EY736156

Overview
NameEY736156
Unique NameEY736156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736156 vs. ExPASy Swiss-Prot
Match: SYYC_MOUSE (Tyrosyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Yars PE=2 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 1.493e-42
Identity = 91/169 (53.85%), Postives = 120/169 (71.01%), Query Frame = 1
Query:  118 EPEISI-ARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSD-NTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 615
            EPE  I +RLDIRVGKI  V+KHPDAD+LYVE+IDVGE +PRTVVSGLV+ +P EE+Q+R+V VLCNLKP  MRG+ S  M+LCAS    + +VE ++PP  +  GERV   G+E G+PD+ L PKKKV+E +Q D   + E +A +K   F T  G  +  S++ G+I
Sbjct:  359 EPEEVIPSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERVFVQGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGFVSCKSLKGGNI 527          
BLAST of EY736156 vs. ExPASy Swiss-Prot
Match: SYYC_RAT (Tyrosyl-tRNA synthetase, cytoplasmic OS=Rattus norvegicus GN=Yars PE=2 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 2.547e-42
Identity = 89/166 (53.61%), Postives = 118/166 (71.08%), Query Frame = 1
Query:  124 EISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSD-NTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 615
            EI  +RLDIRVGKI  V+KHPDAD+LYVE+IDVGE +PRTVVSGLV+ +P EE+Q+R+V VLCNLKP  MRG+ S  M+LCAS    + +VE ++PP  +  GERV   G+E G+PD+ L PKKKV+E +Q D   + + VA +K   F T  G  +  S++ G+I
Sbjct:  362 EIIPSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERVFVQGYEKGQPDEELKPKKKVFEKLQADFKISDDCVAQWKQTNFMTKLGFVSCKSLKGGNI 527          
BLAST of EY736156 vs. ExPASy Swiss-Prot
Match: SYYC_HUMAN (Tyrosyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=YARS PE=1 SV=4)

HSP 1 Score: 172.555 bits (436), Expect = 2.547e-42
Identity = 91/169 (53.85%), Postives = 120/169 (71.01%), Query Frame = 1
Query:  118 EPEISI-ARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSD-NTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 615
            EPE  I +RLDIRVGKI  V+KHPDAD+LYVE+IDVGE +PRTVVSGLV+ +P EE+Q+R+V VLCNLKP  MRG++S  M+LCAS    N +VE ++PP  +  GE V   G+E G+PD+ L PKKKV+E +Q D   + E +A +K   F T  G  +  S++ G+I
Sbjct:  359 EPEEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNI 527          
BLAST of EY736156 vs. ExPASy Swiss-Prot
Match: SYYC_XENLA (Tyrosyl-tRNA synthetase, cytoplasmic OS=Xenopus laevis GN=yars PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.001e-38
Identity = 84/166 (50.60%), Postives = 112/166 (67.47%), Query Frame = 1
Query:  124 EISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTK-VELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 615
            EI  + LD+RVGKI  V +HPDAD+LYVE +DVGE  PR VVSGLV+++P +++  R V +LCNLKP  MRGI+S  M+LCAST    K VE ++PP  +  GER+   G+E GEP+  L PKKKV+E +QVD   + +L A +K   F T  G  T  +++ GSI
Sbjct:  362 EIDPSLLDLRVGKILSVSQHPDADSLYVESVDVGEANPRCVVSGLVQYVPSDQLLGRSVVLLCNLKPQKMRGIESQGMLLCASTEGEQKQVEPLDPPSGSAPGERIYIEGYENGEPEGELKPKKKVFEKLQVDFRISDDLCAQWKGKNFLTKLGSVTCKTLRGGSI 527          
BLAST of EY736156 vs. ExPASy Swiss-Prot
Match: SYYC_XENTR (Tyrosyl-tRNA synthetase, cytoplasmic OS=Xenopus tropicalis GN=yars PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.708e-38
Identity = 84/166 (50.60%), Postives = 113/166 (68.07%), Query Frame = 1
Query:  124 EISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTK-VELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGICTVSSIQSGSI 615
            EI  + LD+RVGKI  V++HPDAD+LYVE +DVGE  PR VVSGLV+++P +++  R V +LCNLKP  MRGI+S  M+LCAST    K VE ++PP  +  GER+   G+E GEP+  L PKKKV+E +QVD   + +L A +K   F T  G  T  +++ GSI
Sbjct:  362 EIDPSLLDLRVGKILSVRQHPDADSLYVESVDVGEENPRCVVSGLVQYVPSDQLLGRSVVLLCNLKPQKMRGIESQGMLLCASTEGEQKQVEPLDPPTGSAPGERIYIEGYENGEPEGELKPKKKVFEKLQVDFRISDDLCAQWKGKNFLTKLGSVTCKTLRGGSI 527          
BLAST of EY736156 vs. ExPASy Swiss-Prot
Match: G4P1_YEAST (GU4 nucleic-binding protein 1 OS=Saccharomyces cerevisiae GN=ARC1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.970e-38
Identity = 86/140 (61.43%), Postives = 98/140 (70.00%), Query Frame = 1
Query:  142 LDIRVGKITKVQKHPDADALYVEEIDVGEVQ-PRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGE-PDDVLNPKKKVWETVQVDLHTNTELVACYKD 555
            +D RVG I K  KHPDAD+LYV  IDVG+ + PRTV SGLVKH PL+ MQER V V+CNLKPV MRGIKS AMVLC S  D  KVE VEPPK +K G++V F GF  E P   LNPKKK+WE +Q    TN  L   +KD
Sbjct:  209 IDFRVGFIQKAIKHPDADSLYVSTIDVGDEEGPRTVCSGLVKHFPLDAMQERYVVVVCNLKPVNMRGIKSTAMVLCGSNDD--KVEFVEPPKDSKAGDKVFFEGFGDEAPMKQLNPKKKIWEHLQPHFTTNDGLEVIFKD 346          
BLAST of EY736156 vs. ExPASy Swiss-Prot
Match: YLF4_SCHPO (Uncharacterized tRNA-binding protein C30C2.04 OS=Schizosaccharomyces pombe GN=SPAC30C2.04 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.088e-36
Identity = 78/168 (46.43%), Postives = 110/168 (65.48%), Query Frame = 1
Query:  142 LDIRVGKITKVQKHPDADALYVEEIDVGEVQ-PRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFE-GEPDDVLNPKKKVWETVQVDLHTNTELVACYKD--------IPFTTSAGICTVSSIQSGSI 615
            +D R+G I K  KHP+AD+LYV  I  G+ + PRTV SGLVK+IPLE+MQ+R V V+ NLKPV MR +KS AMV CAS+ D + VE V PP++A+IG+R+ F GF+  EP+  LNPK+K+WE +Q    +  +L+  YKD        +      G C   ++ +G++
Sbjct:  282 IDFRIGFIEKAVKHPNADSLYVSTIHCGDAEGPRTVCSGLVKYIPLEQMQQRKVIVVANLKPVNMRSVKSQAMVFCASSPDKSVVEFVLPPENAEIGDRLTFEGFDTEEPEAQLNPKRKIWEAIQPGFTSGEDLICGYKDESGLHRLFVKGKKDLGFCKAQTVVNGTL 449          
BLAST of EY736156 vs. ExPASy Swiss-Prot
Match: SYM_PYRAB (Methionyl-tRNA synthetase OS=Pyrococcus abyssi GN=metG PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.249e-17
Identity = 47/101 (46.53%), Postives = 69/101 (68.32%), Query Frame = 1
Query:  136 ARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERV 438
            A+LD+RVGKI +V+ HP+AD LYV ++D+G+ + RT+V+GL K+   EE+  R V V+ NL+P  +RGI S  M+L A   D  +V L+ P K  K+G +V
Sbjct:  624 AKLDLRVGKIIEVKDHPNADKLYVVKVDLGD-EVRTLVAGLKKYYKPEELLNRYVVVVANLEPKKLRGIGSQGMLLAA--DDGERVALLMPDKEVKLGAKV 721          
BLAST of EY736156 vs. ExPASy Swiss-Prot
Match: SYM_PYRFU (Methionyl-tRNA synthetase OS=Pyrococcus furiosus GN=metG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.407e-16
Identity = 44/101 (43.56%), Postives = 69/101 (68.32%), Query Frame = 1
Query:  136 ARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERV 438
            +++D+R+GKI +VQ HP+AD LYV ++D+G  + RT+V+GL K+   EE+  R V ++ NL+P  +RG++S  M+L A   D  KV L+ P K  K+G +V
Sbjct:  626 SKIDLRIGKIVEVQDHPNADKLYVVKVDLGG-EIRTLVAGLKKYYKPEELLNRYVVIVANLEPKKLRGVESQGMLLAA--DDGEKVALLMPDKEVKLGAKV 723          
BLAST of EY736156 vs. ExPASy Swiss-Prot
Match: SYM_PYRHO (Methionyl-tRNA synthetase OS=Pyrococcus horikoshii GN=metG PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16
Identity = 43/101 (42.57%), Postives = 70/101 (69.31%), Query Frame = 1
Query:  136 ARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERV 438
            A+LD+RVGKI +V+ HP+AD LY+ ++D+G+ + RT+V+GL K+   EE+  + V ++ NL+P  +RG++S  M+L A   +N  V L+ P K  K+G +V
Sbjct:  625 AKLDLRVGKIIEVKDHPNADKLYIVKVDLGK-EVRTLVAGLKKYYKPEELLNKYVIIVANLEPKKLRGVESQGMLLAADDGEN--VALLMPDKEVKLGAKV 722          
The following BLAST results are available for this feature:
BLAST of EY736156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SYYC_MOUSE1.493e-4253.85Tyrosyl-tRNA synthetase, cytoplasmic OS=Mus muscul... [more]
SYYC_RAT2.547e-4253.61Tyrosyl-tRNA synthetase, cytoplasmic OS=Rattus nor... [more]
SYYC_HUMAN2.547e-4253.85Tyrosyl-tRNA synthetase, cytoplasmic OS=Homo sapie... [more]
SYYC_XENLA1.001e-3850.60Tyrosyl-tRNA synthetase, cytoplasmic OS=Xenopus la... [more]
SYYC_XENTR1.708e-3850.60Tyrosyl-tRNA synthetase, cytoplasmic OS=Xenopus tr... [more]
G4P1_YEAST4.970e-3861.43GU4 nucleic-binding protein 1 OS=Saccharomyces cer... [more]
YLF4_SCHPO2.088e-3646.43Uncharacterized tRNA-binding protein C30C2.04 OS=S... [more]
SYM_PYRAB8.249e-1746.53Methionyl-tRNA synthetase OS=Pyrococcus abyssi GN=... [more]
SYM_PYRFU1.407e-1643.56Methionyl-tRNA synthetase OS=Pyrococcus furiosus G... [more]
SYM_PYRHO2.400e-1642.57Methionyl-tRNA synthetase OS=Pyrococcus horikoshii... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736156 ID=EY736156; Name=EY736156; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGAAATGTAAGCGTTTTTTATAGAATCTTATTGTCTGTAGT
AGATGGTGGTGGAAAGAAACAAAAGTCAGCAAAATCTACAGCTGGAGCCA
AATCAAAAACCACTGCTGAACCAGAAATTTCGATTGCAAGACTTGATATC
CGTGTTGGAAAAATTACAAAAGTTCAAAAACATCCTGATGCCGATGCACT
GTATGTAGAAGAAATTGATGTGGGTGAAGTACAGCCTCGAACAGTAGTTA
GTGGCCTTGTCAAGCATATACCTCTTGAAGAGATGCAGGAGAGAATGGTC
TGTGTTCTTTGCAATCTGAAACCAGTAGCAATGAGGGGAATCAAATCACA
TGCAATGGTTCTTTGTGCTTCAACCAGTGATAACACCAAGGTTGAATTGG
TTGAGCCACCAAAATCTGCAAAAATTGGAGAAAGAGTTGCATTTCCTGGG
TTTGAAGGCGAGCCTGATGATGTGTTAAACCCTAAGAAGAAGGTTTGGGA
GACAGTGCAAGTGGATTTACACACTAACACCGAGCTGGTGGCCTGCTATA
AAGATATTCCTTTCACGACATCAGCTGGTATTTGCACTGTTTCCTCCATT
CAAAGTGGGTCTATACGGTAGCTCGACTTCTTCAATCATTGGAAAGCGAG
AATTCCTAATCTTCTGATTGTGTNAACTTTGCTTTTTTATCCTAATGACT
TTTCTCGTTGTGTGAAATGGTGTATGTGGACCAAATTTTGGTGTCAGAAT
AGACTAGATTATGTCGTGGCCTCATTAGTGTGACCTTTCCCCCCCATTAG
AAGAAAACCATTGGCTCGAACCATGGACCAGTTGAATCACGATCTTAT
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