EY736154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736154 vs. ExPASy Swiss-Prot
Match: CRTI_SOLLC (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=PDS PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.181e-16 Identity = 54/207 (26.09%), Postives = 99/207 (47.83%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLQRSKPLRRALGLXNLLYTPDAHFSCFADLAL 710 D IS DW +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI ++I KGG+ L ++I ++ + ++++ +D ++ DA+V A V K LLP W+E+ +F + LVGVPV+ V + ++ + D +LL++ + S +AD+++ Sbjct: 259 DGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKSFI-------LSDGSAIEGDAFVFAAPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFDRKLKNTYD--------------HLLFSRSSLLSVYADMSV 444
BLAST of EY736154 vs. ExPASy Swiss-Prot
Match: CRTI_CAPAN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.181e-16 Identity = 55/207 (26.57%), Postives = 96/207 (46.38%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLQRSKPLRRALGLXNLLYTPDAHFSCFADLAL 710 D IS DW +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI ++I KGG+ L ++I ++ + + ++ D ++ DA+V A V K LLP W+E+ +F + LVGVPV+ V + ++ + D NLL++ S +AD+++ Sbjct: 258 DGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKCFI-------LNDGSTIEGDAFVFATPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFDRKLKNTSD--------------NLLFSRSPLLSVYADMSV 443
BLAST of EY736154 vs. ExPASy Swiss-Prot
Match: CRTI_SOYBN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max GN=PDS1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.000e-15 Identity = 57/207 (27.54%), Postives = 97/207 (46.86%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLQRSKPLRRALGLXNLLYTPDAHFSCFADLAL 710 D +S +W +G + ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI YI GG HL ++I N + VK ++ KV++ DAYV A V +K LLP +W+ + +F + LVGVPV+ V + ++ + D +LL++ S +AD+++ Sbjct: 246 DGLSVQEWMKKQGVPERVADEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDYIQSLGGEVHLNSRIQKI----ELNDDGTVKSFLLNNG---KVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFDRKLKNTYD--------------HLLFSRSPLLSVYADMSV 431
BLAST of EY736154 vs. ExPASy Swiss-Prot
Match: CRTI_NARPS (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=PDS1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15 Identity = 55/207 (26.57%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLQRSKPLRRALGLXNLLYTPDAHFSCFADLAL 710 D ++ ++W +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI +I GGR L ++I + + +V G + ++ DAYV A V +K LLP WRE+ +F + LVGVPV+ V + ++ + D +LL+T S +AD+++ Sbjct: 245 DGLTVTEWMRRQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGRAQLNSRLQKIELNPDGTVKHFVLG-------NGNIITGDAYVVAAPVDILKLLLPQEWREIPYFQKLDKLVGVPVINVHIWFDRKLKNTYD--------------HLLFTRSPLLSVYADMSV 430
BLAST of EY736154 vs. ExPASy Swiss-Prot
Match: CRTI_MAIZE (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15 Identity = 56/207 (27.05%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLQRSKPLRRALGLXNLLYTPDAHFSCFADLAL 710 D ++ S+W +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI +I +GG L ++I N + VK A+S T + DAYV A V K L+P W E+ +F + LVGVPV+ V + ++ + D +LL++ + S +AD+++ Sbjct: 244 DGLTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSRGGEVRLNSRIKKI----ELNPDGTVKHFALSDGTQ---ITGDAYVCATPVDIFKLLVPQEWSEITYFKKLEKLVGVPVINVHIWFDRKLNNTYD--------------HLLFSRSSLLSVYADMSV 429
BLAST of EY736154 vs. ExPASy Swiss-Prot
Match: CRTI_ARATH (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=PDS PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14 Identity = 53/207 (25.60%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLQRSKPLRRALGLXNLLYTPDAHFSCFADLAL 710 D +S +W +G + ++ ++ AL FI+ D +S +C+L F + S + L G+P L P+ +I GG L ++I + ++++ T+ V+ DAYV A V +K LLP W+E+ +F + LVGVPV+ V + ++ + D +LL++ S +AD++L Sbjct: 240 DGLSVKEWMEKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGTVKSFL-------LTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYD--------------HLLFSRSNLLSVYADMSL 425
BLAST of EY736154 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSJ (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica GN=PDS PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 3.217e-14 Identity = 55/207 (26.57%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLQRSKPLRRALGLXNLLYTPDAHFSCFADLAL 710 D + S+W +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI ++ GG L ++I N + VK A+ TD + DAYV A V +K L+P W+E+ +F + LVGVPV+ V + ++ + D +LL++ + S +AD+++ Sbjct: 252 DGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKI----ELNPDGTVKHFAL---TDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYD--------------HLLFSRSSLLSVYADMSV 437
BLAST of EY736154 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSI (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. indica GN=PDS1 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 3.217e-14 Identity = 55/207 (26.57%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLQRSKPLRRALGLXNLLYTPDAHFSCFADLAL 710 D + S+W +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI ++ GG L ++I N + VK A+ TD + DAYV A V +K L+P W+E+ +F + LVGVPV+ V + ++ + D +LL++ + S +AD+++ Sbjct: 252 DGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKI----ELNPDGTVKHFAL---TDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYD--------------HLLFSRSSLLSVYADMSV 437 The following BLAST results are available for this feature:
BLAST of EY736154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736154 ID=EY736154; Name=EY736154; organism=Citrus sinensis; type=EST; length=896bpback to top |