EY736163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC7_DICDI (ABC transporter C family member 7 OS=Dictyostelium discoideum GN=abcC7 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 9.438e-42 Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 3 Query: 15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGV 593 P NWP G + +++++YR N LK I+ I EKIG+VG++GSGKST + FR++E S R+ GI PQEP +F GT+R NIDP G YSD EIW +LE+ +LK+ ++ P K+D+++ + N S GQ+QLLCL RV+LK +L+F DE ++S+D T ++ ++E + Sbjct: 1074 PINWPQKGEIQFKNVEIKYRPNLKPSLKNISFDIKSNEKIGIVGKSGSGKSTTMLALFRMIECSKGSIHIDGIDISKISLSKLRNSIGICPQEPFIFSGTIRKNIDPFGIYSDSEIWLALEKVKLKETISLLPMKIDTIIHEQA-NLSFGQKQLLCLTRVLLKSPKLVFFDEHSSSIDYFTAHQLNISVKENI 1265 HSP 2 Score: 32.7278 bits (73), Expect = 9.438e-42 Identity = 15/42 (35.71%), Postives = 28/42 (66.67%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLS 729 T ++IAHRI T++D D+ +V+D SGE ++ +K +++ Sbjct: 1269 TTLTIAHRIDTIIDSDRILVID------SGELIEIFDKNNIN 1304
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC5_DICDI (ABC transporter C family member 5 OS=Dictyostelium discoideum GN=abcC5 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.718e-41 Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = 3 Query: 9 RPPPNWPAHGN------VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 RPP WP+ N + ++ + YR P VLKGI+ I GEKIG+ GRTGSGKS+L+ FR+VE S RS+ IIPQEPV+F GT+RSN+D + +++D E+W L+ QL + V + L DNWS GQ+QL+ LGR +LK ++L DEATASVDS +D IQRIIRE Sbjct: 1193 RPPMGWPSLTNSNHTPPIIFENVVMSYRQGLPAVLKGISFEIKAGEKIGICGRTGSGKSSLLLALFRIVELSSGRIIIDGLDISKIGLKDLRSQLAIIPQEPVMFTGTLRSNLDSLSEHTDSELWDVLKEIQLYEHVKKVSVADEGLDLRVNDNWSQGQKQLIGLGRALLKKPKILVCDEATASVDSLSDELIQRIIRE 1391 HSP 2 Score: 30.4166 bits (67), Expect = 2.718e-41 Identity = 13/36 (36.11%), Postives = 25/36 (69.44%), Query Frame = 1 Query: 607 IISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLE 714 I++IAHR+ T+++ D+ +V+D+ E +PS L + Sbjct: 1398 ILTIAHRLNTIVESDRIMVLDSGSIVEFNKPSILAQ 1433
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCCE_DICDI (ABC transporter C family member 14 OS=Dictyostelium discoideum GN=abcC14 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.951e-41 Identity = 84/210 (40.00%), Postives = 134/210 (63.81%), Query Frame = 3 Query: 21 NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN-WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647 NWP G ++ +++++YR N+ LK ++ + EKIG+VGRTG+GK+T+ FR+VE S RS GI+PQ+P +F GT+RSNIDP +++D EIW+S+E+ +LKD + + P KL++ + ++GDN +S GQ+QLLCL R +LK+ +++ MDEAT+S+D T I++ I+E N++ C+ T +H L Sbjct: 1064 NWPNKGIIEFKNVEIKYRPNSEPNLKDLSFKVQSSEKIGIVGRTGAGKTTIASSLFRMVECSKGLILIDGIDISKVQLQKLRSSIGIVPQDPFIFTGTIRSNIDPFNEFTDFEIWESIEKVKLKDAINSMPLKLETALQENGDNGFSYGQKQLLCLCRTILKNFKIILMDEATSSIDYHTAQLIKQTIQE------NFKDCTTLTIAHRL 1267
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC6_DICDI (ABC transporter C family member 6 OS=Dictyostelium discoideum GN=abcC6 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.854e-41 Identity = 84/210 (40.00%), Postives = 134/210 (63.81%), Query Frame = 3 Query: 21 NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN-WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647 NWP G ++ +++++YR N+ LK ++ + EKIG+VGRTG+GK+T+ FR+VE S RS GI+PQ+P +F GT+RSNIDP +++D EIW+S+E+ +LKD + + P KL++ + ++GDN +S GQ+QLLCL R +LK+ +++ MDEAT+S+D T I++ I+E N++ C+ T +H L Sbjct: 1094 NWPNKGIIEFKNVEIKYRPNSEPNLKDLSFKVQSSEKIGIVGRTGAGKTTIASSLFRMVECSKGLILIDGIDISKVQLQKLRSSIGIVPQDPFIFTGTIRSNIDPFNEFTDFEIWESVEKVKLKDAINSMPLKLETALQENGDNGFSYGQKQLLCLCRTILKNFKIILMDEATSSIDYHTAQLIKQTIQE------NFKDCTTLTIAHRL 1297
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC9_HUMAN (ATP-binding cassette transporter sub-family C member 9 OS=Homo sapiens GN=ABCC9 PE=1 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.731e-40 Identity = 80/189 (42.33%), Postives = 119/189 (62.96%), Query Frame = 3 Query: 15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 P +WP G + + DL VRY +N VLK + I G+K+G+ GRTGSGKS+L FFR+V+ RSR II Q+P+LF G++R N+DP + +D+ +W++LE QLK++V + P LD++V + G+N+SVGQRQL CL R ++ S +L MDEATAS+D T+ +Q+++ Sbjct: 1303 PEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVV 1491 HSP 2 Score: 25.0238 bits (53), Expect = 1.731e-40 Identity = 8/20 (40.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIV 663 T+++IAHR+ ++MD +V Sbjct: 1499 TVVTIAHRVSSIMDAGLVLV 1518
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC9_RAT (ATP-binding cassette transporter sub-family C member 9 OS=Rattus norvegicus GN=Abcc9 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.939e-40 Identity = 80/189 (42.33%), Postives = 118/189 (62.43%), Query Frame = 3 Query: 15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 P +WP G + + DL VRY +N VLK + I G+K+G+ GRTGSGKS+L FFR+V+ RSR II Q+P+LF G++R N+DP + +D+ +W++LE QLK++V + P LD+ V + G+N+SVGQRQL CL R ++ S +L MDEATAS+D T+ +Q+++ Sbjct: 1299 PEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVV 1487 HSP 2 Score: 25.0238 bits (53), Expect = 2.939e-40 Identity = 8/20 (40.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIV 663 T+++IAHR+ ++MD +V Sbjct: 1495 TVVTIAHRVSSIMDAGLVLV 1514
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCCD_DICDI (ABC transporter C family member 13 OS=Dictyostelium discoideum GN=abcC13 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.262e-40 Identity = 81/208 (38.94%), Postives = 127/208 (61.06%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647 WP+ G ++ D+++RYR + LK ++ I+ + IG+VGRTG+GKST+ FR+VE S RS GI+PQ+P +F GT+R NIDP +Y+D EIW +LE+ +LK +++ P KL++++ + GD S GQ+QLLCL R +LK+S+++ MDEAT+ +D T I++ + E N+ C+ T +H L Sbjct: 1097 WPSKGEIEFRDVEIRYRPTSEPSLKNLSFKINSNDHIGIVGRTGAGKSTVGISLFRMVECSKGSILIDGIDISKIGLHDLRSSLGIVPQDPFIFSGTIRLNIDPFNKYTDSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTGDLIKQTLLE------NFNDCTMLTIAHRL 1298
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC2_DICDI (ABC transporter C family member 2 OS=Dictyostelium discoideum GN=abcC2 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.262e-40 Identity = 84/208 (40.38%), Postives = 128/208 (61.54%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647 WP+ G V+ +++++YR LK I+ I+ + IGVVGRTG+GKST+ FR+VE S R GI+PQ+P +F G++R NIDP +Y+D+EIW +LE+ +LKD +++ P KL+S V ++GD S GQ+QLLCL R +LK+S+++ MDEAT+ +D T A +++ I E N+ C+ T +H L Sbjct: 1131 WPSRGEVEFKNVEIKYRPTADPSLKNISFKINAKDHIGVVGRTGAGKSTVGISLFRMVECSKGSIFIDGVDISKVGLHELRDALGIVPQDPFIFSGSIRMNIDPFNKYTDDEIWTALEKVKLKDAISSMPLKLESGVQENGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTAALLKQTIDE------NFNDCTMLTIAHRL 1332
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 5.001e-40 Identity = 74/186 (39.78%), Postives = 110/186 (59.14%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 WP HG V+ ++ +RY S P L I+ +I GG +GV+GRTG+GKS+++ FRL RS ++PQ P LF+G++R N+DP+G D IW+ L++C++K V + LDS V +SG ++SVGQRQLLCL R +LK S++L +DE TA++D T + + I Sbjct: 952 WPVHGLVEFHNVTMRYISTLPPALTQISFTIQGGMHVGVIGRTGAGKSSILNALFRLTPVCSGEILVDGKNISHLPIRELRSCLAVVPQSPFLFQGSLRDNLDPLGLSEDWRIWEILDKCKVKAAVES-VGGLDSYVKESGCSFSVGQRQLLCLARALLKSSKILCLDECTANIDVHTASLLHNTI 1136 HSP 2 Score: 41.2022 bits (95), Expect = 5.001e-40 Identity = 20/50 (40.00%), Postives = 30/50 (60.00%), Query Frame = 1 Query: 589 ESAACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAAS 738 E T+I+IAHRI TV+D D +++D E G+P LL+ S + +S Sbjct: 1139 ECKGVTVITIAHRISTVVDLDSILILDRGILVEQGKPQHLLQDDSSTFSS 1188
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC9_RABIT (ATP-binding cassette transporter sub-family C member 9 OS=Oryctolagus cuniculus GN=ABCC9 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 6.499e-40 Identity = 79/189 (41.80%), Postives = 118/189 (62.43%), Query Frame = 3 Query: 15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 P +WP G + + DL VRY +N VLK + I G+K+G+ GRTGSGKS+L FFR+V+ RSR II Q+P+LF G++R N+DP + +D+ +W++LE QLK++V + LD++V + G+N+SVGQRQL CL R ++ S +L MDEATAS+D T+ +Q+++ Sbjct: 1303 PEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLSGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVV 1491 HSP 2 Score: 26.1794 bits (56), Expect = 6.499e-40 Identity = 8/20 (40.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIV 663 T+++IAHR+ +++D D +V Sbjct: 1499 TVVTIAHRVSSIVDADLVLV 1518 The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 452
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bpback to top |