EY736111
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 3.878e-67 Identity = 110/154 (71.43%), Postives = 125/154 (81.17%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS+ISS VAT R ++AQASMVAPF GLKS+ +FP + K N DITSIASNGGRVQCM+VWPP G KK+ETLSYLP L+DE LLKEI YLL GW+PCLEFE E G+VYRE+H+SP YYDGRYWTMWKLPM+GCTDATQVL E+ P Sbjct: 1 MASSVISSAAVAT--RTNVAQASMVAPFNGLKSAVSFPVSSKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYP 152 HSP 2 Score: 47.7506 bits (112), Expect = 3.878e-67 Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP++++RIIG + RQVQCISF+A KPPG Sbjct: 146 EAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 5.057e-67 Identity = 110/154 (71.43%), Postives = 127/154 (82.47%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YLL++GW+PCLEFE E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 152 HSP 2 Score: 44.669 bits (104), Expect = 5.057e-67 Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP ++VRIIG + RQVQCISF+A KP G Sbjct: 146 EAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 6.594e-67 Identity = 109/154 (70.78%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT RA+ AQASMV PFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSIVSSAAVAT--RANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152 HSP 2 Score: 44.2838 bits (103), Expect = 6.594e-67 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP +++RIIG + RQVQCISF+A KP G Sbjct: 146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 1.121e-66 Identity = 109/154 (70.78%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152 HSP 2 Score: 44.2838 bits (103), Expect = 1.121e-66 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP +++RIIG + RQVQCISF+A KP G Sbjct: 146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 1.121e-66 Identity = 109/154 (70.78%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152 HSP 2 Score: 44.2838 bits (103), Expect = 1.121e-66 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP +++RIIG + RQVQCISF+A KP G Sbjct: 146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 7.189e-66 Identity = 107/147 (72.79%), Postives = 127/147 (86.39%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQA-SMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEV 455 MASS+ISS VAT R ++ QA SM+APFTGLKS++ FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP L+DE LLKE+ YLL++GW+PCLEFE E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV Sbjct: 1 MASSVISSAAVAT--RTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 145 HSP 2 Score: 44.2838 bits (103), Expect = 7.189e-66 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP +++RIIG + RQVQCISF+A KP G Sbjct: 147 ECKKSYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS_TOBAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana tabacum GN=RBCS PE=1 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 7.191e-66 Identity = 107/154 (69.48%), Postives = 128/154 (83.12%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL E+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152 HSP 2 Score: 44.2838 bits (103), Expect = 7.191e-66 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP +++RIIG + RQVQCISF+A KP G Sbjct: 146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS1_NICSY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 7.191e-66 Identity = 107/154 (69.48%), Postives = 128/154 (83.12%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL E+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152 HSP 2 Score: 44.2838 bits (103), Expect = 7.191e-66 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP +++RIIG + RQVQCISF+A KP G Sbjct: 146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 9.377e-66 Identity = 110/154 (71.43%), Postives = 128/154 (83.12%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT R++ AQASMVAPFTGLKS+++FP ++KTN DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LS E LL EI YLL++GW+PCLEFE E G+VYREH SSPGYYDGRYWTMWKLPM+GCTDATQV EV P Sbjct: 1 MASSIMSSAAVAT--RSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYP 152 HSP 2 Score: 41.2022 bits (95), Expect = 9.377e-66 Identity = 19/32 (59.38%), Postives = 23/32 (71.88%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKP 555 E K YP + +RIIG + RQVQCISF+A KP Sbjct: 146 EAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.222e-65 Identity = 109/154 (70.78%), Postives = 125/154 (81.17%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++S+ TVAT A+ AQASM+A F GLKS+++FP T+K + DITSIASNGGRV+CM VWPP KK+ETLSYLP LSDE LLKEI YLL+ GW+PCLEFE E G+VYREHH SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSVMSTATVATG--ANAAQASMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYP 152 HSP 2 Score: 42.3578 bits (98), Expect = 1.222e-65 Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKP 555 E K YP +++RIIG + RQVQCISF+A KP Sbjct: 146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177 The following BLAST results are available for this feature:
BLAST of EY736111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736111 ID=EY736111; Name=EY736111; organism=Citrus sinensis; type=EST; length=889bpback to top |