
Sbjct:  344 NLSIRELSFSY-SDDKKILNSVSLDLFTGKMYSLTGPSGSGKSTLVKIISGYYKNYFGDIYLNDISLRNISDEDLNDAIYYLTQDDYIFMDTLRFNLR-LANYDASENEIFKVLKLANLS-VVNNEPVSLDTHLINRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEILSSIR 524          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PHNC1_RHOP2 (Phosphonates import ATP-binding protein phnC 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=phnC1 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 62/187 (33.16%), Postives = 88/187 (47.06%), Query Frame = 3
Query:   54 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP---SXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKS-LERCQLKDVVAA----KPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            +L  RY++     LK ++LSI  G+ +G++G +G+GKSTLI+   RLV+P   S                   R R G+I QE  L E  TV  N+   G+      W S   R    DV  A        L   V    D  S GQRQ + + R + +   LL +DE TAS+D +T  ++ R+I E
Sbjct:    6 NLDKRYKTGDR-ALKDVSLSIGAGDIVGLIGPSGAGKSTLIRCVNRLVQPTGGSIRLGDTELTRLGGTELRKARRRMGMIFQEFALIERLTVMENV-LSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSEQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITE 190          
The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
MSBA_PSESM2.204e-1228.11Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_PSEPK2.204e-1229.19Lipid A export ATP-binding/permease protein msbA O... [more]
ABCB9_RAT3.107e-1222.28ATP-binding cassette sub-family B member 9 OS=Ratt... [more]
CBIO1_SPIKU4.153e-1224.59Cobalt import ATP-binding protein cbiO 1 OS=Spirop... [more]
LCN3_LACLA5.252e-1227.84Lacticin-481/lactococcin-DR transport/processing A... [more]
PHNC1_RHOP56.413e-1233.69Phosphonates import ATP-binding protein phnC 1 OS=... [more]
CYDD_HAEIN6.849e-1229.76ATP-binding/permease protein cydD OS=Haemophilus i... [more]
ABCB9_HUMAN1.146e-1122.28ATP-binding cassette sub-family B member 9 OS=Homo... [more]
MCJD_ECOLX1.429e-1127.17Microcin-J25 export ATP-binding/permease protein m... [more]
PHNC1_RHOP22.437e-1133.16Phosphonates import ATP-binding protein phnC 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGTCCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTC
ATAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGG
TATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTA
CAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAG
CCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTCATTGTTGGG
GCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCC
TTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCA
GATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGT
AGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACA
ACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGTTATGCTA
AAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTC
ACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGGAGTCTGCTGCC
TGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGATTGTGA
TAAAGCTATAGTCGTTGATGCACGATGGGCGAAAGAATCTGGCGAGCCAT
CCCAGTTGCTTGAAAAGCCATCACTCTCCGCAGCATCGGTGGAAGAATTA
CCCAACCACACCATCAAACTGGACGAACGTATCCCTTGGACTCGATCGCG
GGTCGAACCGACGTTCCGGTGAAGGAAGCCCGTTATATATACAAGTTAGT
GTTCTGTCGCTGGCACAATCCCTT
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