EY736153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: CRTI_SOYBN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max GN=PDS1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.930e-14 Identity = 48/162 (29.63%), Postives = 78/162 (48.15%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTV 575 D +S +W +G + ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI YI GG HL ++I N + VK ++ KV++ DAYV V +K LP +W+ + +F +D L+GV V+ V Sbjct: 246 DGLSVQEWMKKQGVPERVADEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDYIQSLGGEVHLNSRIQKI----ELNDDGTVKSFLLNNG---KVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINV 400
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: CRTI_SOLLC (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=PDS PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.930e-14 Identity = 44/162 (27.16%), Postives = 79/162 (48.77%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTV 575 D IS DW +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI ++I KGG+ L ++I ++ + ++++ +D ++ DA+V V K LP W+E+ +F ++ L+GV V+ V Sbjct: 259 DGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKSFI-------LSDGSAIEGDAFVFAAPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINV 413
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: CRTI_CAPAN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.016e-13 Identity = 44/162 (27.16%), Postives = 77/162 (47.53%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTV 575 D IS DW +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI ++I KGG+ L ++I ++ + + ++ D ++ DA+V V K LP W+E+ +F ++ L+GV V+ V Sbjct: 258 DGISVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKCFI-------LNDGSTIEGDAFVFATPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINV 412
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: CRTI_NARPS (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=PDS1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.662e-13 Identity = 45/162 (27.78%), Postives = 76/162 (46.91%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTV 575 D ++ ++W +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI +I GGR L ++I + + +V G + ++ DAYV V +K LP WRE+ +F +D L+GV V+ V Sbjct: 245 DGLTVTEWMRRQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGRAQLNSRLQKIELNPDGTVKHFVLG-------NGNIITGDAYVVAAPVDILKLLLPQEWREIPYFQKLDKLVGVPVINV 399
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: CRTI_ARATH (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=PDS PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.707e-12 Identity = 43/162 (26.54%), Postives = 76/162 (46.91%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTV 575 D +S +W +G + ++ ++ AL FI+ D +S +C+L F + S + L G+P L P+ +I GG L ++I + ++++ T+ V+ DAYV V +K LP W+E+ +F +D L+GV V+ V Sbjct: 240 DGLSVKEWMEKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGTVKSFL-------LTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINV 394
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: CRTI_MAIZE (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.803e-12 Identity = 46/162 (28.40%), Postives = 75/162 (46.30%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTV 575 D ++ S+W +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI +I +GG L ++I N + VK A+S T + DAYV V K +P W E+ +F ++ L+GV V+ V Sbjct: 244 DGLTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSRGGEVRLNSRIKKI----ELNPDGTVKHFALSDGTQ---ITGDAYVCATPVDIFKLLVPQEWSEITYFKKLEKLVGVPVINV 398
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSJ (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica GN=PDS PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11 Identity = 45/162 (27.78%), Postives = 75/162 (46.30%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTV 575 D + S+W +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI ++ GG L ++I N + VK A+ TD + DAYV V +K +P W+E+ +F ++ L+GV V+ V Sbjct: 252 DGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKI----ELNPDGTVKHFAL---TDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINV 406
BLAST of EY736153 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSI (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. indica GN=PDS1 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11 Identity = 45/162 (27.78%), Postives = 75/162 (46.30%), Query Frame = 3 Query: 90 DSISFSDWFLSKGGTQTSIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAGCDVPGIKKWLPSSWREMKFFNHMDALMGVAVVTV 575 D + S+W +G ++ ++ AL FI+ D +S +C+L F + S + L G+P L PI ++ GG L ++I N + VK A+ TD + DAYV V +K +P W+E+ +F ++ L+GV V+ V Sbjct: 252 DGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKI----ELNPDGTVKHFAL---TDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINV 406 The following BLAST results are available for this feature:
BLAST of EY736153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736153 ID=EY736153; Name=EY736153; organism=Citrus sinensis; type=EST; length=880bpback to top |