EY736111

Overview
NameEY736111
Unique NameEY736111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 3.878e-67
Identity = 110/154 (71.43%), Postives = 125/154 (81.17%), Query Frame = 3
Query:   18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479
            MASS+ISS  VAT  R ++AQASMVAPF GLKS+ +FP + K N DITSIASNGGRVQCM+VWPP G KK+ETLSYLP L+DE LLKEI YLL  GW+PCLEFE E G+VYRE+H+SP YYDGRYWTMWKLPM+GCTDATQVL E+       P
Sbjct:    1 MASSVISSAAVAT--RTNVAQASMVAPFNGLKSAVSFPVSSKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYP 152          

HSP 2 Score: 47.7506 bits (112), Expect = 3.878e-67
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 1
Query:  460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561
            E  K YP++++RIIG  + RQVQCISF+A KPPG
Sbjct:  146 EAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179          
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 5.057e-67
Identity = 110/154 (71.43%), Postives = 127/154 (82.47%), Query Frame = 3
Query:   18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479
            MASS++SS  VAT  R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV CM+VWPP  +KK+ETLSYLP LSDE LL EI YLL++GW+PCLEFE E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV       P
Sbjct:    1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 152          

HSP 2 Score: 44.669 bits (104), Expect = 5.057e-67
Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 1
Query:  460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561
            E  K YP ++VRIIG  + RQVQCISF+A KP G
Sbjct:  146 EAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179          
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 6.594e-67
Identity = 109/154 (70.78%), Postives = 129/154 (83.77%), Query Frame = 3
Query:   18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479
            MASS++SS  VAT  RA+ AQASMV PFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP  +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV       P
Sbjct:    1 MASSIVSSAAVAT--RANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152          

HSP 2 Score: 44.2838 bits (103), Expect = 6.594e-67
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1
Query:  460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561
            E  K YP +++RIIG  + RQVQCISF+A KP G
Sbjct:  146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179          
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 1.121e-66
Identity = 109/154 (70.78%), Postives = 129/154 (83.77%), Query Frame = 3
Query:   18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479
            MASS++SS  VAT  R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP  +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV       P
Sbjct:    1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152          

HSP 2 Score: 44.2838 bits (103), Expect = 1.121e-66
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1
Query:  460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561
            E  K YP +++RIIG  + RQVQCISF+A KP G
Sbjct:  146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179          
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 1.121e-66
Identity = 109/154 (70.78%), Postives = 129/154 (83.77%), Query Frame = 3
Query:   18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479
            MASS++SS  VAT  R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP  +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV       P
Sbjct:    1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152          

HSP 2 Score: 44.2838 bits (103), Expect = 1.121e-66
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1
Query:  460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561
            E  K YP +++RIIG  + RQVQCISF+A KP G
Sbjct:  146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179          
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 7.189e-66
Identity = 107/147 (72.79%), Postives = 127/147 (86.39%), Query Frame = 3
Query:   18 MASSMISSTTVATANRASLAQA-SMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEV 455
            MASS+ISS  VAT  R ++ QA SM+APFTGLKS++ FP ++K N DITSIASNGGRV+CM+VWPP  +KK+ETLSYLP L+DE LLKE+ YLL++GW+PCLEFE E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV
Sbjct:    1 MASSVISSAAVAT--RTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 145          

HSP 2 Score: 44.2838 bits (103), Expect = 7.189e-66
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1
Query:  460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561
            E  K YP +++RIIG  + RQVQCISF+A KP G
Sbjct:  147 ECKKSYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180          
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS_TOBAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana tabacum GN=RBCS PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 7.191e-66
Identity = 107/154 (69.48%), Postives = 128/154 (83.12%), Query Frame = 3
Query:   18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479
            MASS++SS  VAT  R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP   KK+ETLSYLP LS E LL E+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV       P
Sbjct:    1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152          

HSP 2 Score: 44.2838 bits (103), Expect = 7.191e-66
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1
Query:  460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561
            E  K YP +++RIIG  + RQVQCISF+A KP G
Sbjct:  146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179          
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS1_NICSY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 7.191e-66
Identity = 107/154 (69.48%), Postives = 128/154 (83.12%), Query Frame = 3
Query:   18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479
            MASS++SS  VAT  R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP   KK+ETLSYLP LS E LL E+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV       P
Sbjct:    1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152          

HSP 2 Score: 44.2838 bits (103), Expect = 7.191e-66
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1
Query:  460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561
            E  K YP +++RIIG  + RQVQCISF+A KP G
Sbjct:  146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179          
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 9.377e-66
Identity = 110/154 (71.43%), Postives = 128/154 (83.12%), Query Frame = 3
Query:   18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479
            MASS++SS  VAT  R++ AQASMVAPFTGLKS+++FP ++KTN DITSIASNGGRV+CM+VWPP  +KK+ETLSYLP LS E LL EI YLL++GW+PCLEFE E G+VYREH SSPGYYDGRYWTMWKLPM+GCTDATQV  EV       P
Sbjct:    1 MASSIMSSAAVAT--RSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYP 152          

HSP 2 Score: 41.2022 bits (95), Expect = 9.377e-66
Identity = 19/32 (59.38%), Postives = 23/32 (71.88%), Query Frame = 1
Query:  460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKP 555
            E  K YP + +RIIG  + RQVQCISF+A KP
Sbjct:  146 EAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177          
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.222e-65
Identity = 109/154 (70.78%), Postives = 125/154 (81.17%), Query Frame = 3
Query:   18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479
            MASS++S+ TVAT   A+ AQASM+A F GLKS+++FP T+K + DITSIASNGGRV+CM VWPP   KK+ETLSYLP LSDE LLKEI YLL+ GW+PCLEFE E G+VYREHH SPGYYDGRYWTMWKLPM+GCTDATQVL EV       P
Sbjct:    1 MASSVMSTATVATG--ANAAQASMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYP 152          

HSP 2 Score: 42.3578 bits (98), Expect = 1.222e-65
Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKP 555
            E  K YP +++RIIG  + RQVQCISF+A KP
Sbjct:  146 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177          
The following BLAST results are available for this feature:
BLAST of EY736111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
RBS1_PETHY3.878e-6771.43Ribulose bisphosphate carboxylase small chain SSU8... [more]
RBS3A_SOLLC5.057e-6771.43Ribulose bisphosphate carboxylase small chain 3A/3... [more]
RBSB_SOLTU6.594e-6770.78Ribulose bisphosphate carboxylase small chain 2B, ... [more]
RBSC_SOLTU1.121e-6670.78Ribulose bisphosphate carboxylase small chain 2C, ... [more]
RBSA_SOLTU1.121e-6670.78Ribulose bisphosphate carboxylase small chain 2A, ... [more]
RBS1_SOLTU7.189e-6672.79Ribulose bisphosphate carboxylase small chain 1, c... [more]
RBS_TOBAC7.191e-6669.48Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS1_NICSY7.191e-6669.48Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_STELP9.377e-6671.43Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_CAPAN1.222e-6570.78Ribulose bisphosphate carboxylase small chain, chl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-B02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736111 ID=EY736111; Name=EY736111; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGTACCAATGGCTTCCTCAATGATCTCATCGACCACCGTT
GCCACCGCGAACCGCGCCAGCCTTGCTCAGGCCAGCATGGTCGCCCCCTT
CACCGGCCTCAAGTCTTCTTCTGCTTTCCCAGCAACCAAGAAGACCAACA
ATGACATTACTTCCATTGCAAGCAACGGCGGAAGAGTCCAATGCATGAAG
GTGTGGCCACCAACTGGCTTGAAGAAGTTCGAGACTCTCTCATACCTCCC
GCCACTGTCCGATGAAGCTTTGCTCAAGGAAATCAGTTACCTTCTCCGCT
CCGGCTGGATTCCCTGCTTGGAATTCGAGTTGGAGAAAGGATGGGTGTAC
CGTGAGCACCACAGCTCACCAGGATACTACGATGGACGCTACTGGACAAT
GTGGAAGCTGCCCATGTATGGGTGCACAGATGCAACCCAGGTTTTGAAGG
AGGTTNGGGGAGGTCCANAAGGAATACCCACATTCATTCGTCCGAATTAT
CGGATNNTGACACAAGCGTCAAGTGCAGTGCATCAGTTTCCTTGCTGCCA
AGCCACCAGGCGTCTAGGTTCCCAATTAAATGTGTGTAACCACCCATGCA
AAATTGTTGATTATTATTATGGTGTAACCCCCATAATGATCATTCGATCA
NTGGGGGGGTTCGGGTTGGCGTTTAATTTGGACTTAGGCCGGTTGTTGCT
GCTGCTCAGACCTTTTGTGGGTCTCTCCCCGAATTTTGGCTTTTTTTTTA
TATATATTTTAATAAATGGAATCCTTTGTTCCCAGCTCCATCAATCTGGG
TCCCGGATGTTCAGTTAAGGAGGTTAGAGTGTCTGGAATTTAGAAAACAA
AAAAAGGGGGGCCGCTCTTCAAGGATCCATCCTCGCTCT
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