EY736102

Overview
NameEY736102
Unique NameEY736102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736102 vs. ExPASy Swiss-Prot
Match: TDH_AERHH (L-threonine 3-dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=tdh PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.491e-18
Identity = 50/131 (38.17%), Postives = 72/131 (54.96%), Query Frame = 3
Query:  288 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEGRAMCDP 677
            P LG  D+L++++   ICG+D+H       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC   +      P  G+ A  +V PA   FKLPDNV  E  A+ DP
Sbjct:   21 PELGHNDLLIKIRKTAICGTDIHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVRGFAVGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRP--GAFAEYLVIPAFNAFKLPDNVPDELAAIFDP 149          
BLAST of EY736102 vs. ExPASy Swiss-Prot
Match: TDH_SALTI (L-threonine 3-dehydrogenase OS=Salmonella typhi GN=tdh PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.619e-17
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  288 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEGRAMCDP 677
            P +G  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            G  A  +V PA   FK+PDN+S +  ++ DP
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNR-PGCFAEYLVIPAFNAFKIPDNISDDLASIFDP 149          
BLAST of EY736102 vs. ExPASy Swiss-Prot
Match: TDH_CITK8 (L-threonine 3-dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=tdh PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.619e-17
Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = 3
Query:  285 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEGRAMCDP 677
            +P +G  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  G  A  +V PA   FK+PDN+S +  ++ DP
Sbjct:   20 VPEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFRIGDRVSGEGHITCGHCRNCRGGRTHLCRNTLGVGVNRP--GCFAEYLVLPAFNAFKIPDNISDDLASIFDP 149          
BLAST of EY736102 vs. ExPASy Swiss-Prot
Match: TDH_VIBPA (L-threonine 3-dehydrogenase OS=Vibrio parahaemolyticus GN=tdh PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17
Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  288 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEGRAMCDP 677
            P +G  D+L+++K   ICG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G+ A  +V PA   FK+PD +S +  ++ DP
Sbjct:   23 PEVGHNDILIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNR-EGAFAEYLVIPAFNAFKIPDEISDDLASIFDP 151          
BLAST of EY736102 vs. ExPASy Swiss-Prot
Match: TDH_SALAR (L-threonine 3-dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=tdh PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  288 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEGRAMCDP 677
            P +G  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            G  A  +V PA   FK+PDN+S +  ++ DP
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNR-PGCFAEYLVIPAFNAFKIPDNISDDLASIFDP 149          
BLAST of EY736102 vs. ExPASy Swiss-Prot
Match: TDH_ENTS8 (L-threonine 3-dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=tdh PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  288 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEGRAMCDP 677
            P +G  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            G  A  +V PA   FK+PDN+S +  ++ DP
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNR-PGCFAEYLVIPAFNAFKIPDNISDDLASIFDP 149          
BLAST of EY736102 vs. ExPASy Swiss-Prot
Match: TDH_ENT38 (L-threonine 3-dehydrogenase OS=Enterobacter sp. (strain 638) GN=tdh PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  288 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEGRAMCDP 677
            P +G  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            G  A  +V PA   FK+PDN+S +  ++ DP
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNR-PGCFAEYLVIPAFNAFKIPDNISDDLASIFDP 149          
BLAST of EY736102 vs. ExPASy Swiss-Prot
Match: TDH_VIBCM (L-threonine 3-dehydrogenase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=tdh PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17
Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  282 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEGRAMCDP 677
            ++P LG  D+L+++K   ICG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G  +  +V PA   FK+PD +S +  ++ DP
Sbjct:   21 DMPELGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFQIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPDGISDDLASIFDP 151          
BLAST of EY736102 vs. ExPASy Swiss-Prot
Match: TDH_VIBCH (L-threonine 3-dehydrogenase OS=Vibrio cholerae GN=tdh PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17
Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  282 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEGRAMCDP 677
            ++P LG  D+L+++K   ICG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G  +  +V PA   FK+PD +S +  ++ DP
Sbjct:   21 DMPELGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFQIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPDGISDDLASIFDP 151          
BLAST of EY736102 vs. ExPASy Swiss-Prot
Match: TDH_VIBC3 (L-threonine 3-dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=tdh PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17
Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  282 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEGRAMCDP 677
            ++P LG  D+L+++K   ICG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G  +  +V PA   FK+PD +S +  ++ DP
Sbjct:   21 DMPELGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFQIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPDGISDDLASIFDP 151          
The following BLAST results are available for this feature:
BLAST of EY736102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
TDH_AERHH9.491e-1838.17L-threonine 3-dehydrogenase OS=Aeromonas hydrophil... [more]
TDH_SALTI1.619e-1736.92L-threonine 3-dehydrogenase OS=Salmonella typhi GN... [more]
TDH_CITK81.619e-1737.12L-threonine 3-dehydrogenase OS=Citrobacter koseri ... [more]
TDH_VIBPA2.114e-1736.15L-threonine 3-dehydrogenase OS=Vibrio parahaemolyt... [more]
TDH_SALAR2.114e-1736.92L-threonine 3-dehydrogenase OS=Salmonella arizonae... [more]
TDH_ENTS82.114e-1736.92L-threonine 3-dehydrogenase OS=Enterobacter sakaza... [more]
TDH_ENT382.114e-1736.92L-threonine 3-dehydrogenase OS=Enterobacter sp. (s... [more]
TDH_VIBCM2.761e-1735.61L-threonine 3-dehydrogenase OS=Vibrio cholerae ser... [more]
TDH_VIBCH2.761e-1735.61L-threonine 3-dehydrogenase OS=Vibrio cholerae GN=... [more]
TDH_VIBC32.761e-1735.61L-threonine 3-dehydrogenase OS=Vibrio cholerae ser... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-A03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736102 ID=EY736102; Name=EY736102; organism=Citrus sinensis; type=EST; length=830bp
CACGCGTCCGCAGAAATCAATCATCTACGCGGATAAATACAAGAACACTT
GATGTTATTCCTGCGGCCGAATCAAATCATATCCCATATCCAGAATCAGA
ATAAATGGTAGCTTAAAATGTTGTGTACAGAGTGAAGTCTCTTCTGTGCA
CTTGTGTTTTTGAAGGGTAAAAAGCAAATATGGGCAAAGGAGGGATGTCA
CAAGGAGAAAAGAAGGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTAT
GGGTGTCAACACCCTCAAGATTCAACCTTTTGAGCTTCCTTCTCTGGGAC
CATATGATGTTTTAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGAT
GTGCATTATCTCAAGACCTTGAGGTGTGCCGATTTTGTTGTGAAAGAGCC
TATGGTGATTGGGCACGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCG
AGGTGAAGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCCGGGATC
AGCTGCTGGCGATGCGATCACTGCAAAGGAGGTCGATACAATTTGTGTCC
AGAGATGAAATTTTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATC
AGGTGGTGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGC
CTGGAGGGAAGGGCTATGTGTGACCCCTTGAGTGTGGGTCTTCTGGCCTG
GCGGCGTGCCAATATCGGGCCCTGAGACAAATGTTGTTATTATGGGAACC
AGGGCCCATACGACTTCTCCCAATGCTCAAGAGCTCGTGCTCTTTGCGAG
CTCCTAGAATGGCCATTGGGGGCTGTGGCG
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