EY736163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_PSESM (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas syringae pv. tomato GN=msbA PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12 Identity = 52/185 (28.11%), Postives = 85/185 (45.95%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD------EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 G++++ +L Y VL I+ S G+ I +VGR+GSGKSTL + R R + Q LF ++ +NI Y D +I + K+ + P D+ V ++G S GQRQ L + R +LK++ LL +DEAT+++D++++ IQ Sbjct: 351 GHLEVKNLSFFYPQTERQVLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHEMGNILLDGVEINDYRLRNLRKHIAQVNQNVTLFNDSIANNI----AYGDLAGAPRADIEAAAADAYAKEFIDQLPQGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQ 531
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_PSEPK (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas putida (strain KT2440) GN=msbA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12 Identity = 54/185 (29.19%), Postives = 83/185 (44.86%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD------EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 G +++ +L Y VL I+ G+ I +VGR+GSGKSTL + R R + Q LF TV +NI Y D +I + K+ V P D+ V ++G S GQRQ L + R +LK++ LL +DEAT+++D++++ IQ Sbjct: 353 GRLEVRNLSFTYPGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNI----AYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQ 533
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCB9_RAT (ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 3.107e-12 Identity = 41/184 (22.28%), Postives = 84/184 (45.65%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPL-VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 G VD ++ YR+ VL+ ++ S+ G+ +VG +GSGKS+ + + ++ QEPVLF ++ NI + E + ++ ++ + D + + G S GQ+Q + + R ++++ +L +DEAT+++D++++ IQ+ I Sbjct: 498 GRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGEPIGAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAI 681 HSP 2 Score: 30.8018 bits (68), Expect = 3.107e-12 Identity = 20/69 (28.99%), Postives = 32/69 (46.38%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKLDERIPWTRSRVEP 810 T++ IAHR+ TV +V+D + G QLL + L A V+ + L+ + +T EP Sbjct: 689 TVLIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQ---RQMLGLEHPLDYTAGHKEP 754
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CBIO1_SPIKU (Cobalt import ATP-binding protein cbiO 1 OS=Spiroplasma kunkelii GN=cbiO1 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 4.153e-12 Identity = 45/183 (24.59%), Postives = 83/183 (45.36%), Query Frame = 3 Query: 39 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEP--VLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 ++ L D++ RYR N P + G++ I+ GE + ++G GSGKST+ ++ ++ P R GI+ Q P TVR +I G + + K ++ K AA +++ + S GQ+Q + + + ++ DEAT+ +D + EI++I+ Sbjct: 19 SLKLTDVEFRYRENHPNAVDGVSFEINHGEYVTIIGHNGSGKSTISKIIIGVLRPQKGKIEVFGNEVHSSTITGIRKFLGIVFQNPDNQFIGSTVRDDI-AFGLENRQIPQKKMQAIIEK---AAAKVGMNNFLDHEPLMLSGGQKQRVAIASALALSPDIIIFDEATSMLDPKGRKEIKQIM 197 HSP 2 Score: 33.113 bits (74), Expect = 4.153e-12 Identity = 16/42 (38.10%), Postives = 27/42 (64.29%), Query Frame = 1 Query: 586 RESAACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLL 711 +ES TIISI H + +++ DKAIV++ + G+P ++L Sbjct: 201 KESREKTIISITHDMDEILNSDKAIVMNKGQMVKCGKPHEVL 242
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: LCN3_LACLA (Lacticin-481/lactococcin-DR transport/processing ATP-binding protein lcnDR3 OS=Lactococcus lactis subsp. lactis GN=lcnDR3 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.252e-12 Identity = 54/194 (27.84%), Postives = 90/194 (46.39%), Query Frame = 3 Query: 21 NWPAHGNVDLI--DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWK---SLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 N H N +I D+ Y N + I SI GEKI +VG++GSGKSTL + L+ R G++ Q L +G++ NI + +I K L+ + ++V + P K+ S + ++G N S GQ Q L + + +L +++ +F DE +S+D+Q I + + E Sbjct: 455 NIEKHSNNAIILKDISYSYELNN-YIFNNINFSIKKGEKIAIVGKSGSGKSTLFNILLGLIS---------YEGEVTYGYENLRQIIGVVSQNMNLRKGSLIENIVSNNNSEELDIQKINDVLKDVNMLELVDSLPQKIFSQLFENGKNLSGGQIQRLLIAKSLLNNNKFIFWDEPFSSLDNQNRIHIYKNVLE 638 HSP 2 Score: 20.7866 bits (42), Expect = 5.252e-12 Identity = 8/22 (36.36%), Postives = 13/22 (59.09%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVD 669 TII I+H + + D+ I +D Sbjct: 646 TIIMISHHLDVLKYVDRVIYID 667
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PHNC1_RHOP5 (Phosphonates import ATP-binding protein phnC 1 OS=Rhodopseudomonas palustris (strain BisA53) GN=phnC1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12 Identity = 63/187 (33.69%), Postives = 88/187 (47.06%), Query Frame = 3 Query: 54 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP---SXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKS-LERCQLKDVVAA----KPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 +L RY++ L LKG++L I G+ +G++G +G+GKSTLI+ RLV P S R R G+I QE L E TV N+ G+ W S R DV A L V D S GQRQ + + R + + LL +DE TAS+D +T ++ R+I E Sbjct: 6 NLDKRYKTGD-LALKGVSLHIGAGDIVGLIGPSGAGKSTLIRCVNRLVPPTGGSIRLGDTELTRLGGADLRRARRRIGMIFQEFALIERLTVMENV-LSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSDQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITE 190
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CYDD_HAEIN (ATP-binding/permease protein cydD OS=Haemophilus influenzae GN=cydD PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.849e-12 Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 3 Query: 96 KGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLD--SLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 K + I + +VG++G+GK++L+ V + P R + Q P+L +GT++ N+ +G Q +DEEI ++L R Q K+ DKL + D G SVGQ Q L + R +L+ LL +DE TAS+D+Q++ + + + E Sbjct: 367 KPLNFQIPANHNVALVGQSGAGKTSLMNVILGFL-PYEGSLKINGQELRESNLADWRKHIAWVGQNPLLLQGTIKENL-LLGDVQANDEEINQALMRSQAKEFT----DKLGLHHEIKDGGLGISVGQAQRLAIARALLRKGDLLLLDEPTASLDAQSENLVLQALNE 528 HSP 2 Score: 22.7126 bits (47), Expect = 6.849e-12 Identity = 10/35 (28.57%), Postives = 18/35 (51.43%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQL 708 T + I HRI + CD+ V+ + G+ ++L Sbjct: 534 TTLMITHRIEDLKQCDQIFVMQRGEIVQQGKFTEL 568
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCB9_HUMAN (ATP-binding cassette sub-family B member 9 OS=Homo sapiens GN=ABCB9 PE=1 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.146e-11 Identity = 41/184 (22.28%), Postives = 84/184 (45.65%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPL-VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 G VD ++ YR+ VL+ ++ S+ G+ +VG +GSGKS+ + + ++ QEPVLF ++ NI + E + ++ ++ + D + + G S GQ+Q + + R ++++ +L +DEAT+++D++++ IQ+ I Sbjct: 502 GRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDGKPISAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAI 685 HSP 2 Score: 28.8758 bits (63), Expect = 1.146e-11 Identity = 16/47 (34.04%), Postives = 24/47 (51.06%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVE 744 T++ IAHR+ TV +V+D + G QLL + L A V+ Sbjct: 693 TVLIIAHRLSTVEHAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQ 739
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MCJD_ECOLX (Microcin-J25 export ATP-binding/permease protein mcjD OS=Escherichia coli GN=mcjD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.429e-11 Identity = 50/184 (27.17%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 39 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR 584 N+ + +L Y S+ +L ++L + G+ + G +GSGKSTL+++ + + Q+ +F T+R N+ + Y S+ EI+K L+ L VV +P LD+ + + G+N+S GQ+Q + L R+ L+ ++ +DEAT+++D ++EI IR Sbjct: 344 NLSIRELSFSY-SDDKKILNSVSLDLFTGKMYSLTGPSGSGKSTLVKIISGYYKNYFGDIYLNDISLRNISDEDLNDAIYYLTQDDYIFMDTLRFNLR-LANYDASENEIFKVLKLANLS-VVNNEPVSLDTHLINRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEILSSIR 524
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PHNC1_RHOP2 (Phosphonates import ATP-binding protein phnC 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=phnC1 PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11 Identity = 62/187 (33.16%), Postives = 88/187 (47.06%), Query Frame = 3 Query: 54 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP---SXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKS-LERCQLKDVVAA----KPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 +L RY++ LK ++LSI G+ +G++G +G+GKSTLI+ RLV+P S R R G+I QE L E TV N+ G+ W S R DV A L V D S GQRQ + + R + + LL +DE TAS+D +T ++ R+I E Sbjct: 6 NLDKRYKTGDR-ALKDVSLSIGAGDIVGLIGPSGAGKSTLIRCVNRLVQPTGGSIRLGDTELTRLGGTELRKARRRMGMIFQEFALIERLTVMENV-LSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSEQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITE 190 The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 452
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bpback to top |