EY736163

Overview
NameEY736163
Unique NameEY736163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PSTB1_THETN (Phosphate import ATP-binding protein pstB 1 OS=Thermoanaerobacter tengcongensis GN=pstB1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11
Identity = 50/181 (27.62%), Postives = 84/181 (46.41%), Query Frame = 3
Query:   63 VRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII----REGV 593
            V Y  +   +LK +           VVG +G+GKST++++  RL+EP+                   R + G++ Q P LFEGTV+ NI+       E   K+++     + V    D L   V    +N S G+ Q + + R +     +L +DE T+S+D  + + I+ +I    REG+
Sbjct:    8 VNYFRDGKYILKNVYFKFEKNGIYTVVGPSGAGKSTMLKLINRLIEPTEGAIFINGVEYKNIDVILLRRKIGMVFQRPFLFEGTVKENIELGPSLRGE---KNIDALFYLEAVGLSKDYLFKDV----NNLSGGEAQRVSIARALANSPEVLLLDEPTSSLDPTSTSIIEELIKRLNREGI 181          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PHNC1_SILST (Phosphonates import ATP-binding protein phnC 1 OS=Silicibacter sp. (strain TM1040) GN=phnC1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 56/189 (29.63%), Postives = 92/189 (48.68%), Query Frame = 3
Query:   48 LIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRS---RFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSL----VADS-GDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            + +L  RY S  P VLK + L++ G +   V+G +G+GKSTL++   RLVEP+                   RS   R G++ Q   L +  TV  N+   G+      W +L R   KD +    + ++ +     AD   D  S G+RQ + + R +++   +L  DE TAS+D +T  +I  ++R+
Sbjct:    4 ITNLTKRYGSGDP-VLKELNLTVEGEQLTSVIGSSGAGKSTLLRCINRLVEPTSGSVELNGTEFTTLSRRELRSARRRIGMVFQGFNLIDRLTVMENVQ-AGRLGYISTWAALTRRYPKDDIRRAFELMERVGIAHYADKRADELSGGERQRVGVVRALMQRPEILLADEPTASLDPKTSEQIMSLLRD 190          
The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
PSTB1_THETN5.429e-1127.62Phosphate import ATP-binding protein pstB 1 OS=The... [more]
PHNC1_SILST7.090e-1129.63Phosphonates import ATP-binding protein phnC 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGTCCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTC
ATAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGG
TATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTA
CAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAG
CCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTCATTGTTGGG
GCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCC
TTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCA
GATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGT
AGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACA
ACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGTTATGCTA
AAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTC
ACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGGAGTCTGCTGCC
TGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGATTGTGA
TAAAGCTATAGTCGTTGATGCACGATGGGCGAAAGAATCTGGCGAGCCAT
CCCAGTTGCTTGAAAAGCCATCACTCTCCGCAGCATCGGTGGAAGAATTA
CCCAACCACACCATCAAACTGGACGAACGTATCCCTTGGACTCGATCGCG
GGTCGAACCGACGTTCCGGTGAAGGAAGCCCGTTATATATACAAGTTAGT
GTTCTGTCGCTGGCACAATCCCTT
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