EY736163

Overview
NameEY736163
Unique NameEY736163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC7_DICDI (ABC transporter C family member 7 OS=Dictyostelium discoideum GN=abcC7 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 9.438e-42
Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 3
Query:   15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGV 593
            P NWP  G +   +++++YR N    LK I+  I   EKIG+VG++GSGKST +   FR++E S                   R+  GI PQEP +F GT+R NIDP G YSD EIW +LE+ +LK+ ++  P K+D+++ +   N S GQ+QLLCL RV+LK  +L+F DE ++S+D  T  ++   ++E +
Sbjct: 1074 PINWPQKGEIQFKNVEIKYRPNLKPSLKNISFDIKSNEKIGIVGKSGSGKSTTMLALFRMIECSKGSIHIDGIDISKISLSKLRNSIGICPQEPFIFSGTIRKNIDPFGIYSDSEIWLALEKVKLKETISLLPMKIDTIIHEQA-NLSFGQKQLLCLTRVLLKSPKLVFFDEHSSSIDYFTAHQLNISVKENI 1265          

HSP 2 Score: 32.7278 bits (73), Expect = 9.438e-42
Identity = 15/42 (35.71%), Postives = 28/42 (66.67%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLS 729
            T ++IAHRI T++D D+ +V+D      SGE  ++ +K +++
Sbjct: 1269 TTLTIAHRIDTIIDSDRILVID------SGELIEIFDKNNIN 1304          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC5_DICDI (ABC transporter C family member 5 OS=Dictyostelium discoideum GN=abcC5 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.718e-41
Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = 3
Query:    9 RPPPNWPAHGN------VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            RPP  WP+  N      +   ++ + YR   P VLKGI+  I  GEKIG+ GRTGSGKS+L+   FR+VE S                   RS+  IIPQEPV+F GT+RSN+D + +++D E+W  L+  QL + V       + L     DNWS GQ+QL+ LGR +LK  ++L  DEATASVDS +D  IQRIIRE
Sbjct: 1193 RPPMGWPSLTNSNHTPPIIFENVVMSYRQGLPAVLKGISFEIKAGEKIGICGRTGSGKSSLLLALFRIVELSSGRIIIDGLDISKIGLKDLRSQLAIIPQEPVMFTGTLRSNLDSLSEHTDSELWDVLKEIQLYEHVKKVSVADEGLDLRVNDNWSQGQKQLIGLGRALLKKPKILVCDEATASVDSLSDELIQRIIRE 1391          

HSP 2 Score: 30.4166 bits (67), Expect = 2.718e-41
Identity = 13/36 (36.11%), Postives = 25/36 (69.44%), Query Frame = 1
Query:  607 IISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLE 714
            I++IAHR+ T+++ D+ +V+D+    E  +PS L +
Sbjct: 1398 ILTIAHRLNTIVESDRIMVLDSGSIVEFNKPSILAQ 1433          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCCE_DICDI (ABC transporter C family member 14 OS=Dictyostelium discoideum GN=abcC14 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.951e-41
Identity = 84/210 (40.00%), Postives = 134/210 (63.81%), Query Frame = 3
Query:   21 NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN-WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647
            NWP  G ++  +++++YR N+   LK ++  +   EKIG+VGRTG+GK+T+    FR+VE S                   RS  GI+PQ+P +F GT+RSNIDP  +++D EIW+S+E+ +LKD + + P KL++ + ++GDN +S GQ+QLLCL R +LK+ +++ MDEAT+S+D  T   I++ I+E      N++ C+  T +H L
Sbjct: 1064 NWPNKGIIEFKNVEIKYRPNSEPNLKDLSFKVQSSEKIGIVGRTGAGKTTIASSLFRMVECSKGLILIDGIDISKVQLQKLRSSIGIVPQDPFIFTGTIRSNIDPFNEFTDFEIWESIEKVKLKDAINSMPLKLETALQENGDNGFSYGQKQLLCLCRTILKNFKIILMDEATSSIDYHTAQLIKQTIQE------NFKDCTTLTIAHRL 1267          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC6_DICDI (ABC transporter C family member 6 OS=Dictyostelium discoideum GN=abcC6 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.854e-41
Identity = 84/210 (40.00%), Postives = 134/210 (63.81%), Query Frame = 3
Query:   21 NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN-WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647
            NWP  G ++  +++++YR N+   LK ++  +   EKIG+VGRTG+GK+T+    FR+VE S                   RS  GI+PQ+P +F GT+RSNIDP  +++D EIW+S+E+ +LKD + + P KL++ + ++GDN +S GQ+QLLCL R +LK+ +++ MDEAT+S+D  T   I++ I+E      N++ C+  T +H L
Sbjct: 1094 NWPNKGIIEFKNVEIKYRPNSEPNLKDLSFKVQSSEKIGIVGRTGAGKTTIASSLFRMVECSKGLILIDGIDISKVQLQKLRSSIGIVPQDPFIFTGTIRSNIDPFNEFTDFEIWESVEKVKLKDAINSMPLKLETALQENGDNGFSYGQKQLLCLCRTILKNFKIILMDEATSSIDYHTAQLIKQTIQE------NFKDCTTLTIAHRL 1297          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC9_HUMAN (ATP-binding cassette transporter sub-family C member 9 OS=Homo sapiens GN=ABCC9 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.731e-40
Identity = 80/189 (42.33%), Postives = 119/189 (62.96%), Query Frame = 3
Query:   15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            P +WP  G + + DL VRY +N   VLK +   I  G+K+G+ GRTGSGKS+L   FFR+V+                     RSR  II Q+P+LF G++R N+DP  + +D+ +W++LE  QLK++V + P  LD++V + G+N+SVGQRQL CL R  ++ S +L MDEATAS+D  T+  +Q+++
Sbjct: 1303 PEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVV 1491          

HSP 2 Score: 25.0238 bits (53), Expect = 1.731e-40
Identity = 8/20 (40.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIV 663
            T+++IAHR+ ++MD    +V
Sbjct: 1499 TVVTIAHRVSSIMDAGLVLV 1518          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC9_RAT (ATP-binding cassette transporter sub-family C member 9 OS=Rattus norvegicus GN=Abcc9 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.939e-40
Identity = 80/189 (42.33%), Postives = 118/189 (62.43%), Query Frame = 3
Query:   15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            P +WP  G + + DL VRY +N   VLK +   I  G+K+G+ GRTGSGKS+L   FFR+V+                     RSR  II Q+P+LF G++R N+DP  + +D+ +W++LE  QLK++V + P  LD+ V + G+N+SVGQRQL CL R  ++ S +L MDEATAS+D  T+  +Q+++
Sbjct: 1299 PEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVV 1487          

HSP 2 Score: 25.0238 bits (53), Expect = 2.939e-40
Identity = 8/20 (40.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIV 663
            T+++IAHR+ ++MD    +V
Sbjct: 1495 TVVTIAHRVSSIMDAGLVLV 1514          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCCD_DICDI (ABC transporter C family member 13 OS=Dictyostelium discoideum GN=abcC13 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.262e-40
Identity = 81/208 (38.94%), Postives = 127/208 (61.06%), Query Frame = 3
Query:   24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647
            WP+ G ++  D+++RYR  +   LK ++  I+  + IG+VGRTG+GKST+    FR+VE S                   RS  GI+PQ+P +F GT+R NIDP  +Y+D EIW +LE+ +LK  +++ P KL++++ + GD  S GQ+QLLCL R +LK+S+++ MDEAT+ +D  T   I++ + E      N+  C+  T +H L
Sbjct: 1097 WPSKGEIEFRDVEIRYRPTSEPSLKNLSFKINSNDHIGIVGRTGAGKSTVGISLFRMVECSKGSILIDGIDISKIGLHDLRSSLGIVPQDPFIFSGTIRLNIDPFNKYTDSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTGDLIKQTLLE------NFNDCTMLTIAHRL 1298          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC2_DICDI (ABC transporter C family member 2 OS=Dictyostelium discoideum GN=abcC2 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.262e-40
Identity = 84/208 (40.38%), Postives = 128/208 (61.54%), Query Frame = 3
Query:   24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQHCSQDTHSHGL 647
            WP+ G V+  +++++YR      LK I+  I+  + IGVVGRTG+GKST+    FR+VE S                   R   GI+PQ+P +F G++R NIDP  +Y+D+EIW +LE+ +LKD +++ P KL+S V ++GD  S GQ+QLLCL R +LK+S+++ MDEAT+ +D  T A +++ I E      N+  C+  T +H L
Sbjct: 1131 WPSRGEVEFKNVEIKYRPTADPSLKNISFKINAKDHIGVVGRTGAGKSTVGISLFRMVECSKGSIFIDGVDISKVGLHELRDALGIVPQDPFIFSGSIRMNIDPFNKYTDDEIWTALEKVKLKDAISSMPLKLESGVQENGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTAALLKQTIDE------NFNDCTMLTIAHRL 1332          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 5.001e-40
Identity = 74/186 (39.78%), Postives = 110/186 (59.14%), Query Frame = 3
Query:   24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            WP HG V+  ++ +RY S  P  L  I+ +I GG  +GV+GRTG+GKS+++   FRL                       RS   ++PQ P LF+G++R N+DP+G   D  IW+ L++C++K  V +    LDS V +SG ++SVGQRQLLCL R +LK S++L +DE TA++D  T + +   I
Sbjct:  952 WPVHGLVEFHNVTMRYISTLPPALTQISFTIQGGMHVGVIGRTGAGKSSILNALFRLTPVCSGEILVDGKNISHLPIRELRSCLAVVPQSPFLFQGSLRDNLDPLGLSEDWRIWEILDKCKVKAAVES-VGGLDSYVKESGCSFSVGQRQLLCLARALLKSSKILCLDECTANIDVHTASLLHNTI 1136          

HSP 2 Score: 41.2022 bits (95), Expect = 5.001e-40
Identity = 20/50 (40.00%), Postives = 30/50 (60.00%), Query Frame = 1
Query:  589 ESAACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAAS 738
            E    T+I+IAHRI TV+D D  +++D     E G+P  LL+  S + +S
Sbjct: 1139 ECKGVTVITIAHRISTVVDLDSILILDRGILVEQGKPQHLLQDDSSTFSS 1188          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCC9_RABIT (ATP-binding cassette transporter sub-family C member 9 OS=Oryctolagus cuniculus GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.499e-40
Identity = 79/189 (41.80%), Postives = 118/189 (62.43%), Query Frame = 3
Query:   15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            P +WP  G + + DL VRY +N   VLK +   I  G+K+G+ GRTGSGKS+L   FFR+V+                     RSR  II Q+P+LF G++R N+DP  + +D+ +W++LE  QLK++V +    LD++V + G+N+SVGQRQL CL R  ++ S +L MDEATAS+D  T+  +Q+++
Sbjct: 1303 PEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLSGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVV 1491          

HSP 2 Score: 26.1794 bits (56), Expect = 6.499e-40
Identity = 8/20 (40.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIV 663
            T+++IAHR+ +++D D  +V
Sbjct: 1499 TVVTIAHRVSSIVDADLVLV 1518          
The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
ABCC7_DICDI9.438e-4240.41ABC transporter C family member 7 OS=Dictyostelium... [more]
ABCC5_DICDI2.718e-4144.72ABC transporter C family member 5 OS=Dictyostelium... [more]
ABCCE_DICDI2.951e-4140.00ABC transporter C family member 14 OS=Dictyosteliu... [more]
ABCC6_DICDI3.854e-4140.00ABC transporter C family member 6 OS=Dictyostelium... [more]
ABCC9_HUMAN1.731e-4042.33ATP-binding cassette transporter sub-family C memb... [more]
ABCC9_RAT2.939e-4042.33ATP-binding cassette transporter sub-family C memb... [more]
ABCCD_DICDI4.262e-4038.94ABC transporter C family member 13 OS=Dictyosteliu... [more]
ABCC2_DICDI4.262e-4040.38ABC transporter C family member 2 OS=Dictyostelium... [more]
AB13C_ARATH5.001e-4039.78ABC transporter C family member 13 OS=Arabidopsis ... [more]
ABCC9_RABIT6.499e-4041.80ATP-binding cassette transporter sub-family C memb... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGTCCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTC
ATAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGG
TATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTA
CAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAG
CCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTCATTGTTGGG
GCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCC
TTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCA
GATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGT
AGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACA
ACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGTTATGCTA
AAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTC
ACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGGAGTCTGCTGCC
TGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGATTGTGA
TAAAGCTATAGTCGTTGATGCACGATGGGCGAAAGAATCTGGCGAGCCAT
CCCAGTTGCTTGAAAAGCCATCACTCTCCGCAGCATCGGTGGAAGAATTA
CCCAACCACACCATCAAACTGGACGAACGTATCCCTTGGACTCGATCGCG
GGTCGAACCGACGTTCCGGTGAAGGAAGCCCGTTATATATACAAGTTAGT
GTTCTGTCGCTGGCACAATCCCTT
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